Support additional file extensions

bbimber · bbimber · commit e8a6b505c02a · 2023-02-24T09:41:05.000-08:00
diff --git a/SequenceAnalysis/src/org/labkey/sequenceanalysis/util/SequenceOutputFileType.java b/SequenceAnalysis/src/org/labkey/sequenceanalysis/util/SequenceOutputFileType.java
@@ -11,6 +11,6 @@ public class SequenceOutputFileType extends FileType
 {
     public SequenceOutputFileType()
     {
-        super(Arrays.asList(".bam", ".gff", ".gtf", ".bed", ".vcf", ".rds"), ".bed", FileType.gzSupportLevel.SUPPORT_GZ);
+        super(Arrays.asList(".bam", ".cram", ".gff", ".gtf", ".bed", ".vcf", ".rds", ".bw"), ".bed", FileType.gzSupportLevel.SUPPORT_GZ);
     }
 }

Original file line number	Diff line number	Diff line change
`@@ -11,6 +11,6 @@ public class SequenceOutputFileType extends FileType`
`11`	`11`	`{`
`12`	`12`	`public SequenceOutputFileType()`
`13`	`13`	`{`
`14`		`- super(Arrays.asList(".bam", ".gff", ".gtf", ".bed", ".vcf", ".rds"), ".bed", FileType.gzSupportLevel.SUPPORT_GZ);`
	`14`	`+ super(Arrays.asList(".bam", ".cram", ".gff", ".gtf", ".bed", ".vcf", ".rds", ".bw"), ".bed", FileType.gzSupportLevel.SUPPORT_GZ);`
`15`	`15`	`}`
`16`	`16`	`}`