Feature-IOPS-2715-Update-ServiceRequest-&-Bundle-Examples using CodeSystem-reason-for-testing (#98)

KazeemHamzat · web-flow · commit 4903088c4773 · 2024-07-29T10:10:58.000+01:00
* Update ServiceRequest-NonWGSTestOrder-VariantReinterpretation-Example

Changes to codesystems for orderDetails &amp; reasonCodes

* Update SR and Bundle-CancerSolidTumor-Example

Update to reasonCpde

* Update ServiceRequest-NonWGSTestOrderForm-CascadeTesting-Example

Update to reasonCode

* Update ServiceRequest-NonWGSTestOrderForm-DeceasedPatient-Example

Update to reasonCode

* Update SR &amp; Bundles

Update to reasonCode

* Update SR &amp; Bundles

Update codesystems for ServiceRequest.reasonCode &amp; orderDetails

* Update NHSDigital-ServiceRequest-Genomics.StructureDefinition.

Re-arrange slice names in alphabetic order

* Update SR &amp; Bundles

Correcting typo error.
diff --git a/Bundle/Bundle-NonWGSTestOrderForm-CancerSolidTumor-Example.json b/Bundle/Bundle-NonWGSTestOrderForm-CancerSolidTumor-Example.json
@@ -527,9 +527,9 @@
           {
             "coding": [
               {
-                "system": "http://snomed.info/sct",
-                "code": "335741000000100",
-                "display": "Recurrence of tumour"
+                "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+                "code": "relapse",
+                "display": "Relapse"
               }
             ]
           }
diff --git a/Bundle/Bundle-NonWGSTestOrderForm-Example.json b/Bundle/Bundle-NonWGSTestOrderForm-Example.json
@@ -263,9 +263,9 @@
           {
             "coding": [
               {
-                "system": "http://snomed.info/sct",
-                "code": "165196007",
-                "display": "Procedures related to diagnosis (procedure)"
+                "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+                "code": "diagnostic",
+                "display": "Diagnostic"
               }
             ]
           }
diff --git a/Bundle/Bundle-NonWGSTestOrderForm-FetalScenario-Example.json b/Bundle/Bundle-NonWGSTestOrderForm-FetalScenario-Example.json
@@ -344,9 +344,9 @@
           {
             "coding": [
               {
-                "system": "http://snomed.info/sct",
-                "code": "243787009",
-                "display": "Antenatal screening"
+                "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+                "code": "staging-or-prognosis",
+                "display": "Staging or Prognosis"
               }
             ]
           }
@@ -460,9 +460,9 @@
           {
             "coding": [
               {
-                "system": "http://snomed.info/sct",
-                "code": "243787009",
-                "display": "Antenatal screening"
+                "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+                "code": "staging-or-prognosis",
+                "display": "Staging or Prognosis"
               }
             ]
           }
diff --git a/Bundle/Bundle-NonWGSTestOrderForm-Reanalysis-Example.json b/Bundle/Bundle-NonWGSTestOrderForm-Reanalysis-Example.json
@@ -283,9 +283,9 @@
           {
             "coding": [
               {
-                "system": "https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory",
-                "code": "719641000000101",
-                "display": "Data analysis (qualifier value)"
+                "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+                "code": "new-treatment-clinical-management",
+                "display": "New Treatment/Clinical Management"
               }
             ],
             "text": "Significant new treatment and or clinical management implication for the patient.Please provide details/treatment for management of epilepsy"
diff --git a/Bundle/Bundle-TransactionResponseSuccess-Example.json b/Bundle/Bundle-TransactionResponseSuccess-Example.json
@@ -63,9 +63,9 @@
           {
             "coding": [
               {
-                "system": "http://snomed.info/sct",
-                "code": "165196007",
-                "display": "Procedures related to diagnosis (procedure)"
+                "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+                "code": "diagnostic",
+                "display": "Diagnostic"
               }
             ]
           }
diff --git a/Bundle/Bundle-WGSTestOrderForm-Example.json b/Bundle/Bundle-WGSTestOrderForm-Example.json
@@ -257,9 +257,9 @@
           {
             "coding": [
               {
-                "system": "http://snomed.info/sct",
-                "code": "165196007",
-                "display": "Procedures related to diagnosis (procedure)"
+                "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+                "code": "diagnostic",
+                "display": "Diagnostic"
               }
             ]
           }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrder-VariantReinterpretation-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrder-VariantReinterpretation-Example.json
@@ -51,6 +51,15 @@
           "display": "Early onset or syndromic epilepsy"
         }
       ]
+    },
+    {
+      "coding": [
+        {
+          "system": "https://fhir.nhs.uk/CodeSystem/types-of-reanalysistest-genomics",
+          "code": "original-gene-panels",
+          "display": "Original Gene Panels"
+        }
+      ]
