diff --git a/snyder_conf/snyder_gfp_tf.conf b/snyder_conf/snyder_gfp_tf.conf
index 5db5eda..1e217f7 100644
--- a/snyder_conf/snyder_gfp_tf.conf
+++ b/snyder_conf/snyder_gfp_tf.conf
@@ -9764,7 +9764,7 @@ select       = name;
 	       EFL-1_L1 "EFL1 L1" = 3211;
 	       N2_EFL1_anti-EFL1_L1 "N2 EFL1 anti-EFL1 L1" = 3605;
                PIE1_EFL1_GFP_YA  "EFL1 YA" = 3072;
-               category     = Transcription Factors: GFP ChIP
+category     = Transcription Factors: GFP ChIP
 sort_order   = name
 stranded     = 0
 height       = 30
diff --git a/waterston_conf/waterston_dev.course.conf b/waterston_conf/waterston_dev.course.conf
index 7fce969..2d33c37 100644
--- a/waterston_conf/waterston_dev.course.conf
+++ b/waterston_conf/waterston_dev.course.conf
@@ -7284,7 +7284,7 @@ feature       = read_pair
 glyph         = segments
 data source   = 6540
 track source  = 
-cateogry      = RNA Expression Profiling:mRNA: polyA mRNA reads, developmental timecourse 
+category      = RNA Expression Profiling:mRNA: polyA mRNA reads, developmental timecourse 
 draw_target   = 1
 show_mismatch = 1
 mismatch_color= red
@@ -8749,80 +8749,6 @@ mean_color    = blue
 max_color     = lightblue
 height        = 20
 
-[submission_6540.sorted.bam]
-database      = submission_6540.sorted.bam_bam
-feature       = read_pair
-glyph         = segments
-data source   = 6540
-track source  = 
-cateogry      = RNA Expression Profiling:mRNA: polyA mRNA reads, developmental timecourse 
-draw_target   = 1
-show_mismatch = 1
-mismatch_color= red
-indel_color   = orange
-bgcolor       = black
-fgcolor       = black
-height        = 4
-label         = 1
-label_position= left
-label density = 50
-link          = sub {return "http://intermine.modencode.org/query/portal.do?externalid=modENCODE_6540&class=Submission";}
-bump          = fast
-connector     = sub {
-                  my $glyph = pop;
-                  return $glyph->level == 0 ? 'dashed' : 'solid';
-                }
-maxdepth      = 2
-box_subparts  = 2
-key           = L1LIN35-1cap1
-citation      = <h1>
-   Celegans Dev Timecourse Expression L1LIN35-1cap1 RNA-seq sequences and alignment 
-   (Waterston project, Waterston subgroup)
- </h1>
- <h2>Details</h2>
- <p>Place a submission-specific statement in here.</p>
- <h2>General Description</h2>
- <p>
- Using massively parallel sequencing by synthesis methods, we are surveying transcripts from various stages and strains of the nematode C. elegans. We use novel statistical approaches to evaluate coverage of annotated features of the genome and of candidate processed transcripts. 
- </p>
- <h2>Protocols</h2>
- <ol>
- <li>
- <b>Growth and isolation:</b>
-  <a href="http://wiki.modencode.org/project/index.php?title=Library_preparation_for_Illumina_Sequencing:RW:1&oldid=86312">Library preparation for Illumina Sequencing</a>,
-  <a href="http://wiki.modencode.org/project/index.php?title=Array_Capture:RW:1&oldid=57282">Array Capture</a>,
-  <a href="http://wiki.modencode.org/project/index.php?title=Worm_staging_and_isolation:RW:Reinke&oldid=82812">Staging_and_isolation</a>,
-  <a href="http://wiki.modencode.org/project/index.php?title=RNA_isolation:RW:Reinke&oldid=75164">RNA_isolation</a>,
-  <a href="http://wiki.modencode.org/project/index.php?title=Worm_growth:RW:Reinke&oldid=22843">Worm_growth</a>
- </li>
- <li>
- <b>Sample preparation:</b>
-  <a href="http://wiki.modencode.org/project/index.php?title=CDNA_amplification_with_random_hexamers_for_sequencing:RW:1&oldid=86308">cDNA amplification with random hexamers for sequencing</a>,
-  <a href="http://wiki.modencode.org/project/index.php?title=Illumina_single-end_sequencing_on_GAIIx:RW:UW&oldid=84076">Illumina single-end sequencing on GAIIx</a>     
- </li>
- <li>
- <b>Other Protocols:</b>
-  <a href="http://wiki.modencode.org/project/index.php?title=Raw_Coverage_Normalization:RW:1&oldid=75165">Normalization</a>,
-  <a href="http://wiki.modencode.org/project/index.php?title=RNA_Short_Read_Alignments:RW:Waterston.080901&oldid=81388">Alignment</a>
- </li>
- </ol>
- <ol>
- </ol>
- <ol>
- <li>
- <b>External Links:</b>
-  <a href="http://www.ncbi.nlm.nih.gov/sites/entrez?db=sra&report=full&term=SRR137925">SRR137925</a>,
-  <a href="http://www.ncbi.nlm.nih.gov/sites/entrez?db=sra&report=full&term=SRR139094">SRR139094</a>     
- </li>
- </ol>
- <br />
- <ul>
-  </ul>
-    <ul>
- </ul>
- <br />
- <b>Release Date:</b> 2013-11-06  Submission 6540
-
 [submission_6553.sorted.bam_bam:database]
 db_adaptor = Bio::DB::Sam
 db_args    = -fasta /browser_data/worm/fasta/c_elegans.WS220.genomic.fa