Skip to content

Conversation

@pull
Copy link

@pull pull bot commented Aug 23, 2025

See Commits and Changes for more details.


Created by pull[bot] (v2.0.0-alpha.3)

Can you help keep this open source service alive? 💖 Please sponsor : )

QuentinCody and others added 18 commits August 20, 2025 17:34
- Add CIViC MCP server for clinical variant interpretation
- Add DataCite MCP server for research data and publication metadata
- Add DGIdb MCP server for drug-gene interaction data
- Add Entrez MCP server for NCBI biomedical databases
- Add NCI GDC MCP server for cancer genomic data
- Add OpenNeuro MCP server for open neuroimaging datasets
- Add Open Targets MCP server for target-disease associations
- Add Pharos MCP server for target, drug, and disease information
- Add RCSB PDB MCP server for 3D protein structures
- Add UniProt MCP server for protein sequence and functional data
- Add Wikidata SPARQL MCP server for structured knowledge queries
- Add ZincBind MCP server for zinc binding sites in proteins

All servers added in alphabetical order following contribution guidelines.
Add MCP Context Provider to the Third-Party Servers section in alphabetical order. This server provides AI models with persistent tool-specific context and rules, preventing context loss between chat sessions.
Add mcp-memory-service to the Third-Party Servers section in alphabetical order. This universal memory service provides semantic search, persistent storage, and autonomous memory consolidation for AI assistants across multiple platforms.
Voice MCP has been renamed to Voice Mode. This updates:
- Name from 'Voice MCP' to 'Voice Mode'
- GitHub URL from voice-mcp to voicemode
- Website from voice-mcp.com to voicemode.ai
Add 12 bioinformatics and research MCP servers to community section
Add MCP Context Provider and mcp-memory-service to community servers list
Add CRASH-MCP to community servers list
feat: add Data4Library MCP server to the readme
- Update documentation with directory_tree declaration
- Add excludePatterns parameter to DirectoryTreeArgsSchema
- Implement pattern exclusion in buildTree function using minimatch
- Pass excludePatterns through recursive calls
- Support both simple and glob patterns for exclusion
- Maintain consistent behavior with search_files implementation

* Add tests and fix implementation

---------

Co-authored-by: Ola Hungerford <olahungerford@gmail.com>
Co-authored-by: Adam Jones <adamj+git@anthropic.com>
Co-authored-by: Adam Jones <adamj@anthropic.com>
Co-authored-by: Adam Jones <adamj+git@anthropic.com>
Co-authored-by: Claude <noreply@anthropic.com>
Co-authored-by: Adam Jones <adamj@anthropic.com>
…ns (#2575)

Co-authored-by: Adam Jones <adamj@anthropic.com>
@pull pull bot locked and limited conversation to collaborators Aug 23, 2025
@pull pull bot added the ⤵️ pull label Aug 23, 2025
@pull pull bot merged commit 2a4b7b0 into threatcode:main Aug 23, 2025
2 checks passed
Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.

Projects

None yet

Development

Successfully merging this pull request may close these issues.

9 participants