Reduce warnings

bbimber · bbimber · commit 4a5aa5b5c71f · 2026-02-03T10:42:22.000-08:00
diff --git a/jbrowse/src/org/labkey/jbrowse/model/JsonFile.java b/jbrowse/src/org/labkey/jbrowse/model/JsonFile.java
@@ -780,9 +780,9 @@ private JSONObject getTabixTrack(User u, Logger log, ExpData targetFile, Referen
             return null;
         }
 
-        if (!new File(targetFile.getFile() + ".tbi").exists())
+        if (!new File(gzipped.getPath() + ".tbi").exists())
         {
-            log.error("Track lacks an index: {}, expected: {}", getObjectId(), targetFile.getFile().getPath() + ".tbi");
+            log.error("Track lacks an index: {}, expected: {}", getObjectId(), gzipped.getPath() + ".tbi");
         }
 
         ret.put("adapter", new JSONObject(){{

Original file line number	Diff line number	Diff line change
`@@ -780,9 +780,9 @@ private JSONObject getTabixTrack(User u, Logger log, ExpData targetFile, Referen`
`780`	`780`	`return null;`
`781`	`781`	`}`
`782`	`782`
`783`		`- if (!new File(targetFile.getFile() + ".tbi").exists())`
	`783`	`+ if (!new File(gzipped.getPath() + ".tbi").exists())`
`784`	`784`	`{`
`785`		`- log.error("Track lacks an index: {}, expected: {}", getObjectId(), targetFile.getFile().getPath() + ".tbi");`
	`785`	`+ log.error("Track lacks an index: {}, expected: {}", getObjectId(), gzipped.getPath() + ".tbi");`
`786`	`786`	`}`
`787`	`787`
`788`	`788`	`ret.put("adapter", new JSONObject(){{`