Append to log when logging slurm memory

bbimber · bbimber · commit d01899d71b84 · 2024-12-01T16:15:07.000-08:00
diff --git a/cluster/src/org/labkey/cluster/pipeline/SlurmExecutionEngine.java b/cluster/src/org/labkey/cluster/pipeline/SlurmExecutionEngine.java
@@ -27,6 +27,7 @@
 import java.io.FileWriter;
 import java.io.IOException;
 import java.io.PrintWriter;
+import java.nio.file.StandardOpenOption;
 import java.util.ArrayList;
 import java.util.Arrays;
 import java.util.HashMap;
@@ -319,7 +320,7 @@ else if (headerFound)
                                         PipelineStatusFile sf = PipelineService.get().getStatusFile(job.getJobId());
                                         if (sf != null)
                                         {
-                                            try (PrintWriter writer = PrintWriters.getPrintWriter(new File(sf.getFilePath())))
+                                            try (PrintWriter writer = PrintWriters.getPrintWriter(new File(sf.getFilePath()), StandardOpenOption.APPEND))
                                             {
                                                 writer.println(info + ". Raw slurm value: " + maxRSS);
                                             }

Original file line number	Diff line number	Diff line change
`@@ -27,6 +27,7 @@`
`27`	`27`	`import java.io.FileWriter;`
`28`	`28`	`import java.io.IOException;`
`29`	`29`	`import java.io.PrintWriter;`
	`30`	`+import java.nio.file.StandardOpenOption;`
`30`	`31`	`import java.util.ArrayList;`
`31`	`32`	`import java.util.Arrays;`
`32`	`33`	`import java.util.HashMap;`
`@@ -319,7 +320,7 @@ else if (headerFound)`
`319`	`320`	`PipelineStatusFile sf = PipelineService.get().getStatusFile(job.getJobId());`
`320`	`321`	`if (sf != null)`
`321`	`322`	`{`
`322`		`- try (PrintWriter writer = PrintWriters.getPrintWriter(new File(sf.getFilePath())))`
	`323`	`+ try (PrintWriter writer = PrintWriters.getPrintWriter(new File(sf.getFilePath()), StandardOpenOption.APPEND))`
`323`	`324`	`{`
`324`	`325`	`writer.println(info + ". Raw slurm value: " + maxRSS);`
`325`	`326`	`}`