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Allow bigwig files as genome tracks
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SequenceAnalysis/src/org/labkey/sequenceanalysis/pipeline/ImportGenomeTrackPipelineJob.java

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@@ -111,6 +111,7 @@ public boolean accept(File file)
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SequenceUtil.FILETYPE.gtf.getFileType().isType(file) ||
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SequenceUtil.FILETYPE.gff.getFileType().isType(file) ||
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SequenceUtil.FILETYPE.bed.getFileType().isType(file) ||
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SequenceUtil.FILETYPE.bw.getFileType().isType(file) ||
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SequenceUtil.FILETYPE.vcf.getFileType().isType(file)
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);
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}

SequenceAnalysis/src/org/labkey/sequenceanalysis/util/SequenceUtil.java

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@@ -89,6 +89,7 @@ public static enum FILETYPE
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gff(Arrays.asList(".gff", ".gff3"), true),
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gbk(".gbk"),
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bed(Collections.singletonList(".bed"), true),
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bw(Collections.singletonList(".bw"), false),
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vcf(Arrays.asList(".vcf"), true),
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gvcf(Arrays.asList(".g.vcf"), true);
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