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Update doc switcher & readme doc #844

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Merged
leehart merged 3 commits into from
Jan 22, 2026
Merged

Update doc switcher & readme doc #844

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ba2ddc5
Update switcher.json
leehart Jan 16, 2026
ff8c16a
Add links to API docs for Af1, Adir1, Pf8 to README.md
leehart Jan 16, 2026
446d7d4
Avoid lint error: pd.core.series.Series is not defined
leehart Jan 16, 2026
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9 changes: 9 additions & 0 deletions README.md
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Original file line number Diff line number Diff line change
Expand Up @@ -19,9 +19,18 @@ from the following locations:
- [Ag3 API
docs](https://malariagen.github.io/malariagen-data-python/latest/Ag3.html)

- [Af1 API
docs](https://malariagen.github.io/malariagen-data-python/latest/Af1.html)

- [Amin1 API
docs](https://malariagen.github.io/malariagen-data-python/latest/Amin1.html)

- [Adir1 API
docs](https://malariagen.github.io/malariagen-data-python/latest/Adir1.html)

- [Pf8 API
docs](https://malariagen.github.io/parasite-data/pf8/api.html)

- [Pf7 API
docs](https://malariagen.github.io/parasite-data/pf7/api.html)

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60 changes: 15 additions & 45 deletions docs/source/_static/switcher.json
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Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
[
{
"name": "15.5.0",
"version": "v15.5.0",
"url": "https://malariagen.github.io/malariagen-data-python/v15.5.0/",
"name": "15.6.0",
"version": "v15.6.0",
"url": "https://malariagen.github.io/malariagen-data-python/v15.6.0/",
"preferred": true
},
{
Expand All @@ -16,65 +16,35 @@
"url": "https://malariagen.github.io/malariagen-data-python/v13.5.0/"
},
{
"name": "13.4.0",
"version": "v13.4.0",
"url": "https://malariagen.github.io/malariagen-data-python/v13.4.0/"
},
{
"name": "13.3.0",
"version": "v13.3.0",
"url": "https://malariagen.github.io/malariagen-data-python/v13.3.0/"
},
{
"name": "13.2.1",
"version": "v13.2.1",
"url": "https://malariagen.github.io/malariagen-data-python/v13.2.0/"
},
{
"name": "13.1.0",
"version": "v13.1.0",
"url": "https://malariagen.github.io/malariagen-data-python/v13.1.0/"
},
{
"name": "13.0.4",
"version": "v13.0.4",
"url": "https://malariagen.github.io/malariagen-data-python/v13.0.4/"
},
{
"name": "12.0.0",
"version": "v12.0.0",
"url": "https://malariagen.github.io/malariagen-data-python/v12.0.0/"
"name": "12.0.1",
"version": "v12.0.1",
"url": "https://malariagen.github.io/malariagen-data-python/v12.0.1/"
},
{
"name": "11.0.0",
"version": "v11.0.0",
"url": "https://malariagen.github.io/malariagen-data-python/v11.0.0/"
},
{
"name": "10.0.0",
"version": "v10.0.0",
"url": "https://malariagen.github.io/malariagen-data-python/v10.0.0/"
"name": "10.2.0",
"version": "v10.2.0",
"url": "https://malariagen.github.io/malariagen-data-python/v10.2.0/"
},
{
"name": "9.0.0",
"version": "v9.0.0",
"url": "https://malariagen.github.io/malariagen-data-python/v9.0.0/"
"name": "9.0.1",
"version": "v9.0.1",
"url": "https://malariagen.github.io/malariagen-data-python/v9.0.1/"
},
{
"name": "8.0.0",
"version": "v8.0.0",
"url": "https://malariagen.github.io/malariagen-data-python/v8.0.0/"
"name": "8.8.0",
"version": "v8.8.0",
"url": "https://malariagen.github.io/malariagen-data-python/v8.8.0/"
},
{
"name": "7.15.0",
"version": "v7.15.0",
"url": "https://malariagen.github.io/malariagen-data-python/v7.15.0/"
},
{
"name": "7.14.0",
"version": "v7.14.0",
"url": "https://malariagen.github.io/malariagen-data-python/v7.14.0/"
},
{
"version": "dev",
"url": "https://malariagen.github.io/malariagen-data-python/latest/"
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2 changes: 1 addition & 1 deletion malariagen_data/anoph/sample_metadata.py
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Original file line number Diff line number Diff line change
Expand Up @@ -1155,7 +1155,7 @@ def lookup_sample(
self,
sample: base_params.sample,
sample_set: Optional[base_params.sample_set] = None,
) -> pd.core.series.Series:
) -> pd.Series:
df_samples = self.sample_metadata(sample_sets=sample_set).set_index("sample_id")
sample_rec = None
if isinstance(sample, str):
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