Bugfix to mGAP ETL

bbimber · bbimber · commit 68677f349836 · 2025-05-04T12:40:24.000-07:00
diff --git a/mGAP/src/org/labkey/mgap/columnTransforms/JBrowseSessionTransform.java b/mGAP/src/org/labkey/mgap/columnTransforms/JBrowseSessionTransform.java
@@ -190,9 +190,9 @@ private void ensureLuceneData(String objectId)
             return;
         }
 
-        try (Results rs = ts1.getResults())
+        try
         {
-            String containerId = rs.getString(FieldKey.fromString("container"));
+            String containerId = ts1.getObject(String.class);
 
             Map<String, Object> row = new CaseInsensitiveHashMap<>();
             row.put("objectid", objectId);

Original file line number	Diff line number	Diff line change
`@@ -190,9 +190,9 @@ private void ensureLuceneData(String objectId)`
`190`	`190`	`return;`
`191`	`191`	`}`
`192`	`192`
`193`		`- try (Results rs = ts1.getResults())`
	`193`	`+ try`
`194`	`194`	`{`
`195`		`- String containerId = rs.getString(FieldKey.fromString("container"));`
	`195`	`+ String containerId = ts1.getObject(String.class);`
`196`	`196`
`197`	`197`	`Map<String, Object> row = new CaseInsensitiveHashMap<>();`
`198`	`198`	`row.put("objectid", objectId);`