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Update FindMarkers defaults
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singlecell/src/org/labkey/singlecell/pipeline/singlecell/FindMarkers.java

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -34,7 +34,7 @@ public Provider()
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put("multiSelect", true);
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put("allowBlank", false);
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put("storeValues", "wilcox;bimod;roc;t;negbinom;poisson;LR;MAST;DESeq2");
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put("initialValues", "wilcox;MAST;DESeq2");
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put("initialValues", "wilcox;MAST");
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put("delimiter", ";");
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put("joinReturnValue", true);
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}}, null, null, false, true),
@@ -44,7 +44,7 @@ public Provider()
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}}, 0.001),
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SeuratToolParameter.create("foldChangeThreshold", "Log2 Fold-Change Threshold", "Only genes with log2-foldchange above this will be reported", "ldk-numberfield", new JSONObject(){{
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put("minValue", 0);
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}}, 0.5)
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}}, 0.25)
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), Arrays.asList("/sequenceanalysis/field/TrimmingTextArea.js"), null);
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}
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