Always delete the '.done' file, so hashing will repeat after restart

Author: bbimber

singlecell/src/org/labkey/singlecell/CellHashingServiceImpl.java

@@ -1358,6 +1358,13 @@ public void copyHtmlLocally(SequenceOutputHandler.JobContext ctx) throws Pipelin
 
                     Files.copy(f.toPath(), target.toPath());
                 }
+
+                // Also delete the .done files, so hashing will repeat if we change params:
+                if (f.getName().endsWith(CellHashingServiceImpl.CALL_EXTENSION + ".done"))
+                {
+                    ctx.getLogger().debug("Removing hashing .done file: " + f.getName());
+                    f.delete();
+                }
             }
         }
         catch (IOException e)

singlecell/src/org/labkey/singlecell/pipeline/singlecell/RunCellHashing.java

@@ -74,16 +74,6 @@ public String getDockerContainerName()
     protected void onFailure(SequenceOutputHandler.JobContext ctx, String outputPrefix) throws PipelineJobException
     {
         CellHashingService.get().copyHtmlLocally(ctx);
-
-        // Also delete the .done files, so hashing will repeat if we change params:
-        for (File f : ctx.getOutputDir().listFiles())
-        {
-            if (f.getName().endsWith(CellHashingServiceImpl.CALL_EXTENSION + ".done"))
-            {
-                ctx.getLogger().debug("Removing hashing .done file: " + f.getName());
-                f.delete();
-            }
-        }
     }
 
     @Override