benchmark_quantifiers/test_P at master · khayer/benchmark_quantifiers · GitHub

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Algorithm	Measuerment	Mode	Dataset	Value
cufflinks	rmse	bias	VC_ENSEMBL_PERFECT	48.131
cufflinks	mrd	bias	VC_ENSEMBL_PERFECT	0.339
cufflinks	spcc	bias	VC_ENSEMBL_PERFECT	0.1054
cufflinks	rmse	default	VC_ENSEMBL_PERFECT	47.8203
cufflinks	mrd	default	VC_ENSEMBL_PERFECT	0.3491
cufflinks	spcc	default	VC_ENSEMBL_PERFECT	0.109
express	rmse	no_bias	VC_ENSEMBL_PERFECT	10.2737
express	mrd	no_bias	VC_ENSEMBL_PERFECT	2.0
express	spcc	no_bias	VC_ENSEMBL_PERFECT	0.0
express	rmse	no_error	VC_ENSEMBL_PERFECT	10.2737
express	mrd	no_error	VC_ENSEMBL_PERFECT	2.0
express	spcc	no_error	VC_ENSEMBL_PERFECT	0.0
express	rmse	default	VC_ENSEMBL_PERFECT	10.2737
express	mrd	default	VC_ENSEMBL_PERFECT	2.0
express	spcc	default	VC_ENSEMBL_PERFECT	0.0
isoem	rmse	bias	VC_ENSEMBL_PERFECT	117.9645
isoem	mrd	bias	VC_ENSEMBL_PERFECT	0.2809
isoem	spcc	bias	VC_ENSEMBL_PERFECT	0.0283
isoem	rmse	default	VC_ENSEMBL_PERFECT	104.0413
isoem	mrd	default	VC_ENSEMBL_PERFECT	0.134
isoem	spcc	default	VC_ENSEMBL_PERFECT	0.0374
isolasso	rmse	bias	VC_ENSEMBL_PERFECT	10.2737
isolasso	mrd	bias	VC_ENSEMBL_PERFECT	2.0
isolasso	spcc	bias	VC_ENSEMBL_PERFECT	0.0
isolasso	rmse	em	VC_ENSEMBL_PERFECT	10.2737
isolasso	mrd	em	VC_ENSEMBL_PERFECT	2.0
isolasso	spcc	em	VC_ENSEMBL_PERFECT	0.0
isolasso	rmse	default	VC_ENSEMBL_PERFECT	10.2737
isolasso	mrd	default	VC_ENSEMBL_PERFECT	2.0
isolasso	spcc	default	VC_ENSEMBL_PERFECT	0.0
kallisto	rmse	bias	VC_ENSEMBL_PERFECT	13.3063
kallisto	mrd	bias	VC_ENSEMBL_PERFECT	0.2033
kallisto	spcc	bias	VC_ENSEMBL_PERFECT	0.5884
kallisto	rmse	default	VC_ENSEMBL_PERFECT	13.3424
kallisto	mrd	default	VC_ENSEMBL_PERFECT	0.2033
kallisto	spcc	default	VC_ENSEMBL_PERFECT	0.5875
rsem	rmse	default	VC_ENSEMBL_PERFECT	53.7861
rsem	mrd	default	VC_ENSEMBL_PERFECT	0.1198
rsem	spcc	default	VC_ENSEMBL_PERFECT	0.091
sailfish	rmse	bias	VC_ENSEMBL_PERFECT	2.4489
sailfish	mrd	bias	VC_ENSEMBL_PERFECT	0.0394
sailfish	spcc	bias	VC_ENSEMBL_PERFECT	0.9771
sailfish	rmse	default	VC_ENSEMBL_PERFECT	13.4293
sailfish	mrd	default	VC_ENSEMBL_PERFECT	0.2097
sailfish	spcc	default	VC_ENSEMBL_PERFECT	0.5842
stringtie	rmse	default	VC_ENSEMBL_PERFECT	13.3897
stringtie	mrd	default	VC_ENSEMBL_PERFECT	0.2471
stringtie	spcc	default	VC_ENSEMBL_PERFECT	0.5023