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Important Review skippedAuto reviews are disabled on base/target branches other than the default branch. Please check the settings in the CodeRabbit UI or the You can disable this status message by setting the WalkthroughDocumentation was overhauled: legacy “Mathematical Notation” pages were removed and replaced with a reorganized “mathematical-notation” section, adding detailed docs on elements, features, patterns, and dimensions. Navigation was reworked in mkdocs.yml to explicit nav entries. A Storage class docstring gained a mathematical formulation block. No runtime code changes. Changes
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docs/SUMMARY.md(0 hunks)docs/user-guide/Mathematical Notation/Effects, Penalty & Objective.md(0 hunks)docs/user-guide/Mathematical Notation/Flow.md(0 hunks)docs/user-guide/Mathematical Notation/InvestParameters.md(0 hunks)docs/user-guide/Mathematical Notation/LinearConverter.md(0 hunks)docs/user-guide/Mathematical Notation/OnOffParameters.md(0 hunks)docs/user-guide/Mathematical Notation/index.md(0 hunks)docs/user-guide/mathematical-notation/dimensions.md(1 hunks)docs/user-guide/mathematical-notation/effects-penalty-objective.md(1 hunks)docs/user-guide/mathematical-notation/elements/Bus.md(1 hunks)docs/user-guide/mathematical-notation/elements/Flow.md(1 hunks)docs/user-guide/mathematical-notation/elements/LinearConverter.md(1 hunks)docs/user-guide/mathematical-notation/elements/Storage.md(2 hunks)docs/user-guide/mathematical-notation/features/InvestParameters.md(1 hunks)docs/user-guide/mathematical-notation/features/OnOffParameters.md(1 hunks)docs/user-guide/mathematical-notation/index.md(1 hunks)docs/user-guide/mathematical-notation/modeling-patterns/bounds-and-states.md(1 hunks)docs/user-guide/mathematical-notation/modeling-patterns/duration-tracking.md(1 hunks)docs/user-guide/mathematical-notation/modeling-patterns/index.md(1 hunks)docs/user-guide/mathematical-notation/modeling-patterns/state-transitions.md(1 hunks)flixopt/components.py(1 hunks)mkdocs.yml(1 hunks)
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- docs/user-guide/Mathematical Notation/index.md
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- docs/user-guide/Mathematical Notation/InvestParameters.md
- docs/user-guide/Mathematical Notation/Effects, Penalty & Objective.md
- docs/user-guide/Mathematical Notation/OnOffParameters.md
- docs/user-guide/Mathematical Notation/LinearConverter.md
- docs/user-guide/Mathematical Notation/Flow.md
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| timesteps = pd.date_range('2020-01-01', periods=24, freq='h') | ||
| scenarios = pd.Index(['Base Case', 'High Demand']) | ||
| periods = pd.Index([2020, 2021, 2022]) | ||
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| flow_system = fx.FlowSystem( | ||
| timesteps=timesteps, | ||
| periods=periods, | ||
| scenarios=scenarios, | ||
| weights=np.array([0.5, 0.5]) # Scenario weights | ||
| ) |
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Fix the 3D weights example
Line 214 describes that weights must be a 2D array with shape (n_periods, n_scenarios) when both periods and scenarios are present, but the example on Lines 47‑56 only passes a length‑2 vector. That configuration will either be rejected by FlowSystem or silently misweight periods. Please update the snippet to showcase the proper matrix-shaped weights, e.g. a (3, 2) array for three periods and two scenarios.
weights=np.array([0.5, 0.5]) # Scenario weights
+# Period × Scenario weights (3 periods × 2 scenarios)
+weights=np.array([
+ [0.5, 0.5], # 2020
+ [0.3, 0.7], # 2021
+ [0.6, 0.4], # 2022
+])Committable suggestion skipped: line range outside the PR's diff.
🤖 Prompt for AI Agents
In docs/user-guide/mathematical-notation/dimensions.md around lines 47–56, the
example passes a 1D weights vector of length 2 while the text (line 214)
requires a 2D weights array with shape (n_periods, n_scenarios); update the
snippet to supply a (3, 2) numpy array (matching periods=3 and scenarios=2) so
weights = np.array([[...], [...], [...]]) with explicit rows per period and two
columns per scenario, ensuring the array shape is (3, 2) before constructing the
FlowSystem.
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| **Python Class:** [`Storage`][flixopt.components.Storage] | ||
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| **Key Parameters:** | ||
| - `size`: Storage capacity $\text{C}$ | ||
| - `relative_loss_per_hour`: Self-discharge rate $\dot{\text{c}}_\text{rel,loss}$ | ||
| - `charge_state_start`: Initial charge $c(\text{t}_0)$ | ||
| - `charge_state_end`: Final charge target $c(\text{t}_\text{end})$ (optional) | ||
| - `eta_charge`, `eta_discharge`: Charging/discharging efficiencies $\eta_\text{in}, \eta_\text{out}$ | ||
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| See the [`Storage`][flixopt.components.Storage] API documentation for complete parameter list and usage examples. |
Contributor
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Align “Key Parameters” with the actual Storage API.
The listed names (size, charge_state_start, charge_state_end) don’t exist on Storage; the constructor exposes capacity_in_flow_hours, initial_charge_state, minimal_final_charge_state, maximal_final_charge_state, etc. This mismatch will mislead users reading the math docs. Please rename the bullets to the real parameter names (and adjust descriptions) so the section reflects the public API.
🤖 Prompt for AI Agents
In docs/user-guide/mathematical-notation/elements/Storage.md around lines 62 to
71, the "Key Parameters" list uses outdated/internal names (size,
charge_state_start, charge_state_end) that don't match the Storage public API;
update the bullets to use the actual constructor parameter names (e.g.,
capacity_in_flow_hours, initial_charge_state, minimal_final_charge_state and/or
maximal_final_charge_state) and adjust the short descriptions to reflect their
meanings (capacity, initial charge, optional final charge bounds), keep the
Greek/math symbols consistent with the descriptions, and ensure the README
references the Storage API link remains intact.
