Development robert #88
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…s gray or black border depending on its color. made text larger, so that the snapshots are better readable
…into new_features_robert
…into new_features_robert
…nto development_robert
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…nto development_robert
TPTBox/core/nii_wrapper.py
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| data = _nrrd[0] | ||
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| header = dict(_nrrd[1]) | ||
| print(data.shape, header) |
TPTBox/core/nii_wrapper.py
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TPTBox/core/nii_wrapper_math.py
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| - B0 (b0): Number of connected components. | ||
| - B1 (b1): Number of holes. | ||
| - B2 (b2): Number of fully engulfed empty spaces. | ||
| - B2 (b2): Number of fully engulfed empty spaces.f |
TPTBox/mesh3D/html_preview.py
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| if isinstance(img, NII): | ||
| mesh = SegmentationMesh.from_segmentation_nii(img, rescale_to_iso=rescale_to_iso) | ||
| is_poi = False | ||
| else: |
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check if POI otherwise give ValueError
| poi = POI.load(Path(p, "sub-MM00191_ses-20180502_sequ-202_seg-leg-subreg-left_poi.mrk.json"), reference=nii) | ||
| nii_r = to_nii(Path(p, "sub-MM00191_ses-20180502_sequ-202_seg-leg-right_msk.nii.gz"), True) | ||
| poi_r = POI.load(Path(p, "sub-MM00191_ses-20180502_sequ-202_seg-leg-subreg-right_poi.mrk.json"), reference=nii) | ||
| make_html_preview( |
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