     }
   ],
   "subject": {
@@ -68,8 +77,8 @@
     {
       "coding": [
         {
-          "system": "https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory",
-          "code": "261004008",
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "diagnostic",
           "display": "Diagnostic"
         }
       ]
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-Cancellation-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-Cancellation-Example.json
@@ -53,9 +53,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "165196007",
-          "display": "Procedures related to diagnosis (procedure)"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "diagnostic",
+          "display": "Diagnostic"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-CancerSolidTumor-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-CancerSolidTumor-Example.json
@@ -59,9 +59,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "335741000000100",
-          "display": "Recurrence of tumour"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "relapse",
+          "display": "Relapse"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-CascadeTesting-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-CascadeTesting-Example.json
@@ -58,9 +58,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "473145005",
-          "display": "Possible familial hypercholesterolemia"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "predictive",
+          "display": "Predictive"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-DeceasedPatient-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-DeceasedPatient-Example.json
@@ -53,9 +53,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "165196007",
-          "display": "Procedures related to diagnosis (procedure)"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "diagnostic",
+          "display": "Diagnostic"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-Example.json
@@ -53,9 +53,9 @@
 		{
 			"coding": [
 				{
-					"system": "http://snomed.info/sct",
-					"code": "165196007",
-					"display": "Procedures related to diagnosis (procedure)"
+					"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+					"code": "diagnostic",
+					"display": "Diagnostic"
 				}
 			]
 		}
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example.json
@@ -61,9 +61,9 @@
 		{
 			"coding": [
 				{
-					"system": "http://snomed.info/sct",
-					"code": "243787009",
-					"display": "Antenatal screening"
+					"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+					"code": "staging-or-prognosis",
+					"display": "Staging or Prognosis"
 				}
 			]
 		}
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FollowupTest-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FollowupTest-Example.json
@@ -53,9 +53,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-        "code": "165196007",
-        "display": "Procedures related to diagnosis (procedure)"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+        "code": "diagnostic",
+        "display": "Diagnostic"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-HaemOncology-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-HaemOncology-Example.json
@@ -53,9 +53,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "441308009",
-          "display": "New diagnosis"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "diagnostic",
+          "display": "Diagnostic"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-HaemOncologyUpdated-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-HaemOncologyUpdated-Example.json
@@ -57,9 +57,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "441308009",
-          "display": "New diagnosis"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "diagnostic",
+          "display": "Diagnostic"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-NewFollowupTest-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-NewFollowupTest-Example.json
@@ -59,9 +59,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-         "code": "165196007",
-        "display": "Procedures related to diagnosis (procedure)"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "diagnostic",
+          "display": "Diagnostic"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-OutOfCountry-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-OutOfCountry-Example.json
@@ -59,9 +59,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "165196007",
-          "display": "Procedures related to diagnosis (procedure)"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "diagnostic",
+          "display": "Diagnostic"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-ReAnalysis-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-ReAnalysis-Example.json
@@ -68,9 +68,9 @@
     {
       "coding": [
         {
-          "system": "https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory",
-          "code": "719641000000101",
-          "display": "Data analysis (qualifier value)"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "new-treatment-clinical-management",
+          "display": "New Treatment/Clinical Management"
         }
       ],
       "text": "Significant new treatment and or clinical management implication for the patient.Please provide details/treatment for management of epilepsy"
