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Bugfix to celltypist and columnPrefix
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singlecell/src/org/labkey/singlecell/pipeline/singlecell/RunCelltypistCustomModel.java

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -7,6 +7,7 @@
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import org.labkey.api.sequenceanalysis.pipeline.PipelineContext;
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import org.labkey.api.sequenceanalysis.pipeline.SequenceOutputHandler;
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import org.labkey.api.sequenceanalysis.pipeline.ToolParameterDescriptor;
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import org.labkey.api.singlecell.pipeline.SeuratToolParameter;
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import org.labkey.api.singlecell.pipeline.SingleCellStep;
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import org.labkey.api.util.PageFlowUtil;
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@@ -32,7 +33,7 @@ public Provider()
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put("category", TrainCelltypist.CATEGORY);
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put("performGenomeFilter", false);
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}}, null),
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ToolParameterDescriptor.create("columnPrefix", "Column Prefix", "This string will be pre-pended to the normal output columns (i.e. majority_voting and predicted_labels)", "textfield", null, null)
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SeuratToolParameter.create("columnPrefix", "Column Prefix", "This string will be pre-pended to the normal output columns (i.e. majority_voting and predicted_labels)", "textfield", null, null)
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), PageFlowUtil.set("sequenceanalysis/field/SequenceOutputFileSelectorField.js"), null);
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}
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