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Minor improvements to cDNA import
1 parent e844e38 commit ea3a609

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2 files changed

+12
-21
lines changed

2 files changed

+12
-21
lines changed

singlecell/resources/web/singlecell/panel/LibraryExportPanel.js

Lines changed: 6 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -134,7 +134,7 @@ Ext4.define('SingleCell.panel.LibraryExportPanel', {
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itemId: 'hashingPrefix',
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fieldLabel: 'Hashing Library Prefix',
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labelWidth: 160,
137-
value: 'H'
137+
value: 'M'
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},{
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xtype: 'checkbox',
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itemId: 'autoAssignLane',
@@ -386,6 +386,7 @@ Ext4.define('SingleCell.panel.LibraryExportPanel', {
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Ext4.Msg.wait('Loading...');
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var readsetIds = Ext4.Object.getKeys(readsetIdToLane);
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LABKEY.Query.selectRows({
389+
method: 'POST',
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containerPath: Laboratory.Utils.getQueryContainerPath(),
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schemaName: 'sequenceanalysis',
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queryName: 'sequence_readsets',
@@ -439,6 +440,7 @@ Ext4.define('SingleCell.panel.LibraryExportPanel', {
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if (workbook) {
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Ext4.Msg.wait('Loading...');
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LABKEY.Query.selectRows({
443+
method: 'POST',
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containerPath: Laboratory.Utils.getQueryContainerPath(),
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schemaName: 'core',
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queryName: 'workbooks',
@@ -481,6 +483,7 @@ Ext4.define('SingleCell.panel.LibraryExportPanel', {
481483

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Ext4.Msg.wait('Loading...');
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LABKEY.Query.selectRows({
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method: 'POST',
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schemaName: 'sequenceanalysis',
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queryName: 'barcodes',
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sort: 'group_name,tag_name',
@@ -517,6 +520,7 @@ Ext4.define('SingleCell.panel.LibraryExportPanel', {
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batchesToCreate = Ext4.Array.unique(batchesToCreate);
518521

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LABKEY.Query.insertRows({
523+
method: 'POST',
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containerPath: containerId,
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schemaName: 'sequenceanalysis',
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queryName: 'instrument_runs',
@@ -539,6 +543,7 @@ Ext4.define('SingleCell.panel.LibraryExportPanel', {
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}, this);
540544

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LABKEY.Query.updateRows({
546+
method: 'POST',
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containerPath: Laboratory.Utils.getQueryContainerPath(),
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schemaName: 'sequenceanalysis',
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queryName: 'sequence_readsets',

singlecell/resources/web/singlecell/panel/cDNAImportPanel.js

Lines changed: 6 additions & 20 deletions
Original file line numberDiff line numberDiff line change
@@ -137,26 +137,12 @@ Ext4.define('SingleCell.panel.cDNAImportPanel', {
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fieldLabel: 'Use 10x V2/HT (Dual Index)',
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itemId: 'useDualIndex',
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checked: true,
140-
listeners: {
141-
change: function(field, val){
142-
field.up('panel').down('#barcodeSeries').setValue(field.getValue() ? 'SI-TT' : 'SI-GA');
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field.up('panel').down('#citeseqBarcodeSeries').setValue(field.getValue() ? 'SI-TN' : 'SI-NA');
144-
}
145-
}
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},{
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xtype: 'ldk-simplecombo',
148-
fieldLabel: '10x GEX/TCR Barcode Series',
149-
itemId: 'barcodeSeries',
150-
forceSelection: true,
151-
storeValues: ['SI-GA', 'SI-TT'],
152-
value: 'SI-GA'
153-
},{
154-
xtype: 'ldk-simplecombo',
155-
fieldLabel: '10x Cite-Seq Barcode Series',
156-
itemId: 'citeseqBarcodeSeries',
157-
forceSelection: true,
158-
storeValues: ['SI-NA', 'SI-TN'],
159-
value: 'SI-NA'
140+
// listeners: {
141+
// change: function(field, val){
142+
// field.up('panel').down('#barcodeSeries').setValue(field.getValue() ? 'SI-TT' : 'SI-GA');
143+
// field.up('panel').down('#citeseqBarcodeSeries').setValue(field.getValue() ? 'SI-TN' : 'SI-NA');
144+
// }
145+
// }
160146
},{
161147
xtype: 'ldk-simplelabkeycombo',
162148
fieldLabel: 'Hashing Type',

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