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Support PEtab SciML problems and enable linting #3616

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Run time

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Job	Run time
build (macos-latest, 3.11)	2m 49s
build (ubuntu-latest, 3.11)	2m 48s
build (ubuntu-latest, 3.14)	2m 47s
build (windows-latest, 3.11)	2m 40s
build (windows-latest, 3.14)	2m 40s
build (macos-latest, 3.14)	2m 32s
	16m 16s