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-UsingStoredSample-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderForm-UsingStoredSample-Example.json
@@ -53,9 +53,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "1186936003",
-          "display": "Storage of specimen"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "dna-storage",
+          "display": "DNA Storage"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderFormUpdated-Cancellation-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderFormUpdated-Cancellation-Example.json
@@ -57,9 +57,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "165196007",
-          "display": "Procedures related to diagnosis (procedure)"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "diagnostic",
+          "display": "Diagnostic"
         }
       ]
     }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderFormUpdated-FetalScenario-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderFormUpdated-FetalScenario-Example.json
@@ -1,10 +1,10 @@
 {
 	"resourceType": "ServiceRequest",
 	"id": "ServiceRequest-NonWGSTestOrderFormUpdated-FetalScenario-Example",
-    "meta": {
-      "versionId": "2",
-      "lastUpdated": "2023-09-26T10:00:00Z"
-    },
+	"meta": {
+		"versionId": "2",
+		"lastUpdated": "2023-09-26T10:00:00Z"
+	},
 	"extension": [
 		{
 			"url": "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-Coverage",
@@ -65,15 +65,14 @@
 		{
 			"coding": [
 				{
-					"system": "http://snomed.info/sct",
-					"code": "243787009",
-					"display": "Antenatal screening"
+					"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+					"code": "staging-or-prognosis",
+					"display": "Staging or Prognosis"
 				}
 			]
 		}
 	],
 	"supportingInfo": [
-
 		{
 			"reference": "Observation/Observation-HistoryOfFetalLoss-Example"
 		},
@@ -101,9 +100,9 @@
 		{
 			"reference": "Procedure/Procedure-InVitroFertilisation-Example"
 		},
-    {
-      "reference": "Specimen/Specimen-BloodEDTA-Example"
-    },
+		{
+			"reference": "Specimen/Specimen-BloodEDTA-Example"
+		},
 		{
 			"reference": "Specimen/Specimen-RyanneBoulderSaliva-Example"
 		},
@@ -119,9 +118,9 @@
 			"text": "Free text for diagnosis/reason for referral, relevant information including family history, phenotypic details/ HPO Terms/ E.g. large echogenic kidneys with normal bladder"
 		}
 	],
-  "relevantHistory": [
-    {
-      "reference": "Provenance/Provenance-NonWGSTestOrderForm-FetalScenario-Example"
-    }
-  ]
+	"relevantHistory": [
+		{
+			"reference": "Provenance/Provenance-NonWGSTestOrderForm-FetalScenario-Example"
+		}
+	]
 }
diff --git a/ServiceRequest/ServiceRequest-NonWGSTestOrderFormUpdated-SolidTumor-Example.json b/ServiceRequest/ServiceRequest-NonWGSTestOrderFormUpdated-SolidTumor-Example.json
@@ -1,10 +1,10 @@
 {
   "resourceType": "ServiceRequest",
   "id": "ServiceRequest-NonWGSTestOrderFormUpdated-SolidTumor-Example",
-    "meta": {
-      "versionId": "3",
-      "lastUpdated": "2023-08-08T15:43:00Z"
-    },
+  "meta": {
+    "versionId": "3",
+    "lastUpdated": "2023-08-08T15:43:00Z"
+  },
   "extension": [
     {
       "url": "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-Coverage",
@@ -63,9 +63,9 @@
     {
       "coding": [
         {
-          "system": "http://snomed.info/sct",
-          "code": "335741000000100",
-          "display": "Recurrence of tumour"
+          "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
+          "code": "relapse",
+          "display": "Relapse"
         }
       ]
     }
@@ -80,7 +80,6 @@
     }
   ],
   "supportingInfo": [
-   
     {
       "reference": "Observation/Observation-Cellularity-Example"
     },
diff --git a/ServiceRequest/ServiceRequest-SavedTestOrder-Example.json b/ServiceRequest/ServiceRequest-SavedTestOrder-Example.json
diff --git a/ServiceRequest/ServiceRequest-SavedTestOrderUpdated-CascadeTesting-Example.json b/ServiceRequest/ServiceRequest-SavedTestOrderUpdated-CascadeTesting-Example.json
diff --git a/ServiceRequest/ServiceRequest-SavedTestOrderUpdated-Example.json b/ServiceRequest/ServiceRequest-SavedTestOrderUpdated-Example.json
diff --git a/ServiceRequest/ServiceRequest-SavedTestOrderWGS-Example.json b/ServiceRequest/ServiceRequest-SavedTestOrderWGS-Example.json
diff --git a/ServiceRequest/ServiceRequest-TestOrderForm-StorageOfMaterial-Example.json b/ServiceRequest/ServiceRequest-TestOrderForm-StorageOfMaterial-Example.json
diff --git a/ServiceRequest/ServiceRequest-WGSTestOrderForm-DirectToLab-Example.json b/ServiceRequest/ServiceRequest-WGSTestOrderForm-DirectToLab-Example.json
diff --git a/ServiceRequest/ServiceRequest-WGSTestOrderForm-Example.json b/ServiceRequest/ServiceRequest-WGSTestOrderForm-Example.json
diff --git a/ServiceRequest/ServiceRequest-WGSTestOrderForm-TrioTestingProband-Example.json b/ServiceRequest/ServiceRequest-WGSTestOrderForm-TrioTestingProband-Example.json
diff --git a/ServiceRequest/ServiceRequest-WGSTestOrderFormUpdated-DirectToLab-Example.json b/ServiceRequest/ServiceRequest-WGSTestOrderFormUpdated-DirectToLab-Example.json
diff --git a/ServiceRequest/ServiceRequest-WGSTestOrderFormUpdated-TrioTesting-Example.json b/ServiceRequest/ServiceRequest-WGSTestOrderFormUpdated-TrioTesting-Example.json
diff --git a/StructureDefinition/NHSDigital-ServiceRequest-Genomics.StructureDefinition.json b/StructureDefinition/NHSDigital-ServiceRequest-Genomics.StructureDefinition.json