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| $$\label{eq:onoff_min_on_duration} | ||
| d^\text{on}(t) \geq (s(t-1) - s(t)) \cdot h^\text{on}_\text{min} \quad \forall t > 0 | ||
| $$ | ||
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| With: | ||
| - $d^\text{on}(t)$ being the consecutive on-time duration | ||
| - $h^\text{on}_\text{min}$ being the minimum required on-time | ||
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| **Behavior:** | ||
| - When shutting down: enforces equipment was on for at least $h^\text{on}_\text{min}$ | ||
| - Prevents short cycling and frequent startups | ||
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| **Maximum Consecutive On-Time:** | ||
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| Limits continuous operation before requiring shutdown: | ||
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| $$\label{eq:onoff_max_on_duration} | ||
| d^\text{on}(t) \leq h^\text{on}_\text{max} \quad \forall t | ||
| $$ | ||
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| **Use cases:** | ||
| - Mandatory maintenance intervals | ||
| - Process batch time limits | ||
| - Thermal cycling requirements | ||
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| --- | ||
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| ### Consecutive Shutdown Hours | ||
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| **Minimum Consecutive Off-Time:** | ||
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| Enforces minimum shutdown duration before restarting: | ||
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| $$\label{eq:onoff_min_off_duration} | ||
| d^\text{off}(t) \geq (s(t) - s(t-1)) \cdot h^\text{off}_\text{min} \quad \forall t > 0 | ||
| $$ | ||
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Contributor
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Correct the minimum on/off duration formulas
With the current forms,
- Line 112: when the unit shuts down (
s(t-1)=1,s(t)=0), the RHS becomesh_on_min, yet the upper-bound pattern forcesdᵒⁿ(t)=0, making the inequality infeasible. - Line 145: when the unit starts (
s(t-1)=0,s(t)=1), the RHS becomesh_off_min, butdᵒᶠᶠ(t)is simultaneously constrained to zero.
Both constraints need to look at the duration accumulated before the switch to enforce the minimum run/off time:
-dᵒⁿ(t) ≥ (s(t-1) - s(t)) · hᵒⁿ_min
+dᵒⁿ(t-1) ≥ (s(t-1) - s(t)) · hᵒⁿ_min
…
-dᵒᶠᶠ(t) ≥ (s(t) - s(t-1)) · hᵒᶠᶠ_min
+dᵒᶠᶠ(t-1) ≥ (s(t) - s(t-1)) · hᵒᶠᶠ_minPlease update the documentation accordingly so readers can implement feasible constraints.
Committable suggestion skipped: line range outside the PR's diff.
🤖 Prompt for AI Agents
In docs/user-guide/mathematical-notation/features/OnOffParameters.md around
lines 111 to 147, the minimum on/off duration constraints reference the current
duration at time t and become infeasible at transition instants; change them to
reference the duration accumulated before the switch (t-1). Specifically,
replace the minimum-on constraint with one that enforces d^on(t-1) >=
(s(t-1)-s(t)) * h^on_min for all t>0, and replace the minimum-off constraint
with d^off(t-1) >= (s(t)-s(t-1)) * h^off_min for all t>0, keeping the transition
indicator terms and the t>0 domain so implementers enforce minimum elapsed time
prior to the state change.
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| $$\label{eq:minimum_duration} | ||
| d(t) \geq (s(t-1) - s(t)) \cdot d_\text{min}(t-1) \quad \forall t > 0 | ||
| $$ | ||
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| With: | ||
| - $d_\text{min}(t)$ being the required minimum duration at time $t$ | ||
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| **Behavior:** | ||
| - When shutting down ($s(t-1) = 1, s(t) = 0$): enforces $d(t-1) \geq d_\text{min}(t-1)$ | ||
| - This ensures the state was active for at least $d_\text{min}$ before turning off | ||
| - When state is constant or turning on: constraint is non-binding | ||
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Contributor
There was a problem hiding this comment.
Fix the minimum duration inequality
At shutdown (s(t-1)=1, s(t)=0) the RHS becomes d_min(t-1), yet earlier constraints enforce d(t)=0, so Line 88 cannot be satisfied. The minimum-duration check needs to reference the previous duration value:
-d(t) ≥ (s(t-1) - s(t)) · d_min(t-1)
+d(t-1) ≥ (s(t-1) - s(t)) · d_min(t-1)Please update the formulation to avoid documenting an infeasible constraint.
📝 Committable suggestion
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Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
Suggested change
| $$\label{eq:minimum_duration} | |
| d(t) \geq (s(t-1) - s(t)) \cdot d_\text{min}(t-1) \quad \forall t > 0 | |
| $$ | |
| With: | |
| - $d_\text{min}(t)$ being the required minimum duration at time $t$ | |
| **Behavior:** | |
| - When shutting down ($s(t-1) = 1, s(t) = 0$): enforces $d(t-1) \geq d_\text{min}(t-1)$ | |
| - This ensures the state was active for at least $d_\text{min}$ before turning off | |
| - When state is constant or turning on: constraint is non-binding | |
| $$\label{eq:minimum_duration} | |
| d(t-1) \geq (s(t-1) - s(t)) \cdot d_\text{min}(t-1) \quad \forall t > 0 | |
| $$ |
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| Mathematical Formulation: | ||
| See the complete mathematical model in the documentation: | ||
| `Storage.md <docs/user-guide/Mathematical Notation/Storage.md>`_ | ||
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| - Equation (1): Charge state bounds | ||
| - Equation (3): Storage balance (charge state evolution) | ||
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| Variable Mapping: | ||
| - ``capacity_in_flow_hours`` → C (storage capacity) | ||
| - ``charge_state`` → c(t_i) (state of charge at time t_i) | ||
| - ``relative_loss_per_hour`` → ċ_rel,loss (self-discharge rate) | ||
| - ``eta_charge`` → η_in (charging efficiency) | ||
| - ``eta_discharge`` → η_out (discharging efficiency) | ||
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Contributor
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Broken Storage doc link in docstring.
The new documentation lives under docs/user-guide/mathematical-notation/elements/Storage.md, but the docstring still points to the old docs/user-guide/Mathematical Notation/Storage.md path, so the hyperlink will 404 in rendered docs. Please update the reference to the new location.
