Reduce length of description field

bbimber · bbimber · commit 097c254a4bb3 · 2024-05-10T06:25:34.000-07:00
diff --git a/mGAP/src/org/labkey/mgap/pipeline/IndexVariantsForMgapStep.java b/mGAP/src/org/labkey/mgap/pipeline/IndexVariantsForMgapStep.java
@@ -101,7 +101,7 @@ public Output processVariants(File inputVCF, File outputDirectory, ReferenceGeno
             throw new PipelineJobException("Unable to find file: " + idx.getPath());
         }
 
-        output.addSequenceOutput(idx, "mGAP Lucene Index: " + releaseVersion, CATEGORY, null, null, genome.getGenomeId(), "Fields indexed: " + infoFieldsRaw);
+        output.addSequenceOutput(idx, "mGAP Lucene Index: " + releaseVersion, CATEGORY, null, null, genome.getGenomeId(), "Fields indexed: " + infoFields.size());
 
         return output;
     }

Original file line number	Diff line number	Diff line change
`@@ -101,7 +101,7 @@ public Output processVariants(File inputVCF, File outputDirectory, ReferenceGeno`
`101`	`101`	`throw new PipelineJobException("Unable to find file: " + idx.getPath());`
`102`	`102`	`}`
`103`	`103`
`104`		`- output.addSequenceOutput(idx, "mGAP Lucene Index: " + releaseVersion, CATEGORY, null, null, genome.getGenomeId(), "Fields indexed: " + infoFieldsRaw);`
	`104`	`+ output.addSequenceOutput(idx, "mGAP Lucene Index: " + releaseVersion, CATEGORY, null, null, genome.getGenomeId(), "Fields indexed: " + infoFields.size());`
`105`	`105`
`106`	`106`	`return output;`
`107`	`107`	`}`