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Chipchip JBrowse tracks#152

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bgajria wants to merge 8 commits intomasterfrom
chipchip
Open

Chipchip JBrowse tracks#152
bgajria wants to merge 8 commits intomasterfrom
chipchip

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@bgajria
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@bgajria bgajria commented Feb 19, 2026

Branch is for adding the Peaks and Smoothed chipchip tracks. Need help!!

Current state i:

  1. for ChipChipSmoothedTrack - XYPlot
    Get error in console: "Not a BigWig or BigBed file Not a BigWig or BigBed file"

Browser webtool says: "SyntaxError: JSON.parse: unexpected character at line 1 column 1 of the JSON data
Cannot open file /var/www/ToxoDB/toxo.bindu/webapp/WEB-INF/wdk-model//lib/jbrowse/auto_generated/data.bigwig/datasetAndPresenterProps.conf for reading: No such file or directory at /var/www/ToxoDB/toxo.bindu/webapp/WEB-INF/wdk-model//lib/perl/ApiCommonModel/Model/JBrowseUtil.pm line 208.

  1. for ChipChipPeakTrack - Segments
    Get error in console: "Uncaught TypeError: Parameter 'url' must be a string, not undefined"

@bgajria bgajria requested a review from jbrestel February 19, 2026 14:09
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bgajria commented Feb 19, 2026

Dont know why the conflict shows up... i have been able to rebuild successfully.

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