- `Storage.md <docs/user-guide/Mathematical Notation/Storage.md>`_
+ `Storage.md <docs/user-guide/mathematical-notation/elements/Storage.md>`_📝 Committable suggestion
‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
Suggested change
| Mathematical Formulation: | |
| See the complete mathematical model in the documentation: | |
| `Storage.md <docs/user-guide/Mathematical Notation/Storage.md>`_ | |
| - Equation (1): Charge state bounds | |
| - Equation (3): Storage balance (charge state evolution) | |
| Variable Mapping: | |
| - ``capacity_in_flow_hours`` → C (storage capacity) | |
| - ``charge_state`` → c(t_i) (state of charge at time t_i) | |
| - ``relative_loss_per_hour`` → ċ_rel,loss (self-discharge rate) | |
| - ``eta_charge`` → η_in (charging efficiency) | |
| - ``eta_discharge`` → η_out (discharging efficiency) | |
| Mathematical Formulation: | |
| See the complete mathematical model in the documentation: | |
| `Storage.md <docs/user-guide/mathematical-notation/elements/Storage.md>`_ | |
| - Equation (1): Charge state bounds | |
| - Equation (3): Storage balance (charge state evolution) | |
| Variable Mapping: | |
| - ``capacity_in_flow_hours`` → C (storage capacity) | |
| - ``charge_state`` → c(t_i) (state of charge at time t_i) | |
| - ``relative_loss_per_hour`` → ċ_rel,loss (self-discharge rate) | |
| - ``eta_charge`` → η_in (charging efficiency) | |
| - ``eta_discharge`` → η_out (discharging efficiency) |
🤖 Prompt for AI Agents
In flixopt/components.py around lines 250 to 263, the docstring link points to
the old path `docs/user-guide/Mathematical Notation/Storage.md` which 404s;
update the ReST hyperlink target to the new location
`docs/user-guide/mathematical-notation/elements/Storage.md` (preserve the
displayed text and formatting), and run a quick local doc build or link check to
verify the new path resolves correctly.
2 tasks
# Conflicts: # CHANGELOG.md
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* V3.0.0/main (#284) * Bugfix plot_node_balance_pie() * Scenarios/fixes (#252) * BUGFIX missing conversion to TimeSeries * BUGFIX missing conversion to TimeSeries * Bugfix node_balance with flow_hours: Negate correctly * Scenarios/filter (#253) * Add containts and startswith to filter_solution * Scenarios/drop suffix (#251) Drop suffixes in plots and add the option to drop suffixes to sanitize_dataset() * Scenarios/bar plot (#254) * Add stacked bar style to plotting methods * Rename mode to style (line, bar, area, ...) * Bugfix plotting * Fix example_calculation_types.py * Scenarios/fixes (#255) * Fix indexing issue with only one scenario * Bugfix Cooling Tower * Add option for balanced Storage Flows (equalize size of charging and discharging) * Add option for balanced Storage Flows * Change error to warning (non-fixed size with piecewise conversion AND fixed_flow_rate with OnOff) * Bugfix in DataConverter * BUGFIX: Typo (total_max/total_min in Effect) * Bugfix in node_balance() (negating did not work when using flow_hours mode * Scenarios/effects (#256) * Add methods to track effect shares of components and Flows * Add option to include flows when retrieving effects * Add properties and methods to store effect results in a dataset * Reorder methods * Rename and improve docs * Bugfix test class name * Fix the Network algorithm to calculate the sum of parallel paths, and be independent on nr of nodes and complexity of the network * Add tests for the newtork chaining and the results of effect shares * Add methods to check for circular references * Add test to check for circular references * Update cycle checker to return the found cycles * Add checks in results to confirm effects are computed correctly * BUGFIX: Remove +1 from prior testing * Add option for grouped bars to plotting.with_plotly() and make lines of stacked bar plots invisible * Reconstruct FlowSystem in CalculationResults on demand. DEPRECATION in CalculationResults * ruff check * Bugfix: save flow_system data, not the flow_system * Update tests * Scenarios/datasets results (#257) * Use dataarray instead of dataset * Change effects dataset to dataarray and use nan when no share was found * Add method for flow_rates dataset * Add methods to get flow_rates and flow_hours as datasets * Rename the dataarrays to the flow * Preserve index order * Improve filter_edges_dataset() * Simplify _create_flow_rates_dataarray() * Add dataset for sizes of Flows * Extend results structure to contain flows AND start/end infos * Add FlowResults Object * BUGFIX:Typo in _ElementResults.constraints * Add flows to results of Nodes * Simplify dataarray creation and improve FlowResults * Add nice docstrings * Improve filtering of flow results * Improve filtering of flow results. Add attribute of component * Add big dataarray with all variables but indexed * Revert "Add big dataarray with all variables but indexed" This reverts commit 08cd8a1. * Improve filtering method for coords filter and add error handling for restoring the flow system * Remove unnecessary methods in results .from_json() * Ensure consistent coord ordering in Effects dataarray * Rename get_effects_per_component() * Make effects_per_component() a dataset instead of a dataarray * Improve backwards compatability * ruff check * ruff check * Scenarios/deprecation (#258) * Deprecate .active_timesteps * Improve logger warning * Starting release notes * Bugfix in plausibility_check: Index 0 * Set bargap to 0 in stacked bars * Ensure the size is always properly indexed in results. * ruff check * BUGFIX in extract data, that causes coords in linopy to be incorrect (scalar xarray.DataArrays) * Improve yaml formatting for model documentation (#259) * Make the size/capacity a TimeSeries (#260) * Scenarios/plot network (#262) * Catch bug in plot_network with 2D arrays * Add plot_network() to test_io.py * Update deploy-docs.yaml: Run on Release publishing instead of creation and only run for stable releases (vx.y.z) * Bugfix DataConverter and add tests (#263) * Fix doc deployment to not publish on non stable releases * Remove unused code * Remove legend placing for better auto placing in plotly * Fix plotly dependency * Improve validation when adding new effects * Moved release notes to CHANGELOG.md * Try to add to_dataset to Elements * Remove TimeSeries * Remove TimeSeries * Rename conversion method to pattern: to_... * Move methods to FlowSystem * Drop nan values across time dimension if present * Allow lists of values to create DataArray * Update resolving of FlowSystem * Simplify TimeSeriesData * Move TImeSeriesData to Structure and simplyfy to inherrit from xarray.DataArray * Adjust IO * Move TimeSeriesData back to core.py and fix Conversion * Adjust IO to account for attrs of DataArrays