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Migrate .view.xml files from deprecated <permissions> elements to <permissionClasses> (#298)
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10 files changed

+30
-31
lines changed

10 files changed

+30
-31
lines changed

‎OpenLdapSync/resources/views/ldapSettings.view.xml‎

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
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<view xmlns="http://labkey.org/data/xml/view" title="LDAP Sync Settings">
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<permissions>
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<permission name="admin"/>
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</permissions>
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<permissionClasses>
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<permissionClass name="org.labkey.api.security.permissions.AdminPermission"/>
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</permissionClasses>
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<dependencies>
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<dependency path="clientapi"/>
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<dependency path="clientapi_core"/>

‎SequenceAnalysis/resources/views/importFasta.view.xml‎

Lines changed: 3 additions & 3 deletions
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@@ -1,7 +1,7 @@
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<view xmlns="http://labkey.org/data/xml/view" title="Import Sequence Data">
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<permissions>
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<permission name="insert"/>
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</permissions>
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<permissionClasses>
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<permissionClass name="org.labkey.api.security.permissions.InsertPermission"/>
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</permissionClasses>
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<dependencies>
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<dependency path="laboratory.context"/>
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<dependency path="SequenceAnalysis/sequenceAnalysis"/>

‎SequenceAnalysis/resources/views/importTracks.view.xml‎

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Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
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<view xmlns="http://labkey.org/data/xml/view" title="Import Tracks">
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<permissions>
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<permission name="insert"/>
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</permissions>
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<permissionClasses>
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<permissionClass name="org.labkey.api.security.permissions.InsertPermission"/>
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</permissionClasses>
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<dependencies>
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<dependency path="laboratory.context"/>
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<dependency path="SequenceAnalysis/sequenceAnalysis"/>

‎SequenceAnalysis/resources/views/sequenceDefaults.view.xml‎

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
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<view xmlns="http://labkey.org/data/xml/view" title="DISCVR-Seq Settings">
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<permissions>
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<permission name="admin"/>
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</permissions>
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<permissionClasses>
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<permissionClass name="org.labkey.api.security.permissions.AdminPermission"/>
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</permissionClasses>
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<dependencies>
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<dependency path="laboratory.context"/>
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<dependency path="SequenceAnalysis/sequenceAnalysis"/>

‎SequenceAnalysis/resources/views/siteAdmin.view.xml‎

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
11
<view xmlns="http://labkey.org/data/xml/view" title="DISCVR-Seq Site Settings">
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<permissions>
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<permission name="admin"/>
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</permissions>
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<permissionClasses>
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<permissionClass name="org.labkey.api.security.permissions.AdminPermission"/>
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</permissionClasses>
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<dependencies>
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<dependency path="laboratory.context"/>
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<dependency path="SequenceAnalysis/sequenceAnalysis"/>

‎blast/resources/views/settings.view.xml‎

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
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<view xmlns="http://labkey.org/data/xml/view" title="BLAST Settings">
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<permissions>
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<permission name="admin"/>
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</permissions>
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<permissionClasses>
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<permissionClass name="org.labkey.api.security.permissions.AdminPermission"/>
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</permissionClasses>
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<dependencies>
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<dependency path="laboratory.context" />
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</dependencies>

‎jbrowse/resources/views/databaseDetails.view.xml‎

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
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<view xmlns="http://labkey.org/data/xml/view" title="JBrowse Session" frame="none">
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<permissions>
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<permission name="admin"/>
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</permissions>
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<permissionClasses>
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<permissionClass name="org.labkey.api.security.permissions.AdminPermission"/>
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</permissionClasses>
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<dependencies>
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<dependency path="laboratory.context" />
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</dependencies>

‎jbrowse/resources/views/genotypeTable.view.xml‎

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
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<view xmlns="http://labkey.org/data/xml/view" title="Genotypes">
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<permissions>
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<permission name="read"/>
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</permissions>
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<permissionClasses>
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<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
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</permissionClasses>
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<dependencies>
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<dependency path="laboratory.context" />
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<dependency path="internal/jQuery"/>

‎jbrowse/resources/views/jbrowseSearch.view.xml‎

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
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<view xmlns="http://labkey.org/data/xml/view" title="JBrowse Search">
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<permissions>
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<permission name="read"/>
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</permissions>
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<permissionClasses>
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<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
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</permissionClasses>
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<dependencies>
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<dependency path="gen/jbrowse2SearchWebpart.lib.xml"/>
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<dependency path="LDK.context"/>

‎jbrowse/src/client/entryPoints.js‎

Lines changed: 3 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -7,24 +7,23 @@ module.exports = {
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apps: [{
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name: 'jbrowseBrowser',
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title: 'JBrowse Genome Browser',
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permission: 'read',
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permissionClasses: ['org.labkey.api.security.permissions.ReadPermission'],
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path: './src/client/JBrowse/Browser'
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},{
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name: 'jbrowse2SearchWebpart',
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title: 'JBrowse Search',
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permission: 'read',
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template: 'app',
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generateLib: true,
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path: './src/client/JBrowse/Search/webpart'
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},{
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name: 'variantSearch',
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title: 'Variant Search',
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permission: 'read',
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permissionClasses: ['org.labkey.api.security.permissions.ReadPermission'],
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path: './src/client/JBrowse/VariantSearch'
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},{
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name: 'variantTable',
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title: 'Variant Table',
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permission: 'read',
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permissionClasses: ['org.labkey.api.security.permissions.ReadPermission'],
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path: './src/client/JBrowse/VariantTable'
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}]
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};

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