Set scripts executable

bbimber · bbimber · commit 97a71bb35092 · 2024-12-03T20:09:35.000-08:00
diff --git a/SequenceAnalysis/api-src/org/labkey/api/sequenceanalysis/run/DockerWrapper.java b/SequenceAnalysis/api-src/org/labkey/api/sequenceanalysis/run/DockerWrapper.java
@@ -166,6 +166,8 @@ public void executeWithDocker(List<String> containerArgs, File workDir, Pipeline
             throw new PipelineJobException(e);
         }
 
+        localBashScript.setExecutable(true);
+        dockerBashScript.setExecutable(true);
         execute(Arrays.asList("/bin/bash", localBashScript.getPath()));
     }
 

Original file line number	Diff line number	Diff line change
`@@ -166,6 +166,8 @@ public void executeWithDocker(List<String> containerArgs, File workDir, Pipeline`
`166`	`166`	`throw new PipelineJobException(e);`
`167`	`167`	`}`
`168`	`168`
	`169`	`+ localBashScript.setExecutable(true);`
	`170`	`+ dockerBashScript.setExecutable(true);`
`169`	`171`	`execute(Arrays.asList("/bin/bash", localBashScript.getPath()));`
`170`	`172`	`}`
`171`	`173`