Bugfix to AppendNimble

bbimber · bbimber · commit b795083db8d9 · 2025-01-23T20:42:35.000-08:00
diff --git a/singlecell/src/org/labkey/singlecell/pipeline/singlecell/AppendNimble.java b/singlecell/src/org/labkey/singlecell/pipeline/singlecell/AppendNimble.java
@@ -79,7 +79,7 @@ protected Chunk createParamChunk(SequenceOutputHandler.JobContext ctx, List<Seur
             JSONArray arr = json.getJSONArray(i);
             if (arr.length() != 4)
             {
-                throw new PipelineJobException("Unexpected value: " + json.getString(i));
+                throw new PipelineJobException("Unexpected value: " + json.get(i));
             }
 
             int genomeId = arr.getInt(0);

Original file line number	Diff line number	Diff line change
`@@ -79,7 +79,7 @@ protected Chunk createParamChunk(SequenceOutputHandler.JobContext ctx, List<Seur`
`79`	`79`	`JSONArray arr = json.getJSONArray(i);`
`80`	`80`	`if (arr.length() != 4)`
`81`	`81`	`{`
`82`		`- throw new PipelineJobException("Unexpected value: " + json.getString(i));`
	`82`	`+ throw new PipelineJobException("Unexpected value: " + json.get(i));`
`83`	`83`	`}`
`84`	`84`
`85`	`85`	`int genomeId = arr.getInt(0);`