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Fix R syntax
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singlecell/src/org/labkey/singlecell/pipeline/singlecell/SubsetSeurat.java

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -81,7 +81,7 @@ protected List<String> loadChunkFromFile() throws PipelineJobException
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String subsetEscaped = subset.replace("'", "\\\'");
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ret.add("\tif (!is.null(seuratObj)) {");
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ret.add("\tprint(paste0('Subsetting dataset: ', datasetId, ' with the expression: '" + subsetEscaped + "'))");
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ret.add("\tprint(paste0('Subsetting dataset: ', datasetId, ' with the expression: " + subsetEscaped + "'))");
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ret.add("\t\tcells <- c()");
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ret.add("\t\ttryCatch({");
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ret.add("\t\t\tcells <- WhichCells(seuratObj, expression = " + subset + ")");

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