CompatHelper: bump compat for MixedModels to 5, (keep existing compat)

Project.toml

@@ -1,7 +1,7 @@
 name = "MixedModelsSim"
 uuid = "d5ae56c5-23ca-4a1f-b505-9fc4796fc1fe"
 authors = ["Phillip Alday", "Douglas Bates", "Lisa DeBruine", "Reinhold Kliegl"]
-version = "0.2.11"
+version = "0.2.12"
 
 [deps]
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
@@ -14,9 +14,9 @@ Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c"
 
 [compat]
 LinearAlgebra = "1"
-MixedModels = "4"
+MixedModels = "4.22, 5"
 PooledArrays = "0.5, 1"
 PrettyTables = "0.11, 0.12, 1, 2"
 Statistics = "1"
 Tables = "1.0"
-julia = "1.6"
+julia = "1.10"

docs/src/simulation_tutorial.md

@@ -117,11 +117,9 @@ rng = StableRNG(42);
 
 Run nsims iterations:
 ```@example Main
-kb07_sim = parametricbootstrap(rng, nsims, kb07_m; use_threads = false);
+kb07_sim = parametricbootstrap(rng, nsims, kb07_m);
 ```
 
-**Try**: Run the code above with or without `use_threads = true`. Did performance get better or worse? Check out the help information `parametricbootstrap` to see why!
-
 The returned value `kb07_sim` contains the results of the bootstrapping procedure, which we can convert to a dataframe
 
 ```@example Main
@@ -221,7 +219,7 @@ new_beta[2:4] = kb07_m.β[2:4] / 2
 
 Run simulations:
 ```@example Main
-kb07_sim_half = parametricbootstrap(StableRNG(42), nsims, kb07_m; β = new_beta, use_threads = false);
+kb07_sim_half = parametricbootstrap(StableRNG(42), nsims, kb07_m; β = new_beta);
 ```
 
 ### Power calculation
@@ -485,8 +483,7 @@ Run nsims iterations:
 sim1 = parametricbootstrap(rng, nsims, m1;
                            β = new_beta,
                            σ = new_sigma,
-                           θ = new_theta,
-                           use_threads = false);
+                           θ = new_theta);
 ```
 
 ### Power calculation
@@ -644,8 +641,7 @@ Run nsims iterations:
 fake_kb07_sim = parametricbootstrap(rng, nsims, fake_kb07_m,
                         β = new_beta,
                         σ = new_sigma,
-                        θ = new_theta,
-                        use_threads = false);
+                        θ = new_theta);
 ```
 
 ### Power calculation
@@ -765,8 +761,7 @@ nothing # hide
                                    β = new_beta,
                                    σ = new_sigma,
                                    θ = new_theta,
-                                   use_threads = false,
-                                   hide_progress=true);
+                                   progress=false);
 
     # Power calculation
     local ptbl = power_table(fake_sim)

test/power.jl

@@ -16,7 +16,7 @@ dat = simdat_crossed(StableRNG(42), subj_n, item_n;
 form = @formula(dv ~ 1 + age + pet + cond + time + (1 | subj) + (1 | item));
 cont = Dict(nm => HelmertCoding() for nm in (:age, :pet, :cond, :time));
 fm1 = fit(MixedModel, form, dat; contrasts=cont, REML=false, progress=false);
-sim = parametricbootstrap(StableRNG(42), 10, fm1; use_threads=false, hide_progress=true);
+sim = parametricbootstrap(StableRNG(42), 10, fm1; progress=false);
 
 @testset "power_table" begin
     pt = power_table(sim)