115 forestly release v014

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: forestly
 Title: Interactive Forest Plot
-Version: 0.1.3
+Version: 0.1.4
 Authors@R: c(
     person("Yilong", "Zhang", role = c("aut")),
     person("Benjamin", "Wang", email = "benjamin.wang@merck.com", role = c("aut", "cre")),
@@ -12,6 +12,7 @@ Authors@R: c(
     person("Jeetener", "Chauhan", role = "ctb"),
     person("Li", "Ma", role = "ctb"),
     person("Chen", "Wang", role = "ctb"),
+    person("Madhusudhan", "Ginnaram", role = "ctb"),
     person("Merck & Co., Inc., Rahway, NJ, USA and its affiliates", role = "cph")
     )
 Description: Interactive forest plot for clinical trial safety analysis

NEWS.md

@@ -1,45 +1,57 @@
+# forestly 0.1.4
+
+## New features
+
+-   Add `download_button` argument to `ae_forestly()` to control whether the CSV download button is shown (#109).
+-   Add `ae_label` argument to `ae_forestly()` to customize the label of the AE filter (#110).
+-   Add `display_diff_toggle` argument to `ae_forestly()` to control whether the toggle button for displaying the "diff" column is shown (#114).
+-   Add new vignettes: vignette("customize-display-only-soc") and vignette("customize-toggle-buttons") (#108, #114).
+
+## Improvements
+
+-   Add a tool tip to the risk-difference column so that the full text is displayed (#117).
+
 # forestly 0.1.3
 
 ## New features
 
-- `rtf_static_forestly()` is now available for generating static forest plots in RTF format (#60).
-- Add data source script `data-raw/forestly_adae.R` (#72).
-- Add `prop_range` and `diff_range` arguments to `format_ae_forestly()` to allow control over the x-axis limits for AE proportion and risk difference plots (#80).
-- Add `col_header` and `fig_header` arguments to `format_ae_forestly()` to enable customizable column and figure headers for risk difference outputs (#96).
-- Add `filter_range` argument to `ae_forestly()` for flexible slider range customization (#97).
+-   `rtf_static_forestly()` is now available for generating static forest plots in RTF format (#60).
+-   Add data source script `data-raw/forestly_adae.R` (#72).
+-   Add `prop_range` and `diff_range` arguments to `format_ae_forestly()` to allow control over the x-axis limits for AE proportion and risk difference plots (#80).
+-   Add `col_header` and `fig_header` arguments to `format_ae_forestly()` to enable customizable column and figure headers for risk difference outputs (#96).
+-   Add `filter_range` argument to `ae_forestly()` for flexible slider range customization (#97).
 
 ## Bug fixes
 
-- Fix bug to correctly pass the `digits` to the display format of each column in `format_ae_forestly()` to make the number of displayed decimal places for proportions and risk differences user-configurable (#90).
-- Fix bug so that the "n" and "(%)" columns in the output table are displayed only when specified in the `display` of `format_ae_forestly()` (#95)
+-   Fix bug to correctly pass the `digits` to the display format of each column in `format_ae_forestly()` to make the number of displayed decimal places for proportions and risk differences user-configurable (#90).
+-   Fix bug so that the "n" and "(%)" columns in the output table are displayed only when specified in the `display` of `format_ae_forestly()` (#95)
 
 ## Improvements
 
-- Update `format_ae_listing()` to consistently use list-style indexing (res[["column"]]) instead of dollar-sign notation (res$column) for accessing data frame columns (#71).
-- Reorganize `pkgdown` site structure (#81, #82, #85)
-- Update `format_ae_listing()` to replace direct use of `tools::toTitleCase()` with new helper function `titelcase()` for the case where SEX in the input data is factorized (#92).
-- Update `format_ae_forestly()` to ensure consistency in the order of treatment groups across tables and figures (#94).
+-   Update `format_ae_listing()` to consistently use list-style indexing (res[["column"]]) instead of dollar-sign notation (res\$column) for accessing data frame columns (#71).
+-   Reorganize `pkgdown` site structure (#81, #82, #85)
+-   Update `format_ae_listing()` to replace direct use of `tools::toTitleCase()` with new helper function `titelcase()` for the case where SEX in the input data is factorized (#92).
+-   Update `format_ae_forestly()` to ensure consistency in the order of treatment groups across tables and figures (#94).
 
 # forestly 0.1.2
 
-- Fix a bug that prevents reactable from rendering under reactR >= 0.6.0 (#67).
-- Add a new argument `filter_label` to `ae_forestly()` for controlling slider bar label (#68).
+-   Fix a bug that prevents reactable from rendering under reactR \>= 0.6.0 (#67).
+-   Add a new argument `filter_label` to `ae_forestly()` for controlling slider bar label (#68).
 
 # forestly 0.1.1
 
-- Add button to display SOC column for subset.
-- Refine the default value of `meta_forestly()`.
-- Update `format_ae_listing()` to be better aligned with oncology AEs reporting.
-- Enhance functionality related to drill-down listing.
-- Inherit paramter_term from all parameters of a metadata by default (#20).
-- Allow user to specify treatment group (#15).
-- Add warning when using tibble as input (#17).
-- Fix bug when there is no record of a selected AE category (#9).
-- Fix bug when there are multiple plots displayed on one page (#12).
-- Update dataset `forestly_adae` since a variable was a factor
-  which is unexpected.
+-   Add button to display SOC column for subset.
+-   Refine the default value of `meta_forestly()`.
+-   Update `format_ae_listing()` to be better aligned with oncology AEs reporting.
+-   Enhance functionality related to drill-down listing.
+-   Inherit paramter_term from all parameters of a metadata by default (#20).
+-   Allow user to specify treatment group (#15).
+-   Add warning when using tibble as input (#17).
+-   Fix bug when there is no record of a selected AE category (#9).
+-   Fix bug when there are multiple plots displayed on one page (#12).
+-   Update dataset `forestly_adae` since a variable was a factor which is unexpected.
 
 # forestly 0.1.0
 
-- Initial version.
-- Added a `NEWS.md` file to track changes to the package.
+-   Initial version.
+-   Added a `NEWS.md` file to track changes to the package.

R/format_ae_forestly.R

@@ -259,7 +259,13 @@ format_ae_forestly <- function(
     )
   }
   columnGroups[[m_group + 1]] <- reactable::colGroup(
-    name = diff_col_header,
+    name = paste0(
+      '<span title="',
+      htmltools::htmlEscape(gsub(" <br> ", " ", diff_col_header, fixed = TRUE)),
+      '">',
+      diff_col_header,
+      '</span>'
+    ),
     html = TRUE,
     columns = names(outdata$diff)
   )
@@ -315,7 +321,10 @@ format_ae_forestly <- function(
     function(x) {
       i <- as.numeric(gsub("diff_", "", x, fixed = TRUE))
       reactable::colDef(
-        header = outdata$group[i],
+        header = htmltools::tags$span(
+          title = outdata$group[i],
+          outdata$group[i]
+        ),
         minWidth = width_diff,
         show = display_diff,
         format = reactable::colFormat(digits = digits)

README.md

@@ -80,4 +80,4 @@ The interactive features for safety analysis include:
 ## References
 
 - Paper: [2023 PHUSE US Connect](https://phuse.s3.eu-central-1.amazonaws.com/Archive/2023/Connect/US/Florida/PAP_DV07.pdf)
-- Talk: [2021 R/Pharma Conference](https://rinpharma.com/publication/rinpharma_206/)
+- Talk: [2021 R/Pharma Conference](https://www.youtube.com/watch?v=HICBeSqD6kI)