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Add imagej-maven-plugin's integration tests
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‎src/it/copy-jars/pom.xml‎

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<!--
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#%L
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ImageJ software for multidimensional image processing and analysis.
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%%
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Copyright (C) 2012 - 2016 Board of Regents of the University of
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Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
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Institute of Molecular Cell Biology and Genetics.
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%%
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Redistribution and use in source and binary forms, with or without
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modification, are permitted provided that the following conditions are met:
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1. Redistributions of source code must retain the above copyright notice,
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this list of conditions and the following disclaimer.
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2. Redistributions in binary form must reproduce the above copyright notice,
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this list of conditions and the following disclaimer in the documentation
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and/or other materials provided with the distribution.
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THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
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LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
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CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
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SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
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INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
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CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
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ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
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POSSIBILITY OF SUCH DAMAGE.
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#L%
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-->
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
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<modelVersion>4.0.0</modelVersion>
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<groupId>org.apache.maven.plugin.my.unit</groupId>
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<artifactId>Example_PlugIn</artifactId>
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<version>1.0.0-SNAPSHOT</version>
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<packaging>jar</packaging>
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<name>An example ImageJ 1.x plugin to test scijava-maven-plugin's CopyJarsMojo</name>
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<dependencies>
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<dependency>
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<groupId>junit</groupId>
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<artifactId>junit</artifactId>
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<version>4.8.1</version>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>net.imagej</groupId>
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<artifactId>ij</artifactId>
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<version>1.48s</version>
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</dependency>
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</dependencies>
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<properties>
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<imagej.app.directory>${project.basedir}/target/ImageJ.app/</imagej.app.directory>
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<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
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</properties>
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<build>
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<plugins>
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<plugin>
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<groupId>org.scijava</groupId>
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<artifactId>scijava-maven-plugin</artifactId>
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<version>${scijava-maven.version}</version>
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<executions>
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<execution>
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<id>copy-jars</id>
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<phase>install</phase>
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<goals>
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<goal>copy-jars</goal>
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</goals>
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</execution>
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<execution>
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<id>install-artifact</id>
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<phase>install</phase>
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<goals>
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<goal>install-artifact</goal>
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</goals>
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<configuration>
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<imagejDirectory>${project.basedir}/target/Other.app/</imagejDirectory>
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<artifact>${project.groupId}:${project.artifactId}:${project.version}</artifact>
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</configuration>
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</execution>
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</executions>
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</plugin>
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</plugins>
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</build>
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</project>

‎src/it/copy-jars/setup.bsh‎

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/*
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* #%L
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* ImageJ software for multidimensional image processing and analysis.
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* %%
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* Copyright (C) 2012 - 2016 Board of Regents of the University of
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* Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
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* Institute of Molecular Cell Biology and Genetics.
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* %%
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* Redistribution and use in source and binary forms, with or without
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* modification, are permitted provided that the following conditions are met:
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*
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* 1. Redistributions of source code must retain the above copyright notice,
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* this list of conditions and the following disclaimer.
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* 2. Redistributions in binary form must reproduce the above copyright notice,
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* this list of conditions and the following disclaimer in the documentation
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* and/or other materials provided with the distribution.
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*
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* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
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* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
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* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
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* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
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* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
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* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
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* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
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* POSSIBILITY OF SUCH DAMAGE.
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* #L%
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*/
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source(new File(basedir, "../../../src/it/lib.bsh").getPath());
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if (!plugins.exists()) plugins.mkdirs();
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touchFile(new File(plugins, "Example_PlugIn-0.9.0-obsolete.jar"));