Original file line number	Diff line number	Diff line change
`@@ -527,9 +527,9 @@`
`527`	`527`	`{`
`528`	`528`	`"coding": [`
`529`	`529`	`{`
`530`		`- "system": "http://snomed.info/sct",`
`531`		`- "code": "335741000000100",`
`532`		`- "display": "Recurrence of tumour"`
	`530`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`531`	`+ "code": "relapse",`
	`532`	`+ "display": "Relapse"`
`533`	`533`	`}`
`534`	`534`	`]`
`535`	`535`	`}`
Original file line number	Diff line number	Diff line change
`@@ -263,9 +263,9 @@`
`263`	`263`	`{`
`264`	`264`	`"coding": [`
`265`	`265`	`{`
`266`		`- "system": "http://snomed.info/sct",`
`267`		`- "code": "165196007",`
`268`		`- "display": "Procedures related to diagnosis (procedure)"`
	`266`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`267`	`+ "code": "diagnostic",`
	`268`	`+ "display": "Diagnostic"`
`269`	`269`	`}`
`270`	`270`	`]`
`271`	`271`	`}`
Original file line number	Diff line number	Diff line change
`@@ -344,9 +344,9 @@`
`344`	`344`	`{`
`345`	`345`	`"coding": [`
`346`	`346`	`{`
`347`		`- "system": "http://snomed.info/sct",`
`348`		`- "code": "243787009",`
`349`		`- "display": "Antenatal screening"`
	`347`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`348`	`+ "code": "staging-or-prognosis",`
	`349`	`+ "display": "Staging or Prognosis"`
`350`	`350`	`}`
`351`	`351`	`]`
`352`	`352`	`}`
`@@ -460,9 +460,9 @@`
`460`	`460`	`{`
`461`	`461`	`"coding": [`
`462`	`462`	`{`
`463`		`- "system": "http://snomed.info/sct",`
`464`		`- "code": "243787009",`
`465`		`- "display": "Antenatal screening"`
	`463`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`464`	`+ "code": "staging-or-prognosis",`
	`465`	`+ "display": "Staging or Prognosis"`
`466`	`466`	`}`
`467`	`467`	`]`
`468`	`468`	`}`
Original file line number	Diff line number	Diff line change
`@@ -283,9 +283,9 @@`
`283`	`283`	`{`
`284`	`284`	`"coding": [`
`285`	`285`	`{`
`286`		`- "system": "https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory",`
`287`		`- "code": "719641000000101",`
`288`		`- "display": "Data analysis (qualifier value)"`
	`286`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`287`	`+ "code": "new-treatment-clinical-management",`
	`288`	`+ "display": "New Treatment/Clinical Management"`
`289`	`289`	`}`
`290`	`290`	`],`
`291`	`291`	`"text": "Significant new treatment and or clinical management implication for the patient.Please provide details/treatment for management of epilepsy"`
Original file line number	Diff line number	Diff line change
`@@ -63,9 +63,9 @@`
`63`	`63`	`{`
`64`	`64`	`"coding": [`
`65`	`65`	`{`
`66`		`- "system": "http://snomed.info/sct",`
`67`		`- "code": "165196007",`
`68`		`- "display": "Procedures related to diagnosis (procedure)"`
