No need to set HOME_DIR in docker

Author: bbimber

singlecell/api-src/org/labkey/api/singlecell/pipeline/AbstractSingleCellPipelineStep.java

@@ -284,7 +284,7 @@ public static void executeR(SequenceOutputHandler.JobContext ctx, String dockerC
             writer.println("\tRscript --vanilla " + localRScript.getName());
             writer.println("");
             writer.println("echo 'Bash script complete'");
-
+            writer.println("");
         }
         catch (IOException e)
         {

singlecell/src/org/labkey/singlecell/CellHashingServiceImpl.java

@@ -1275,7 +1275,7 @@ private File generateCellHashingCalls(File citeSeqCountOutDir, File outputDir, S
             writer.println("\t-u $UID \\");
             writer.println("\t-e USERID=$UID \\");
             writer.println("\t-w /work \\");
-            writer.println("\t-e HOME=/homeDir \\");
+            //writer.println("\t-e HOME=/homeDir \\");
             writer.println("\tghcr.io/bimberlab/cellhashr:latest \\");
             writer.println("\tRscript --vanilla " + localRScript.getName());
         }