‎src/it/copy-jars/src/main/java/Example_PlugIn.java‎

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/*
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* #%L
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* ImageJ software for multidimensional image processing and analysis.
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* %%
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* Copyright (C) 2012 - 2016 Board of Regents of the University of
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* Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
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* Institute of Molecular Cell Biology and Genetics.
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* %%
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* Redistribution and use in source and binary forms, with or without
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* modification, are permitted provided that the following conditions are met:
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*
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* 1. Redistributions of source code must retain the above copyright notice,
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* this list of conditions and the following disclaimer.
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* 2. Redistributions in binary form must reproduce the above copyright notice,
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* this list of conditions and the following disclaimer in the documentation
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* and/or other materials provided with the distribution.
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*
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* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
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* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
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* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
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* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
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* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
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* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
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* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
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* POSSIBILITY OF SUCH DAMAGE.
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* #L%
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*/
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import ij.IJ;
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import ij.plugin.PlugIn;
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/**
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* A very simple plugin for testing purposes.
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*
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* @author Johannes Schindelin
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*/
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public class Example_PlugIn implements PlugIn {
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public void run(final String arg) {
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IJ.log("Hello, World!");
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}
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}

‎src/it/copy-jars/src/main/resources/plugins.config‎

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###
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# #%L
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# ImageJ software for multidimensional image processing and analysis.
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# %%
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# Copyright (C) 2012 - 2016 Board of Regents of the University of
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# Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
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# Institute of Molecular Cell Biology and Genetics.
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# %%
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# Redistribution and use in source and binary forms, with or without
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# modification, are permitted provided that the following conditions are met:
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#
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# 1. Redistributions of source code must retain the above copyright notice,
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# this list of conditions and the following disclaimer.
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# 2. Redistributions in binary form must reproduce the above copyright notice,
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# this list of conditions and the following disclaimer in the documentation
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# and/or other materials provided with the distribution.
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#
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# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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# ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
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# LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
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# CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
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# SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
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# INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
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# CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
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# ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
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# POSSIBILITY OF SUCH DAMAGE.
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# #L%
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###
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Example, "Plug In", Example_PlugIn

‎src/it/copy-jars/verify.bsh‎

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/*
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* #%L
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* ImageJ software for multidimensional image processing and analysis.
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* %%
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* Copyright (C) 2012 - 2016 Board of Regents of the University of
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* Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
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* Institute of Molecular Cell Biology and Genetics.
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* %%
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* Redistribution and use in source and binary forms, with or without
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* modification, are permitted provided that the following conditions are met:
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*
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* 1. Redistributions of source code must retain the above copyright notice,
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* this list of conditions and the following disclaimer.
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* 2. Redistributions in binary form must reproduce the above copyright notice,
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* this list of conditions and the following disclaimer in the documentation
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* and/or other materials provided with the distribution.
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*
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* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
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* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
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* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
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* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
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* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
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* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
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* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
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* POSSIBILITY OF SUCH DAMAGE.
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* #L%
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*/
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source(new File(basedir, "../../../src/it/lib.bsh").getPath());
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assertTrue("Should exist: " + plugin, plugin.exists());
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// install-artifact must not copy test scope dependencies
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junit = new File(ijDir, "../Other.app/jars/junit-4.8.1.jar");
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assertTrue("Should not exist: " + junit, !junit.exists());
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// but it must copy the ij dependency
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ij = new File(ijDir, "../Other.app/jars/ij-1.48s.jar");
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assertTrue("ImageJ 1.x was not copied: " + ij, ij.exists());

