Include BLINK comparison #3
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BLINK: Simplify plotting Include numpy version notice in colab tutorial Update README
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BLINK is a high-performance MS/MS spectra comparison tool. It relies on representing cosine similarity as sparse matmul to accelerate it.
This notebook adds a notebook to compare SimMS with BLINK, both in terms of speed and accuracy, and to create plots for the paper.
Docker files were removed, since this was just a development leftover, and not supported.
README.md and colab tutoral were touched up a bit too.