in a Dataset * Rename transforming and connection methods in FlowSystem * Compacted IO methods * Remove infos() * remove from_dict() and to_dict() * Update __str__ of Interface * Improve str and repr * Improve str and repr * Add docstring * Unify IO stuff in Interface class * Improve test tu utilize __eq__ method * Make Interface class more robust and improve exceptions * Add option to copy Interfaces (And the FlowSystem) * Make a copy of a FLowSytsem that gets reused in a second Calculation * Remove test_timeseries.py * Reorganizing Datatypes * Remove TImeSeries and TimeSeriesCollection entirely * Remove old method * Add option to get structure with stats of dataarrays * Change __str__ method * Remove old methods * remove old imports * Add isel, sel and resample methods to FlowSystem * Remove need for timeseries with extra timestep * Simplify IO of FLowSystem * Remove parameter timesteps from IO * Improve Exceptions and Docstrings * Improve isel sel and resample methods * Change test * Bugfix * Improve * Improve * Add test for Storage Bounds * Add test for Storage Bounds * CHANGELOG.md * ruff check * Improve types * CHANGELOG.md * Bugfix in Storage * Revert changes in example_calculation_types.py * Revert changes in simple_example.py * Add convenient access to Elements in FlowSystem * Get Aggregated Calculation Working * Segmented running with wrong results * Use new persistent FLowSystem to create Calculations upfront * Improve SegmentedCalcualtion * Improve SegmentedCalcualtion * Fix SegmentedResults IO * ruff check * Update example * Updated logger essages to use .label_full instead of .label * Re-add parameters. Use deprecation warning instead * Update changelog * Improve warning message * Merge * Merge * Fit scenario weights to model coords when transforming * Merge * Removing logic between minimum, maximum and fixed size from InvestParameters * Remove selected_timesteps * Improve TypeHints * New property on InvestParameters for min/max/fixed size * Move logic for InvestParameters in Transmission to from Model to Interface * Make transformation of data more hierarchical (Flows after Components) * Add scenario validation * Change Transmission to have a "balanced" attribute. Change Tests accordingly * Improve index validations * rename method in tests * Update DataConverter * Add DataFrame Support back * Add copy() to DataConverter * Update fit_to_model_coords to take a list of coords * Make the DataConverter more universal by accepting a list of coords/dims * Update DataConverter for n-d arrays * Update DataConverter for n-d arrays * Add extra tests for 3-dims * Add FLowSystemDimension Type * Revert some logic about the fit_to_model coords * Adjust FLowSystem IO for scenarios * BUGFIX: Raise Exception instead of logging * Change usage of TimeSeriesData * Adjust logic to handle non scalars * Adjust logic to _resolve_dataarray_reference into separate method * Update IO of FlowSystem * Improve get_coords() * Adjust FlowSystem init for correct IO * Add scenario to sel and isel methods, and dont normalize scenario weights * Improve scenario_weights_handling * Add warning for not scaled weights * Update test_scenarios.py * Improve util method * Add objective to solution dataset. * Update handling of scenario_weights update tests * Ruff check. Fix type hints * Fix type hints and improve None handling * Fix coords in AggregatedCalculation * Improve Error Messages of DataConversion * Allow multi dim data conversion and broadcasting by length * Improve DataConverter to handle multi-dim arrays * Rename methods and remove unused code * Improve DataConverter by better splitting handling per datatype. Series only matches index (for one dim). Numpy matches shape * Add test for error handling * Update scenario example * Fix Handling of TimeSeriesData * Improve DataConverter * Fix resampling of the FlowSystem * Improve Warning Message * Add example that leverages resampling * Add example that leverages resampling adn fixing of Investments * Add flag to Calculation if its modeled * Make flag for connected_and_transformed FLowSystem public * Make Calcualtion Methods return themselfes to make them chainable * Improve example * Improve Unreleased CHANGELOG.md * Add year coord to FlowSystem * Improve dimension handling * Change plotting to use an indexer instead * Change plotting to use an indexer instead * Use tuples to set dimensions in Models * Bugfix in validation logic and test * Improve Errors * Improve weights handling and rescaling if None * Fix typehint * Update Broadcasting in Storage Bounds and improve type hints * Make .get_model_coords() return an actual xr.Coordinates Object * Improve get_coords() * Rename SystemModel to FlowSystemModel * First steps * Improve Feature Patterns * Improve acess to variables via short names * Improve * Add naming options to big_m_binary_bounds() * Fix and improve FLowModeling with Investment * Improve * Tyring to improve the Methods for bounding variables in different scenarios * Improve BoundingPatterns * Improve BoundingPatterns * Improve BoundingPatterns * Fix duration Modeling * Fix On + Size * Fix InvestmentModel * Fix Models * Update constraint names in test * Fix OnOffModel for multiple Flows * Update constraint names in tests * Simplify * Improve handling of vars/cons and models * Revising the basic structure of a class Model * Revising the basic structure of a class Model * Simplify and focus more on own Model class * Update tests * Improve state computation in ModelingUtilities * Improve handling of previous flowrates * Imropove repr and submodel acess * Update access pattern in tests * Fix PiecewiseEffects and StorageModel * Fix StorageModel and Remove PreventSimultaniousUseModel * Fix Aggregation and SegmentedCalculation * Update tests * Loosen precision in tests * Update test_on_hours_computation.py and some types * Rename class Model to Submodel * rename sub_model to submodel everywhere * rename self.model to self.submodel everywhere * Rename .model with .submodel if its only a submodel * Rename .sub_models with .submodels * Improve repr * Improve repr * Include def do_modeling() into __init__() of models * Make properties private * Improve Inheritance of Models * V3.0.0/plotting (#285) * Use indexer to reliably plot solutions with and wihtout scenarios/years * ruff check * Improve typehints * Update CHANGELOG.md * Bugfix from renaming to .submodel * Bugfix from renaming to .submodel * Improve indexer in results plotting * rename register_submodel() to .add_submodels() adn add SUbmodels collection class * Add nice repr to FlowSystemModel and Submodel * Bugfix .variables and .constraints * Add type checks to modeling.py * Improve assertion in tests * Improve