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Dont set tmpdir for DeepVariant/docker
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SequenceAnalysis/src/org/labkey/sequenceanalysis/run/analysis/DeepVariantAnalysis.java

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@@ -248,7 +248,6 @@ public void execute(File inputBam, File refFasta, File outputGvcf, PipelineOutpu
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writer.println("\t-v \"${WD}:/work\" \\");
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writer.println("\t-v \"${HOME}:/homeDir\" \\");
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writer.println("\t-u $UID \\");
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writer.println("\t-e TMPDIR=/work/tmpDir \\");
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writer.println("\t-e USERID=$UID \\");
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writer.println("\t--entrypoint /bin/bash \\");
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writer.println("\t-w /work \\");

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