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Resolve cutadapt exe in PATH
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SequenceAnalysis/src/org/labkey/sequenceanalysis/run/preprocessing/CutadaptWrapper.java

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -311,6 +311,6 @@ private void trimPE(Pair<File, File> inputs, Pair<File, File> outputs, List<Stri
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public File getExe()
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{
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return SequencePipelineService.get().getExeForPackage("CUTADAPTPATH", "cutadapt");
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return resolveFileInPath("cutadapt", "CUTADAPTPATH", false);
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}
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}

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