docstrings and register ElementModels directly in FlowSystemModel * Improve __repr__() * ruff check * Use new method to compare sets in tests * ruff check * Update Contribute.md, some dependencies and add pre-commit * Pre commit hook * Run Pre-Commit Hook for the first time * Fix link in README.md * Update Effect name in tests to be 'costs' instead of 'Costs' Everywhere Simplify testing by creating a Element Library * Improve some of the modeling and coord handling * Add tests with years and scenarios * Update tests to run with multiple coords * Fix Effects dataset computation in case of empty effects * Update Test for multiple dims Fix Dim order in scaled_bounds_with_state Bugfix logic in .use_switch_on * Fix test with multiple dims * Fix test with multiple dims * New test * New test for previous flow_rates * V3.0.0/main fit to model coords improve (#295) * Change fit_to_model_coords to work with a Collection of dims * Improve fit_to_model_coords * Improve CHANGELOG.md * Update pyproject.toml * new ruff check * Merge branch 'main' into dev # Conflicts: # CHANGELOG.md # flixopt/network_app.py * Update CHANGELOG.md * Fix Error message * Revert changes * Feature/v3/update (#352) * Remove need for timeseries with extra timestep * Simplify IO of FLowSystem * Remove parameter timesteps from IO * Improve Exceptions and Docstrings * Improve isel sel and resample methods * Change test * Bugfix * Improve * Improve * Add test for Storage Bounds * Add test for Storage Bounds * CHANGELOG.md * ruff check * Improve types * CHANGELOG.md * Bugfix in Storage * Revert changes in example_calculation_types.py * Revert changes in simple_example.py * Add convenient access to Elements in FlowSystem * Get Aggregated Calculation Working * Segmented running with wrong results * Use new persistent FLowSystem to create Calculations upfront * Improve SegmentedCalcualtion * Improve SegmentedCalcualtion * Fix SegmentedResults IO * ruff check * Update example * Updated logger essages to use .label_full instead of .label * Re-add parameters. Use deprecation warning instead * Update changelog * Improve warning message * Merge * Merge * Fit scenario weights to model coords when transforming * Merge * Removing logic between minimum, maximum and fixed size from InvestParameters * Remove selected_timesteps * Improve TypeHints * New property on InvestParameters for min/max/fixed size * Move logic for InvestParameters in Transmission to from Model to Interface * Make transformation of data more hierarchical (Flows after Components) * Add scenario validation * Change Transmission to have a "balanced" attribute. Change Tests accordingly * Improve index validations * rename method in tests * Update DataConverter * Add DataFrame Support back * Add copy() to DataConverter * Update fit_to_model_coords to take a list of coords * Make the DataConverter more universal by accepting a list of coords/dims * Update DataConverter for n-d arrays * Update DataConverter for n-d arrays * Add extra tests for 3-dims * Add FLowSystemDimension Type * Revert some logic about the fit_to_model coords * Adjust FLowSystem IO for scenarios * BUGFIX: Raise Exception instead of logging * Change usage of TimeSeriesData * Adjust logic to handle non scalars * Adjust logic to _resolve_dataarray_reference into separate method * Update IO of FlowSystem * Improve get_coords() * Adjust FlowSystem init for correct IO * Add scenario to sel and isel methods, and dont normalize scenario weights * Improve scenario_weights_handling * Add warning for not scaled weights * Update test_scenarios.py * Improve util method * Add objective to solution dataset. * Update handling of scenario_weights update tests * Ruff check. Fix type hints * Fix type hints and improve None handling * Fix coords in AggregatedCalculation * Improve Error Messages of DataConversion * Allow multi dim data conversion and broadcasting by length * Improve DataConverter to handle multi-dim arrays * Rename methods and remove unused code * Improve DataConverter by better splitting handling per datatype. Series only matches index (for one dim). Numpy matches shape * Add test for error handling * Update scenario example * Fix Handling of TimeSeriesData * Improve DataConverter * Fix resampling of the FlowSystem * Improve Warning Message * Add example that leverages resampling * Add example that leverages resampling adn fixing of Investments * Add flag to Calculation if its modeled * Make flag for connected_and_transformed FLowSystem public * Make Calcualtion Methods return themselfes to make them chainable * Improve example * Improve Unreleased CHANGELOG.md * Add year coord to FlowSystem * Improve dimension handling * Change plotting to use an indexer instead * Change plotting to use an indexer instead * Use tuples to set dimensions in Models * Bugfix in validation logic and test * Improve Errors * Improve weights handling and rescaling if None * Fix typehint * Update Broadcasting in Storage Bounds and improve type hints * Make .get_model_coords() return an actual xr.Coordinates Object * Improve get_coords() * Rename SystemModel to FlowSystemModel * First steps * Improve Feature Patterns * Improve acess to variables via short names * Improve * Add naming options to big_m_binary_bounds() * Fix and improve FLowModeling with Investment * Improve * Tyring to improve the Methods for bounding variables in different scenarios * Improve BoundingPatterns * Improve BoundingPatterns * Improve BoundingPatterns * Fix duration Modeling * Fix On + Size * Fix InvestmentModel * Fix Models * Update constraint names in test * Fix OnOffModel for multiple Flows * Update constraint names in tests * Simplify * Improve handling of vars/cons and models * Revising the basic structure of a class Model * Revising the basic structure of a class Model * Simplify and focus more on own Model class * Update tests * Improve state computation in ModelingUtilities * Improve handling of previous flowrates * Imropove repr and submodel acess * Update access pattern in tests * Fix PiecewiseEffects and StorageModel * Fix StorageModel and Remove PreventSimultaniousUseModel * Fix Aggregation and SegmentedCalculation * Update tests * Loosen precision in tests * Update test_on_hours_computation.py and some types * Rename class Model to Submodel * rename sub_model to submodel everywhere * rename self.model to self.submodel everywhere * Rename .model with .submodel if its only a submodel * Rename .sub_models with .submodels * Improve repr * Improve repr * Include def do_modeling() into __init__() of models * Make properties private * Improve Inheritance of Models * V3.0.0/plotting (#285) * Use indexer to reliably plot solutions with and wihtout scenarios/years * ruff