Register CellHashingService before pipeline load

bbimber · bbimber · commit fcc70eeec465 · 2020-12-29T16:32:15.000-08:00
diff --git a/singlecell/src/org/labkey/singlecell/SingleCellModule.java b/singlecell/src/org/labkey/singlecell/SingleCellModule.java
@@ -104,8 +104,6 @@ protected void doStartupAfterSpringConfig(ModuleContext moduleContext)
     {
         super.doStartupAfterSpringConfig(moduleContext);
 
-        CellHashingService.setInstance(CellHashingServiceImpl.get());
-
         LaboratoryService.get().registerDataProvider(new SingleCellProvider(this));
         SequenceAnalysisService.get().registerDataProvider(new SingleCellProvider(this));
 
@@ -122,6 +120,8 @@ protected void doStartupAfterSpringConfig(ModuleContext moduleContext)
 
     public static void registerPipelineSteps()
     {
+        CellHashingService.setInstance(CellHashingServiceImpl.get());
+
         SequencePipelineService.get().registerPipelineStep(new CellRangerWrapper.Provider());
         SequencePipelineService.get().registerPipelineStep(new CellRangerVDJWrapper.VDJProvider());
 

Original file line number	Diff line number	Diff line change
`@@ -104,8 +104,6 @@ protected void doStartupAfterSpringConfig(ModuleContext moduleContext)`
`104`	`104`	`{`
`105`	`105`	`super.doStartupAfterSpringConfig(moduleContext);`
`106`	`106`
`107`		`- CellHashingService.setInstance(CellHashingServiceImpl.get());`
`108`		`-`
`109`	`107`	`LaboratoryService.get().registerDataProvider(new SingleCellProvider(this));`
`110`	`108`	`SequenceAnalysisService.get().registerDataProvider(new SingleCellProvider(this));`
`111`	`109`
`@@ -122,6 +120,8 @@ protected void doStartupAfterSpringConfig(ModuleContext moduleContext)`
`122`	`120`
`123`	`121`	`public static void registerPipelineSteps()`
`124`	`122`	`{`
	`123`	`+ CellHashingService.setInstance(CellHashingServiceImpl.get());`
	`124`	`+`
`125`	`125`	`SequencePipelineService.get().registerPipelineStep(new CellRangerWrapper.Provider());`
`126`	`126`	`SequencePipelineService.get().registerPipelineStep(new CellRangerVDJWrapper.VDJProvider());`
`127`	`127`