From 774327c4a9dc77c58167f035e26b9d18df821566 Mon Sep 17 00:00:00 2001 From: Brian Shand Date: Tue, 19 May 2026 14:09:08 +0100 Subject: [PATCH] Germline refresh should ignore new RJ1 (Guy's) data files [NDRS2-3673] --- lib/import/brca/scripts/bash/Import_all_brca_interactive.sh | 1 + 1 file changed, 1 insertion(+) diff --git a/lib/import/brca/scripts/bash/Import_all_brca_interactive.sh b/lib/import/brca/scripts/bash/Import_all_brca_interactive.sh index 74a91f25..1db5ebd4 100755 --- a/lib/import/brca/scripts/bash/Import_all_brca_interactive.sh +++ b/lib/import/brca/scripts/bash/Import_all_brca_interactive.sh @@ -152,6 +152,7 @@ MBIS=$1 PROV='RJ1' IFS=$'\n' for x in $(find $DIRPATH/$FILEPATH -type f -name "*.pseudo" -path "*/$PROV/*" \ +-not -path "*/2026/*" \ ! -name ""Dummy_Pseudo_RJ1.pseudo) do IFS="$OIFS"