Merge pull request #224 from BimberLab/23.7_fb_merge

Merge discvr-23.3 to discvr-23.7

Author: bbimber

SequenceAnalysis/build.gradle

@@ -50,7 +50,7 @@ dependencies {
     BuildUtils.addExternalDependency(
             project,
             new ExternalDependency(
-                    'org.biojava:biojava-core:6.0.4',
+                    'org.biojava:biojava-core:7.0.2',
                     'biojava-core',
                     'biojava',
                     'http://biojava.org/wiki/Main_Page',
@@ -68,7 +68,7 @@ dependencies {
     BuildUtils.addExternalDependency(
             project,
             new ExternalDependency(
-                    'org.biojava:biojava-genome:6.0.4',
+                    'org.biojava:biojava-genome:7.0.2',
                     'biojava-genome',
                     'biojava',
                     'http://biojava.org/wiki/Main_Page',

jbrowse/build.gradle

@@ -1,7 +1,5 @@
 import org.labkey.gradle.util.BuildUtils;
 
-final String luceneVersion="9.4.2"
-
 repositories {
 	mavenCentral()
 	// Added for org.clojars.chapmanb:sam dependency required by com.github.samtools:htsjdk