check * Improve typehints * Update CHANGELOG.md * Bugfix from renaming to .submodel * Bugfix from renaming to .submodel * Improve indexer in results plotting * rename register_submodel() to .add_submodels() adn add SUbmodels collection class * Add nice repr to FlowSystemModel and Submodel * Bugfix .variables and .constraints * Add type checks to modeling.py * Improve assertion in tests * Improve docstrings and register ElementModels directly in FlowSystemModel * Improve __repr__() * ruff check * Use new method to compare sets in tests * ruff check * Update Contribute.md, some dependencies and add pre-commit * Pre commit hook * Run Pre-Commit Hook for the first time * Fix link in README.md * Update Effect name in tests to be 'costs' instead of 'Costs' Everywhere Simplify testing by creating a Element Library * Improve some of the modeling and coord handling * Add tests with years and scenarios * Update tests to run with multiple coords * Fix Effects dataset computation in case of empty effects * Update Test for multiple dims Fix Dim order in scaled_bounds_with_state Bugfix logic in .use_switch_on * Fix test with multiple dims * Fix test with multiple dims * New test * New test for previous flow_rates * Add Model for YearAwareInvestments * Add FlowSystem.years_per_year attribute and "years_of_last_year" parameter to FlowSystem() * Add YearAwareInvestmentModel * Add new Interface * Improve YearAwareInvestmentModel * Rename and improve * Move piecewise_effects * COmbine TImingInvestment into a single interface * Add model tests for investment * Add size_changes variables * Add size_changes variables * Improve InvestmentModel * Improve InvestmentModel * Rename parameters * remove old code * Add a duration_in_years to the InvestTimingParameters * Improve handling of fixed_duration * Improve validation and make Investment/divestment optional by default * Rename some vars and improve previous handling * Add validation for previous size * Change fit_to_model_coords to work with a Collection of dims * Improve fit_to_model_coords * Improve test * Update transform_data() * Add new "year of investment" coord to FlowSystem * Add 'year_of_investment' dimension to FlowSystem * Improve InvestmentTiming * Improve InvestmentTiming * Add specific_effect back * add effects_by_investment_year back * Add year_of_investment to FLowSystem.sel() * Improve Interface * Handle selection of years properly again * Temp * Make ModelingPrimitives.consecutive_duration_tracking() dim-agnostic * Use new lifetime variable and constraining methods * Improve Plausibility check * Improve InvestmentTImingParameters * Improve weights * Adjust test * Remove old classes * V3.0.0/main fit to model coords improve (#295) * Change fit_to_model_coords to work with a Collection of dims * Improve fit_to_model_coords * ruff format * Revert changes * Update type hints * Revert changes introduced by new Multiperiod Invest parameters * Improve CHnagelog and docstring of Storage * Improve Changelog * Improve InvestmentModel * Improve InvestmentModel to have 2 cases. One without years and one with * Improve InvestmentModel to have 2 cases. One without years and one with years. Further, remove investment_scenarios parameter * Revert some changes regarding Investments * Typo * Remove Investment test file (only local testing) * More reverted changes * More reverted changes * Add years_of_last_year to docstring * Revert change from Investment * Revert change from Investment * Remove old todos.txt file * Fix typos in CHANGELOG.md * Improve usage of name_prefix to intelligently join with the label * Ensure IO of years_of_last_year * Typo * Typo * activat tests on pulls to feature/v3 * activat tests on pulls to feature/v3/main * Feature/v3/low-impact-improvements (#355) * Fix typo * Prefer robust scalar extraction for timestep sizes in aggregation * Improve docs and error messages * Update examples * Use validated timesteps * Remove unnessesary import * Use FlowSystem.model instead of FlowSystem.submodel * Fix Error message * Improve CHANGELOG.md * Use self.standard_effect instead of provate self._standard_effect and update docstring * in calculate_all_conversion_paths, use `collections.deque` for efficiency on large graphs * Make aggregation_parameters.hours_per_period more robust by using rounding * Improve import and typos * Improve docstring * Use validated timesteps * Improve error * Improve warning * Improve type hint * Improve CHANGELOG.md: typos, wording and duplicate entries * Improve CI (#357) Separate example testing from other tests by marking them. By default, purest doesn't run the example tests * Feature/v3/data converter (#356) * Update DataConverter * Update tests of error messages * Update tests of error messages * Update Dataconverter to allow bool values * fix tests * Improve code order of prefix in transform_data() * Move pytest-xdist to dev deps * Fix transform_data to not pass a prefix to flow * Move to unreleased Add emojis to CHANGELOG.md * Feature/v3/feature/308 rename effect domains (#365) * Rename effect domains * Rename effect domains * Ensure backwards compatability * Improve * Improve * Bugfix IO with deprectaed params * Add guards for extra kwargs * Add guards for extra kwargs * centralize logic for deprectaed params * Move handlign from centralized back to classes in a dedicated method * Improce property handling * Move handling to Interface class * Getting lost * Revert "Getting lost" This reverts commit 3c0db76. * Revert "Move handling to Interface class" This reverts commit 09bdeec. * Revert "Improce property handling" This reverts commit 5fe2c64. * Revert "Move handlign from centralized back to classes in a dedicated method" This reverts commit 9f4c1f6. * Revert "centralize logic for deprectaed params" This reverts commit 4a82574. * Add "" to warnings * Revert change in examples * Improve BackwardsCompatibleDataset * Add unit tests for backwards compatability * Remove backwards compatible dataset * Renamed maximum_temporal_per_hour to maximum_per_hour and minimum_temporal_per_hour to minimum_per_hour * Add entires to CHANGELOG.md * Remove backwards compatible dataset * Remove unused imports * Move to unreleased * Catch up on missed renamings from merge * Catch up on missed renamings from merge * Typo * Typo * Several small improvements or potential future bug preventions * Feature/v3/feature/305 rename specific share to other effects to specific share from effect (#366) * Step 1 * Bugfix * Make fit_effects_to_model_coords() more flexible * Fix dims * Update conftest.py * Typos * Improve Effect examples * Add extra validation for Effect Shares * Feature/v3/feature/367 rename year dimension to period (#370) * The framework now