Add --memory to deepvariant docker command

Author: bbimber

SequenceAnalysis/src/org/labkey/sequenceanalysis/run/analysis/DeepVariantAnalysis.java

@@ -251,6 +251,12 @@ public void execute(File inputBam, File refFasta, File outputGvcf, PipelineOutpu
                 writer.println("\t-e USERID=$UID \\");
                 writer.println("\t--entrypoint /bin/bash \\");
                 writer.println("\t-w /work \\");
+                Integer maxRam = SequencePipelineService.get().getMaxRam();
+                if (maxRam != null)
+                {
+                    writer.println("\t-e SEQUENCEANALYSIS_MAX_RAM=" + maxRam + " \\");
+                    writer.println("\t--memory='" + maxRam + "g' \\");
+                }
                 writer.println("\tgoogle/deepvariant:" + binVersion + " \\");
                 writer.println("\t/work/" + dockerBashScript.getName());
                 writer.println("EXIT_CODE=$?");