Merge pull request #95 from cadenmyers13/conf

Replace sys.path to pathlib.Path

Author: sbillinge

.github/workflows/docs.yml

@@ -0,0 +1,49 @@
+name: Build Documentation
+
+on:
+  push:
+    branches:
+      - main
+  release:
+    
+  pull_request:
+    branches:
+      - main
+
+
+jobs:
+  test:
+    runs-on: ubuntu-latest
+    defaults:
+      run:
+        shell: bash -l {0}
+    steps:
+      - uses: actions/checkout@v3
+        with:
+          fetch-depth: 0
+
+      - uses: conda-incubator/setup-miniconda@v2
+        with:
+          activate-environment: build
+          auto-update-conda: true
+
+      - name: install requirements
+        run: >-
+          conda install -n build -c conda-forge 
+          --file requirements/build.txt
+          --file requirements/run.txt
+          --file requirements/docs.txt
+          --quiet --yes
+
+      - name: install the package
+        run: python -m pip install . --no-deps
+
+      - name: build documents
+        run: make -C doc/manual html
+
+      - name: Deploy
+        if: github.event_name == 'push' && github.ref == 'refs/heads/main'
+        uses: peaceiris/actions-gh-pages@v3
+        with:
+          github_token: ${{ secrets.GITHUB_TOKEN }}
+          publish_dir: ./doc/manual/build/html

.pre-commit-config.yaml

@@ -0,0 +1,33 @@
+default_language_version:
+    python: python3
+repos:
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v4.4.0
+    hooks:
+      - id: check-yaml
+      - id: end-of-file-fixer
+      - id: trailing-whitespace
+  - repo: https://github.com/ambv/black
+    rev: 23.3.0
+    hooks:
+      - id: black
+  - repo: https://github.com/pycqa/flake8
+    rev: 6.0.0
+    hooks:
+      - id: flake8
+  - repo: https://github.com/pycqa/isort
+    rev: 5.12.0
+    hooks:
+      - id: isort
+        args: ["--profile", "black"]
+  - repo: https://github.com/kynan/nbstripout
+    rev: 0.6.1
+    hooks:
+      - id: nbstripout
+  - repo: local
+    hooks:
+      - id: prevent-commit-to-main
+        name: Prevent Commit to Main Branch
+        entry: ./prevent_commit_to_main.sh
+        language: script
+        stages: [commit]

README.rst

@@ -150,6 +150,24 @@ rather than copied to a system directory, use ::
 
      python -m pip install -e .
 
+CONTRIBUTING
+------------------------------------------------------------------------
+We welcome contributors from the community.  Please consider posting issues, and taking issues and posting PRs.
+
+To ensure code quality and to prevent accidental commits into the default branch, please set up the use of our pre-commit
+hooks.
+
+1. modify the permissions to executable on the bash script called ``prevent_commit_to_main.sh`` in this directory: ``chmod +x prevent_commit_to_main.sh``
+
+2. install pre-commit in your working environment with ``conda install pre-commit``
+
+3. initialize pre-commit (one time only) ``pre-commit install``
+
+Thereafter your code will be linted by black and isort and checked against flake8 before you can commit.
+If it fails by black or isort, just rerun and it should pass (black and isort will modify the files so should
+pass after they are modified).  If the flake8 test fails please see the error messages and fix them manually before
+trying to commit again
+
 
 CONTACTS
 ------------------------------------------------------------------------