uses "period" instead of "year" as the dimension name and "periodic" instead of "nontemporal" for the effect domain * Update CHANGELOG.md * Remove periods_of_last_period parameter and adjust weights calculation * Bugfix * Bugfix * Switch from "as_time_series": bool to "dims": [time, period, scenario] arguments * Improve normalization of weights * Update tests * Typos in docs * Improve docstrings * Improve docstrings * Update CHANGELOG.md * Improved tests: added extra time+scenarios combination * Add rename and improve CHANGELOG.md * Made CHANGELOG.md more concise * Simplify array summation and improve `np.isclose` usage in `modeling` and `aggregation` modules. * Make storage and load profile methods flexible by introducing `timesteps_length` parameter; update test configurations accordingly. * Refine error messages in `ModelingPrimitives` to correctly reference updated method names. * Enhance test fixtures by adding `ids` for parameterized tests, improve input flexibility with dynamic timestep length, and refine error message sorting logic. * Refactor variable selection and constraint logic in `aggregation.py` for handling more than only a time dimension * Adjust constraint in `aggregation.py` to enforce stricter summation limit (1 instead of 1.1) * Reverse transition constraint inequality for consistency in `modeling.py`. * Update dependency to use h5netcdf instead of netcdf4 * Feature/v3/several improvements (#372) * Update deprecated properties to use new aggregation attributes in `core.py`. * Refactor `drop_constant_arrays` in `core.py` to improve clarity, add type hints, and enhance logging for dropped variables. * Bugfix example_calculation_types.py and two_stage_optimization.py * Use time selection more explicitly * Refactor plausibility checks in `components.py` to handle string-based `initial_charge_state` more robustly and simplify capacity bounds retrieval using `InvestParameters`. * Refactor `create_transmission_equation` in `components.py` to handle `relative_losses` gracefully when unset and simplify the constraint definition. * Update pytest `addopts` formatting in `pyproject.toml` to work with both unix and windows * Refine null value handling when resolving dataarrays` to check for 'time' dimension before dropping all-null values. * Refactor flow system restoration to improve exception handling and ensure logger state resets. * Refactor imports in `elements.py` to remove unused `ModelingPrimitives` from `features` and include it from `modeling` instead. * Refactor `count_consecutive_states` in `modeling.py` to enhance documentation, improve edge case handling, and simplify array processing. * Refactor `drop_constant_arrays` to handle NaN cases with `skipna` and sort dropped variables for better logging; streamline logger state restoration in `results.py`. * Temp * Improve NAN handling in count_consecutive_states() * Refactor plausibility checks in `components.py` to prevent initial capacity from constraining investment decisions and improve error messaging. * Feature/v3/feature/no warnings in tests (#373) * Refactor examples to not use deprectaed patterns * Refactor tests to replace deprecated `sink`/`source` properties with `inputs`/`outputs` in component definitions. * Use 'h' instead of deprectaed 'H' in coordinate freq in tests; adjust `xr.concat` in `results.py` to use `join='outer'` for safer merging. * Refactor plot tests to use non-interactive backends, save plots as files, and close figures to prevent memory leaks. * Refactor plot tests to use non-interactive Plotly renderer (`json`), add cleanup with `tearDown`, and ensure compatibility with non-interactive Matplotlib backends. * Configure pytest filters to treat most warnings as errors, ignore specific third-party warnings, and display all warnings from internal code. * Revert "Configure pytest filters to treat most warnings as errors, ignore specific third-party warnings, and display all warnings from internal code." This reverts commit 0928b26. * Refactor plotting logic to prevent memory leaks, improve backend handling, and add test fixtures for cleanup and non-interactive configurations. * Update pytest filterwarnings to treat most warnings as errors, ignore specific third-party warnings, and display all internal warnings. * Suppress specific third-party warnings in `__init__.py` to reduce noise for end users. * Update pytest warning filters: treat internal warnings as errors, revert treating most third-party warnings as errors. * Suppress additional third-party warnings in `__init__.py` to minimize runtime noise. * Update pytest warning filters: suppress specific third-party warnings and add detailed context for `__init__.py` filters. * Sync and consolidate third-party warning filters in `__init__.py` and `pyproject.toml` to suppress runtime noise effectively. * Expand and clarify third-party warning filters in `__init__.py` and `pyproject.toml` for improved runtime consistency and reduced noise. * Update deprecated code in tests * Refactor backend checks in `plotting.py` and streamline test fixtures for consistency in handling non-interactive backends. * Refactor plotting logic to handle test environments explicitly, remove unused Plotly configuration, and improve figure cleanup in tests. * Add entry to CHANGELOG.md * Typos in example * Reogranize Docs (#377) * Improve effects parameter naming in InvestParameters (#389) * FIrst Try * Improve deprecation * Update usage of deprectated parameters * Improve None handling * Add extra kwargs handling * Improve deprecation * Use custom method for kwargs * Add deprecation method * Apply deprecation method to other classes * Apply to effects.py as well * Update usage of deprectaed parameters * Update CHANGELOG.md * Update Docs * Feature/v3/feature/test examples dependent (#390) * Update example test to run dependent examples in order * Update example test to run dependent examples in order * Update CHANGELOG.md * Improve test directory handling * Improve test directory handling * Typo * Feature/v3/feature/rename investparameter optional to mandatory (#392) * Change .optional to .mandatory * Change .optional to .mandatory * Remove not needed properties * Improve deprectation warnings * Improve deprectation of "optional" * Remove all usages of old "optional" parameter in code * Typo * Imrpove readability * Adjust some logging levels * Add scenarios and periods to repr and str of FlowSystem * Feature/v3/feature/386 use better default logging colors and dont log to file by default (#394) * Fix `charge_state` Constraint in `Storage` leading to incorrect losses in discharge and therefore incorrect charge states and discharge values (#347) * Fix equation in Storage * Fix test for equation