Merge discvr-22.11 to develop

Author: bbimber

mcc/package-lock.json

@@ -0,0 +1,26 @@
+value	title	category	description	sort_order	date_disabled
+Spontaneous Death				1	
+Sudden Infant Death				5	
+Accidental Death				13	
+Death Due to Fight				14	
+Acute Surgical Death				6	
+Postoperative Death				7	
+Dead On Arrival				15	
+Unplanned Experimental Death				8	
+Perinatal Death				2	
+Postpartum Death				9	
+Death in Quarantine				12	
+Undetermined Cause				10	
+Unclassified Cause				11	
+Abortion ( < 130 days gestation )				17	
+Spontaneous Death, Experimental subject				22	
+Neonatal death (<28 days of age, breathed once)				28	
+Spontaneous Death in quarantine				24	
+Stillbirth ( > 130 days gestation, never breathed)				16	
+Cause of Death Unknown				99	
+EUTHANASIA, EXPERIMENTAL				3	
+EUTHANASIA, NONEXPERIMENTAL				4	
+EUTHANASIA, QUARANTINE				3	
+Medical Termination				30	
+Miscarriage				32	
+Biochemical Pregnancy				35	

mcc/resources/data/death_cause.tsv

@@ -37,13 +37,13 @@
         <dataset name="transfers" id="1001" category="Colony Management" type="Standard">
             <tags/>
         </dataset>
-        <dataset name="deaths" id="1048" showByDefault="false" category="Colony Management" demographicData="true" type="Standard">
+        <dataset name="deaths" id="1048" showByDefault="true" category="Colony Management" demographicData="true" type="Standard">
             <tags/>
         </dataset>
         <dataset name="demographics" id="1012" category="Colony Management" demographicData="true" type="Standard">
             <tags/>
         </dataset>
-        <dataset name="departure" id="1013" showByDefault="false" category="Colony Management" type="Standard">
+        <dataset name="departure" id="1013" showByDefault="true" category="Colony Management" type="Standard">
             <tags/>
         </dataset>
         <dataset name="assignment" id="1002" category="Colony Management" type="Standard">

mcc/resources/referenceStudy/study/datasets/datasets_manifest.xml

@@ -178,6 +178,13 @@
             schemaName: 'ehr_lookups',
             queryName: 'conc_units',
             pk: 'rowid'
+        },{
+            label: 'Death Cause',
+            populateFn: 'populateFromFile',
+            moduleName: 'mcc',
+            schemaName: 'ehr_lookups',
+            queryName: 'death_cause',
+            pk: 'rowid'
         },{
             label: 'Dosage Units',
             populateFn: 'populateFromFile',