From fec3ea38d7376128fa99d5f6d6032909a865a09c Mon Sep 17 00:00:00 2001 From: Jeroen Ooms Date: Mon, 5 Jan 2026 23:02:14 +0100 Subject: [PATCH 1/2] Use reliable Bioconductor mirror --- R/bioc.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/R/bioc.R b/R/bioc.R index 0645af2b..aa3800f1 100644 --- a/R/bioc.R +++ b/R/bioc.R @@ -90,7 +90,7 @@ bioconductor <- local({ config_url <- function() { Sys.getenv( "R_BIOC_CONFIG_URL", - "https://bioconductor.org/config.yaml" + "https://bioconductor.posit.co/config.yaml" ) } From 93010c2f496705395f70c284c8925fe72bc092f3 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?G=C3=A1bor=20Cs=C3=A1rdi?= Date: Tue, 16 Jun 2026 11:23:50 +0200 Subject: [PATCH 2/2] Change default bioc mirror to posit bioconductor.org is unreliable for older bioc releases. --- R/bioc.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/R/bioc.R b/R/bioc.R index 61f79d15..d84c351e 100644 --- a/R/bioc.R +++ b/R/bioc.R @@ -309,7 +309,7 @@ bioconductor <- local({ } else { bioc_version <- package_version(bioc_version) } - mirror <- Sys.getenv("R_BIOC_MIRROR", "https://bioconductor.org") + mirror <- Sys.getenv("R_BIOC_MIRROR", "https://bioconductor.posit.co") mirror <- getOption("BioC_mirror", mirror) repos <- c( BioCsoft = "{mirror}/packages/{bv}/bioc",