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setup.py
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42 lines (33 loc) · 1.04 KB
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from setuptools import setup
from setuptools import find_packages
def readme():
with open('README.md', encoding='utf-8') as file:
return file.read()
setup(
name='LocText',
version='1.0.1',
description='NLP-based Relation Extraction (RE) of: Proteins <--> Cell Compartments',
long_description=readme(),
url='https://github.com/Rostlab/LocText',
author='Juan Miguel Cejuela, Shrikant Vinchurkar',
author_email='loctext@rostlab.org',
packages=find_packages(exclude=['tests']),
test_suite='pytest-runner',
setup_requires=['pytest'],
dependency_links=[
'git+https://github.com/Rostlab/nalaf.git@feature/performance_check#egg=nalaf'
],
install_requires=[
# ML
'nalaf == 0.2.2',
'numpy == 1.11.2',
'scipy == 0.18.1', # or 0.19.0
'scikit-learn == 0.18.1',
'spacy == 1.2.0',
'nltk == 3.2.1',
# Other
'requests',
'requests_cache >= 0.4.13',
'ujson', # It should be included with spacy, AFAIK
]
)