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@cbib

Centre de Bioinformatique de Bordeaux

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  1. Seurat-Integrate Seurat-Integrate Public

    R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an integration benchmarking toolkit.

    R 34 3

  2. TrialMatchAI TrialMatchAI Public

    TrialMatchAI aims to leverage large language models (LLMs) to streamline patient matching with clinical trials based on unique patient characteristics and eligibility criteria

    Python 25 10

  3. DeepSpot DeepSpot Public

    DeepSpot is a deep learning method for the enhancement of mRNA fluorescent spots in microscopy images

    Python 15 3

  4. MIX MIX Public

    MIX: Combining multiple assemblies from NGS data

    Python 13 6

  5. virhunter virhunter Public

    Deep Learning method for novel virus detection in sequencing data

    Python 10 2

  6. MICADo MICADo Public

    Looking for mutations in PacBio cancer data: an alignment-free method

    Python 8 2

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