‎src/it/copy-to-subdirectory/pom.xml‎

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<!--
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#%L
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ImageJ software for multidimensional image processing and analysis.
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%%
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Copyright (C) 2012 - 2016 Board of Regents of the University of
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Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
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Institute of Molecular Cell Biology and Genetics.
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%%
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Redistribution and use in source and binary forms, with or without
10+
modification, are permitted provided that the following conditions are met:
11+
12+
1. Redistributions of source code must retain the above copyright notice,
13+
this list of conditions and the following disclaimer.
14+
2. Redistributions in binary form must reproduce the above copyright notice,
15+
this list of conditions and the following disclaimer in the documentation
16+
and/or other materials provided with the distribution.
17+
18+
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
19+
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
20+
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
22+
LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
23+
CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
24+
SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
25+
INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
26+
CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
27+
ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
28+
POSSIBILITY OF SUCH DAMAGE.
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#L%
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-->
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
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<modelVersion>4.0.0</modelVersion>
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<groupId>org.apache.maven.plugin.my.unit</groupId>
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<artifactId>Example_PlugIn</artifactId>
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<version>1.0.0-SNAPSHOT</version>
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<packaging>jar</packaging>
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<name>An example ImageJ 1.x plugin to test scijava-maven-plugin's CopyJarsMojo</name>
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<dependencies>
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<dependency>
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<groupId>net.imagej</groupId>
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<artifactId>ij</artifactId>
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<version>1.48s</version>
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</dependency>
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</dependencies>
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<properties>
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<imagej.app.directory>${project.basedir}/target/ImageJ.app/</imagej.app.directory>
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<imagej.app.subdirectory>plugins/Test/Directory/</imagej.app.subdirectory>
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<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
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</properties>
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<build>
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<plugins>
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<plugin>
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<groupId>org.scijava</groupId>
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<artifactId>scijava-maven-plugin</artifactId>
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<version>${scijava-maven.version}</version>
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<executions>
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<execution>
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<id>copy-jars</id>
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<phase>install</phase>
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<goals>
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<goal>copy-jars</goal>
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</goals>
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</execution>
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<execution>
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<id>install-artifact</id>
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<phase>install</phase>
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<goals>
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<goal>install-artifact</goal>
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</goals>
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<configuration>
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<imagejDirectory>${project.basedir}/target/Other.app/</imagejDirectory>
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<imagejSubdirectory>jars/Subdirectory/</imagejSubdirectory>
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<artifact>${project.groupId}:${project.artifactId}:${project.version}</artifact>
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</configuration>
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</execution>
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</executions>
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</plugin>
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</plugins>
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</build>
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</project>

‎src/it/copy-to-subdirectory/setup.bsh‎

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/*
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* #%L
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* ImageJ software for multidimensional image processing and analysis.
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* %%
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* Copyright (C) 2012 - 2016 Board of Regents of the University of
6+
* Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
7+
* Institute of Molecular Cell Biology and Genetics.
8+
* %%
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* Redistribution and use in source and binary forms, with or without
10+
* modification, are permitted provided that the following conditions are met:
11+
*
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* 1. Redistributions of source code must retain the above copyright notice,
13+
* this list of conditions and the following disclaimer.
14+
* 2. Redistributions in binary form must reproduce the above copyright notice,
15+
* this list of conditions and the following disclaimer in the documentation
16+
* and/or other materials provided with the distribution.
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*
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* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
19+
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
20+
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
21+
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
22+
* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
23+
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
24+
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
25+
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
26+
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
27+
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
28+
* POSSIBILITY OF SUCH DAMAGE.
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* #L%
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*/
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source(new File(basedir, "../../../src/it/lib.bsh").getPath());
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if (!plugins.exists()) plugins.mkdirs();

‎src/it/copy-to-subdirectory/src/main/resources/plugins.config‎

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###
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# #%L
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# ImageJ software for multidimensional image processing and analysis.
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# %%
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# Copyright (C) 2012 - 2016 Board of Regents of the University of
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# Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
7+
# Institute of Molecular Cell Biology and Genetics.
8+
# %%
9+
# Redistribution and use in source and binary forms, with or without
10+
# modification, are permitted provided that the following conditions are met:
11+
#
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# 1. Redistributions of source code must retain the above copyright notice,
13+
# this list of conditions and the following disclaimer.
14+
# 2. Redistributions in binary form must reproduce the above copyright notice,
15+
# this list of conditions and the following disclaimer in the documentation
16+
# and/or other materials provided with the distribution.
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#
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# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
19+
# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
20+
# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
21+
# ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
22+
# LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
23+
# CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
24+
# SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
25+
# INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
26+
# CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
27+
# ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
28+
# POSSIBILITY OF SUCH DAMAGE.
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# #L%
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###
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# Intentionally left blank

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