	`66`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`67`	`+ "code": "diagnostic",`
	`68`	`+ "display": "Diagnostic"`
`69`	`69`	`}`
`70`	`70`	`]`
`71`	`71`	`}`
Original file line number	Diff line number	Diff line change
`@@ -257,9 +257,9 @@`
`257`	`257`	`{`
`258`	`258`	`"coding": [`
`259`	`259`	`{`
`260`		`- "system": "http://snomed.info/sct",`
`261`		`- "code": "165196007",`
`262`		`- "display": "Procedures related to diagnosis (procedure)"`
	`260`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`261`	`+ "code": "diagnostic",`
	`262`	`+ "display": "Diagnostic"`
`263`	`263`	`}`
`264`	`264`	`]`
`265`	`265`	`}`
Original file line number	Diff line number	Diff line change
`@@ -51,6 +51,15 @@`
`51`	`51`	`"display": "Early onset or syndromic epilepsy"`
`52`	`52`	`}`
`53`	`53`	`]`
	`54`	`+ },`
	`55`	`+ {`
	`56`	`+ "coding": [`
	`57`	`+ {`
	`58`	`+ "system": "https://fhir.nhs.uk/CodeSystem/types-of-reanalysistest-genomics",`
	`59`	`+ "code": "original-gene-panels",`
	`60`	`+ "display": "Original Gene Panels"`
	`61`	`+ }`
	`62`	`+ ]`
`54`	`63`	`}`
`55`	`64`	`],`
`56`	`65`	`"subject": {`
`@@ -68,8 +77,8 @@`
`68`	`77`	`{`
`69`	`78`	`"coding": [`
`70`	`79`	`{`
`71`		`- "system": "https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory",`
`72`		`- "code": "261004008",`
	`80`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`81`	`+ "code": "diagnostic",`
`73`	`82`	`"display": "Diagnostic"`
`74`	`83`	`}`
`75`	`84`	`]`
Original file line number	Diff line number	Diff line change
`@@ -53,9 +53,9 @@`
`53`	`53`	`{`
`54`	`54`	`"coding": [`
`55`	`55`	`{`
`56`		`- "system": "http://snomed.info/sct",`
`57`		`- "code": "165196007",`
`58`		`- "display": "Procedures related to diagnosis (procedure)"`
	`56`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`57`	`+ "code": "diagnostic",`
	`58`	`+ "display": "Diagnostic"`
`59`	`59`	`}`
`60`	`60`	`]`
`61`	`61`	`}`
Original file line number	Diff line number	Diff line change
`@@ -59,9 +59,9 @@`
`59`	`59`	`{`
`60`	`60`	`"coding": [`
`61`	`61`	`{`
`62`		`- "system": "http://snomed.info/sct",`
`63`		`- "code": "335741000000100",`
`64`		`- "display": "Recurrence of tumour"`
	`62`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`63`	`+ "code": "relapse",`
	`64`	`+ "display": "Relapse"`
`65`	`65`	`}`
`66`	`66`	`]`
`67`	`67`	`}`
Original file line number	Diff line number	Diff line change
`@@ -58,9 +58,9 @@`
`58`	`58`	`{`
`59`	`59`	`"coding": [`
`60`	`60`	`{`
`61`		`- "system": "http://snomed.info/sct",`
`62`		`- "code": "473145005",`
`63`		`- "display": "Possible familial hypercholesterolemia"`
	`61`	`+ "system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",`
	`62`	`+ "code": "predictive",`
	`63`	`+ "display": "Predictive"`
`64`	`64`	`}`
`65`	`65`	`]`
`66`	`66`	`}`