Fix test

Author: bbimber

SequenceAnalysis/src/org/labkey/sequenceanalysis/run/preprocessing/FilterReadsStep.java

@@ -95,7 +95,7 @@ public static class GenomeParam extends ToolParameterDescriptor implements ToolP
     {
         public GenomeParam()
         {
-            super(null, GENOME, "Choose Genome", "Select a previously saved reference genome from the list.", "ldk-simplelabkeycombo", new JSONObject()
+            super(null, GENOME, "Choose Genome", "Select a previously saved reference genome from the list.", "ldk-simplelabkeycombo", null, new JSONObject()
             {{
                 put("width", 450);
                 put("schemaName", "sequenceanalysis");
@@ -105,7 +105,7 @@ public GenomeParam()
                 put("displayField", "name");
                 put("valueField", "rowid");
                 put("allowBlank", false);
-            }}, null);
+            }});
         }
 
         @Override

SequenceAnalysis/test/src/org/labkey/test/tests/external/labModules/SequenceTest.java

@@ -671,7 +671,7 @@ private void analysisPanelTest() throws Exception
         assertEquals(invalidJSONError, analysisDescription, params.get("jobDescription"));
         assertEquals(invalidJSONError, jobName, params.get("jobName"));
 
-        assertEquals(invalidJSONError, "IlluminaAdapterTrimming;AdapterTrimming;AvgQualFilter;CropReads;FASTQC;DownsampleReads;PrintReadsContaining;LeadingTrim;Flash;MaxInfoTrim;SlidingWindowTrim;ReadCropping;ReadLengthFilter;TrailingTrim", params.get("fastqProcessing"));
+        assertEquals(invalidJSONError, "IlluminaAdapterTrimming;AdapterTrimming;AvgQualFilter;CropReads;FASTQC;DownsampleReads;PrintReadsContaining;FilterMatchingReads;LeadingTrim;Flash;MaxInfoTrim;SlidingWindowTrim;ReadCropping;ReadLengthFilter;TrailingTrim", params.get("fastqProcessing"));
         assertEquals(invalidJSONError, overlapLength.toString(), params.get("fastqProcessing.AdapterTrimming.overlapLength").toString());
         assertEquals(invalidJSONError, errorRate.toString(), params.get("fastqProcessing.AdapterTrimming.errorRate").toString());
         assertEquals(invalidJSONError, minReadLength, params.get("fastqProcessing.AdapterTrimming.minLength").toString());