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for CITE-seq, switch to use proper assay key when plotting
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singlecell/resources/chunks/CiteSeqPlots.R

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -7,7 +7,7 @@ for (datasetId in names(seuratObjects)) {
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} else {
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for (feat in rownames(seuratObj[[assayName]])) {
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tryCatch({
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CellMembrane::FeaturePlotAcrossReductions(seuratObj, features = paste0(tolower(assayName), '_', feat))
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CellMembrane::FeaturePlotAcrossReductions(seuratObj, features = paste0(seuratObj@assays[[assayName]]@key, feat))
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}, error = function(e){
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warning(conditionMessage(e))
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traceback()

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