Systematic Approach of adding notebooks

[kolibril13]

No description provided.

[kolibril13]

@zivy :
I do not understand the error at readthedocs:
After the commit "added more notebooks" everything is fine:
https://readthedocs.org/projects/simpleitk-notebooks/builds/15235578/
but after the commit "adding 11" readthedocs is failing:
https://readthedocs.org/projects/simpleitk-notebooks/builds/15235764/

Notebook error:
DeadKernelError in Python/03_Image_Details.ipynb:
Kernel died

Do you have an idea why the kernel died here?
It is strange, because this notebook was not altered from the previous commit, so it seems the kernel died randomly.
The only thing that got changed was that I added the notebook Python/11_Progress.ipynb in "adding 11"
I hope I am missing something here.

[zivy]

@kolibril13,

Not sure what the issue is. The 03_Image_Details notebook has multiple cells that have exceptions. These are either intentional or due to missing Fiji. If the conversion is run with ignore exceptions it should just work fine. Apparently it didn't but I have no clue why. Locally I have never had a problem with this notebook. I tried it via binder and it is fine there too, just many exceptions but these are all expected.

Is there a way to ssh into a RTD environment to try to debug?

[kolibril13]

Interesting, after the commit change nbsphinx_timeout value readthedocs does not fail.

[kolibril13]

Still not failing, maybe the nbsphinx_timeout parameter did the trick. Adding even more notebooks

[kolibril13]

And kernel died again at Python/11_Progress.ipynb
Only removing that one

[zivy]

Notebook 11 uses javascript and is not amenable to conversion (see testing).

[kolibril13]

Now 55 is dying:

Notebook error:
DeadKernelError in Python/55_VH_Resample.ipynb:
Kernel died

[kolibril13]

Now, there is a timeout error

[kolibril13]

added more notebooks

[kolibril13]

Now here:
Notebook error:
DeadKernelError in Python/03_Image_Details.ipynb:
Kernel died

Just randomly.