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docs: correct links and directory names
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doc/source/quickstart.rst

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@@ -296,16 +296,16 @@ selected directory and plot resulting :math:`R_w` values from each morph.
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`PDFgui <https://www.diffpy.org/products/pdfgui.html>`_.
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8. Finally, let us save all the morphed PDFs into a directory
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named ``savedMorphs``. ::
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named ``saved-morphs``. ::
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pdfmorph SrFe2As2_150K.gr . --scale=1 --stretch=0 --multiple-targets \
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--sort-by=temperature --plot-parameter=stretch \
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--save=savedMorphs
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--sort-by=temperature --plot-parameter=stretch \
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--save=saved-morphs
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Entering the directory with ``cd`` and viewing its contents with
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``ls``, we see a file named ``Morph_Reference_Table.txt`` with data
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``ls``, we see a file named ``morph_reference_table.txt`` with data
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about the input morph parameters and re- fined output parameters
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and a directory named ``Morphs`` containing all the morphed
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and a directory named ``morphs`` containing all the morphed
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PDFs. See the ``--save-names-file`` option to see how you can set
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the names for these saved morphs!
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@@ -321,7 +321,8 @@ include: spheres and spheroids.
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``morphShape`` subdirectory. Inside, you will find a sample Ni bulk
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material PDF ``Ni_bulk.gr``. This PDF is from `"Atomic Pair
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Distribution Function Analysis:
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A primer" <https://github.com/Billingegroup/pdfttp_data/>`_.
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A primer" <https://global.oup.com/academic/product/
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atomic-pair-distribution-function-analysis-9780198885801>`_.
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There are also multiple ``.cgr`` files with calculated Ni nanoparticle PDFs.
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* Let us apply various shape effect morphs on the bulk material to

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