Revert earlier change to ADT case

bbimber · bbimber · commit 96c9dbf56679 · 2022-03-06T13:15:19.000-08:00
diff --git a/singlecell/resources/chunks/CiteSeqPlots.R b/singlecell/resources/chunks/CiteSeqPlots.R
@@ -6,7 +6,7 @@ for (datasetId in names(seuratObjects)) {
         print('ADT assay not present, skipping')
     } else {
         for (adt in rownames(seuratObj[['ADT']])) {
-            CellMembrane::FeaturePlotAcrossReductions(seuratObj, features = paste0('ADT_', adt))
+            CellMembrane::FeaturePlotAcrossReductions(seuratObj, features = paste0('adt_', adt))
         }
     }
 

Original file line number	Diff line number	Diff line change
`@@ -6,7 +6,7 @@ for (datasetId in names(seuratObjects)) {`
`6`	`6`	`print('ADT assay not present, skipping')`
`7`	`7`	`} else {`
`8`	`8`	`for (adt in rownames(seuratObj[['ADT']])) {`
`9`		`- CellMembrane::FeaturePlotAcrossReductions(seuratObj, features = paste0('ADT_', adt))`
	`9`	`+ CellMembrane::FeaturePlotAcrossReductions(seuratObj, features = paste0('adt_', adt))`
`10`	`10`	`}`
`11`	`11`	`}`
`12`	`12`