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Drop unused bissnp code
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SequenceAnalysis/pipeline_code/sequence_tools_install.sh

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@@ -335,30 +335,6 @@ else
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fi
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#
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# BisSNP
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#
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echo ""
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echo ""
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echo "%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%"
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echo "Install BisSNP"
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echo ""
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cd $LKSRC_DIR
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if [[ ! -e ${LKTOOLS_DIR}/BisSNP.jar || ! -z $FORCE_REINSTALL ]];
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then
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echo "Cleaning up previous installs"
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rm -Rf BisSNP*
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rm -Rf $LKTOOLS_DIR/BisSNP.jar
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wget $WGET_OPTS https://downloads.sourceforge.net/project/bissnp/BisSNP-0.82.2/BisSNP-0.82.2.jar
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install ./BisSNP-0.82.2.jar $LKTOOLS_DIR/BisSNP.jar
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else
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echo "Already installed"
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fi
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#
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#mosaik
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#

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