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Colab Tutorial re-link#1146

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jhnwu3 merged 5 commits into
sunlabuiuc:masterfrom
janezdu:tutorials
May 12, 2026
Merged

Colab Tutorial re-link#1146
jhnwu3 merged 5 commits into
sunlabuiuc:masterfrom
janezdu:tutorials

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@janezdu
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@janezdu janezdu commented May 12, 2026

Contributor: Jane Du (zd16@illinois.edu)

Contribution Type: Documentation / Tutorials

Description:
Basically unbreaking the tutorial links with new ownership of Colab Notebooks on Google Drive.

  • Upload tutorials 0-7 colabs to gdrive, including the 2 previously unbroken ones (1.pyhealth.datasets, 2.pyhealth.tasks`)
  • Refreshes stale Colab URLs across the docs (Tutorial 1 datasets, Tutorial 2 tasks, Tutorial 6 tokenizer), and makes
  • Restores Tutorial 6 (pyhealth.tokenizer) which was lost in the UIUC Google Drive purge
  • adds !pip install pyhealth cells to all tutorials
  • external links in the docs open in a new tab

Files to Review:

  • examples/tutorials/tutorial_pyhealth_tokenizer.ipynb — new tutorial notebook
  • examples/tutorials/orig_tutorial_pyhealth_{tasks,datasets}.ipynb — renamed backups (_orig suffix → orig_ prefix)
  • examples/tutorials/tutorial_pyhealth_*.ipynb — added install cells + retitled duplicate "Summary" in the data tutorial
  • docs/tutorials.rst, README.rst, docs/api/{tasks,datasets}.rst — refreshed Colab IDs
  • docs/conf.py, docs/_static/external_links.js — open-external-links-in-new-tab
  • chat-assistant/corpus/*.txt — same URL refresh propagated through the chatbot corpus
  • examples/tutorial_stagenet_comprehensive.ipynb — fixed inline Colab cross-references (incl. a pre-existing typo)

@janezdu janezdu requested a review from jhnwu3 May 12, 2026 22:03
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Thank you!!!

@jhnwu3 jhnwu3 merged commit acaf7b7 into sunlabuiuc:master May 12, 2026
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@janezdu janezdu deleted the tutorials branch May 12, 2026 22:42
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2 participants