in Storage * Update CHANGELOG.md * Improve Changelog Message * Fix CHANGELOG.md * Simplify changes from next release * Update CHANGELOG.md * Fix CHANGELOG.md * chore(deps): update dependency mkdocs-material to v9.6.20 (#369) Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> * Improve renovate.json to automerge ruff despite 0.x version * chore(deps): update dependency tsam to v2.3.9 (#379) Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> * chore(deps): update dependency ruff to v0.13.2 (#378) Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> * Feature/Improve Configuration options and handling (#385) * Refactor configuration management: remove dataclass-based schema and simplify CONFIG structure. * Refactor configuration loading: switch from `os` to `pathlib`, streamline YAML loading logic. * Refactor logging setup: split handler creation into dedicated functions, simplify configuration logic. * Improve logging configurability and safety - Add support for `RotatingFileHandler` to prevent large log files. - Introduce `console` flag for optional console logging. - Default to `NullHandler` when no handlers are configured for better library behavior. * Temp * Temp * Temp * Temp * Temp * Temp * Refactor configuration and logging: remove unused `merge_configs` function, streamline logging setup, and encapsulate `_setup_logging` as an internal function. * Remove unused `change_logging_level` import and export. * Add tests for config.py * Expand `config.py` test coverage: add tests for custom config loading, logging setup, dict roundtrip, and attribute modification. * Expand `test_config.py` coverage: add modeling config persistence test, refine logging reset, and improve partial config load assertions. * Expand `test_config.py` coverage: add teardown for state cleanup and reset modeling config in setup. * Add `CONFIG.reset()` method and expand test coverage to verify default restoration * Refactor `CONFIG` to centralize defaults in `_DEFAULTS` and ensure `reset()` aligns with them; add test to verify consistency. * Refactor `_DEFAULTS` to use `MappingProxyType` for immutability, restructure config hierarchy, and simplify `reset()` implementation for maintainability; update tests accordingly. * Mark `TestConfigModule` tests to run in a single worker with `@pytest.mark.xdist_group` to prevent global config interference. * Add default log file * Update CHANGELOG.md * Readd change_logging_level() for backwards compatability * Add more options to config.py * Add a docstring to config.y * Add a docstring to config.y * rename parameter message_format * Improve color config * Improve color config * Update CHANGELOG.md * Improve color handling * Improve color handling * Remove console Logging explicityl from examples * Make log to console the default * Make log to console the default * Add individual level parameters for console and file * Add extra Handler section * Use dedicated levels for both handlers * Switch back to not use Handlers * Revert "Switch back to not use Handlers" This reverts commit 05bbccb. * Revert "Use dedicated levels for both handlers" This reverts commit ed0542b. * Revert "Add extra Handler section" This reverts commit a133cc8. * Revert "Add individual level parameters for console and file" This reverts commit 19f81c9. * Fix CHANGELOG.md * Update CHANGELOG.md * Fix CHANGELOG.md * Allow blank issues * Change default logging behaviour to other colors and no file logging * Use white for INFO * Use terminal default for INFO * Explicitly use stdout for StreamHandler * Use terminal default for Logging color * Add option for loggger name * Update CHANGELOG.md * Ensure custom formats are being applied * Catch empty config files * Update test to match new defaults --------- Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> * Fix warnings filter * Remove config file (#391) * Remove config file * Remove yaml in MANIFEST.in * Improve config console logger: Allow stderr and improve multiline format (#395) * Add some validation to config.py * Improve file Permission handling in config.py * Remove unwanted return * Improve Docstrings in config.py * Improve Docstrings in config.py * Typo * Use code block in docstring * Allow stderr for console logging * Make docstrings more compact * Make docstrings more compact * Updated to actually use stderr * Simplify format() * Improve format * Add extra validation * Update CHANGELOG.md * Feature/v3/feature/381 feature equalize sizes and or flow rates between scenarios (#396) * First try * Centralize in FlowSystem * Add centralized handling * Logical Bug * Add to IO * Add test * Add some error handling and logging * Rename variable * Change parameter naming * Remove not needed method * Refactor to reduce duplication * Change defaults * Change defaults * Change defaults * Update docs * Update docs * Update docs * Update docs * Feature/v3/feature/Linked investments over multiple periods * Reorganize InvestmentParameters to always create the binary investment variable * Add new variable that indicates wether investment was taken, independent of period and allow linked periods * Improve Handling of linked periods * Improve Handling of linked periods * Add examples * Typos * Fix: reference invested only after it exists * Improve readbility of equation * Update from Merge * Improve InvestmentModel * Improve readability * Improve readability and reorder methods * Improve logging * Improve InvestmentModel * Rename to "invested" * Update CHANGELOG.md * Bugfix * Improve docstring * Improve InvestmentModel to be more inline with the previous Version * Improve Exceptions and add a meaningfull comment in InvestParameters * Typo * Feature/v3/feature/common resources in examples (#401) * Typo * Typos in scenario_example.py * Improve data files in examples * Improve data files in examples * Handle local install more gracefully with __version__ * Remove bad example * Increase timeout in examples * Improve test_examples.py * Improve example * Fixx Error message in test * Fix: Dependecy issue with python 3.10 * run ci on more branches if there are prs * Minor improvements and Update to the CHANGELOG.md * Feature/v3/feature/last minute improvements (#403) * Typos oin CHANGELOG.md * Add error handling in exmaple * Surface warnings during tests (avoid hiding deprecations) * Add missing docs file * Imrpve Releasnotes of v2.2.0 * Improve docs * Remove some filterwarnings from tsam --------- Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com>
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Description
Brief description of the changes in this PR.
Type of Change
Related Issues
Closes #384
Testing
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Summary by CodeRabbit