diff --git a/analysis/ann_groups_to_bq_table.py b/analysis/ann_groups_to_bq_table.py new file mode 100644 index 0000000..eb63bdf --- /dev/null +++ b/analysis/ann_groups_to_bq_table.py @@ -0,0 +1,152 @@ +""" +Script to query IDC for ANN objects referencing pathology whole-slide images, +download and parse them in parallel, extract annotation group info, and write results to BigQuery. + +Authentication: +This script uses Google Application Default Credentials (ADC). The recommended way to authenticate is to run: + gcloud auth application-default login +in your terminal before running this script. Ensure your account has access to BigQuery and Cloud Storage resources. +""" +import concurrent.futures +from typing import List, Dict +from google.cloud import bigquery +from google.cloud import storage +from google.api_core.exceptions import NotFound +import highdicom as hd + +# CONFIGURATION +PROJECT_ID = 'idc-pathomics-000' +QUERY_TO_IDC = ''' +SELECT + dcm_all.SOPInstanceUID, + dcm_all.SeriesInstanceUID, + dcm_all.gcs_url +FROM + `bigquery-public-data.idc_current.dicom_all` AS dcm_all +WHERE Modality = 'ANN' +''' +MAX_WORKERS = 8 +BQ_DATASET = 'idc_pathology' +BQ_TABLE = 'annotation_groups' +BQ_TABLE_SCHEMA = [ + bigquery.SchemaField('SOPInstanceUID', 'STRING'), + bigquery.SchemaField('SeriesInstanceUID', 'STRING'), + bigquery.SchemaField('annotated_property_category', 'RECORD', fields=[ + bigquery.SchemaField('CodeValue', 'STRING'), + bigquery.SchemaField('CodeMeaning', 'STRING'), + bigquery.SchemaField('CodingSchemeDesignator', 'STRING'), + ]), + bigquery.SchemaField('annotated_property_type', 'RECORD', fields=[ + bigquery.SchemaField('CodeValue', 'STRING'), + bigquery.SchemaField('CodeMeaning', 'STRING'), + bigquery.SchemaField('CodingSchemeDesignator', 'STRING'), + ]), + bigquery.SchemaField('num_annotations', 'INTEGER'), + bigquery.SchemaField('annotated_SeriesInstanceUID', 'STRING'), +] + + +def query_ann_files(client: bigquery.Client) -> List[Dict]: + query_job = client.query(QUERY_TO_IDC) + return [dict(row) for row in query_job] + + +def process_ann_files(rows: List[Dict]) -> List[Dict]: + storage_client = storage.Client(project=PROJECT_ID) + results = [] + with concurrent.futures.ThreadPoolExecutor(max_workers=MAX_WORKERS) as executor: + future_to_row = { + executor.submit( + parse_ann_blob, + storage_client, + row['gcs_url'], + row['SOPInstanceUID'], + row['SeriesInstanceUID'] + ): row for row in rows + } + for future in concurrent.futures.as_completed(future_to_row): + row = future_to_row[future] + try: + ann_results = future.result() + results.extend(ann_results) + except Exception as e: + print(f'Error processing {row["gcs_url"]}: {e}') + return results + + +def parse_ann_blob(storage_client: storage.Client, gcs_url: str, sop_instance_uid: str,series_instance_uid: str) -> List[Dict]: + # Parse bucket and blob name from GCS URL + parts = gcs_url[5:].split('/', 1) + bucket_name, blob_name = parts[0], parts[1] + bucket = storage_client.bucket(bucket_name) + blob = bucket.blob(blob_name) + results = [] + with blob.open('rb') as file_obj: + ann = hd.ann.annread(file_obj) + for ann_group in ann.get_annotation_groups(): + results.append({ + 'SOPInstanceUID': sop_instance_uid, + 'SeriesInstanceUID': series_instance_uid, + 'annotated_property_category': coded_concept_to_dict(ann_group.annotated_property_category), + 'annotated_property_type': coded_concept_to_dict(ann_group.annotated_property_type), + 'num_annotations': ann_group.number_of_annotations, + 'annotated_SeriesInstanceUID': ann.ReferencedSeriesSequence[0].SeriesInstanceUID + }) + return results + + +def coded_concept_to_dict(cc): + return { + 'CodeValue': cc.value, + 'CodeMeaning': cc.meaning, + 'CodingSchemeDesignator': cc.scheme_designator + } if cc is not None else None + + +def main(): + bq_client = bigquery.Client(project=PROJECT_ID) + # Query ANN files + rows = query_ann_files(bq_client) + print(f'Found {len(rows)} ANN files to process.') + # Process ANN files in parallel + results = process_ann_files(rows) + print(f'Extracted annotation group info from {len(results)} groups.') + # Write to BigQuery + if results: + table_ref = bq_client.dataset(BQ_DATASET).table(BQ_TABLE) + # Always delete and recreate the table before inserting + try: + bq_client.delete_table(table_ref, not_found_ok=True) + print(f'Table {BQ_TABLE} deleted.') + except Exception as e: + print(f'Error deleting table: {e}') + table = bigquery.Table(table_ref, schema=BQ_TABLE_SCHEMA) + bq_client.create_table(table) + print(f'Table {BQ_TABLE} created.') + # Retry loop to ensure table is available before inserting + import time + found = False + for _ in range(10): + try: + bq_client.get_table(table_ref) + found = True + break + except NotFound: + time.sleep(2) + if not found: + print(f'Error: Table {BQ_TABLE} not found after creation. Saving results locally as ann_groups_results.json.') + import json + with open('ann_groups_results.json', 'w') as f: + json.dump(results, f, indent=2) + return + errors = bq_client.insert_rows_json(table_ref, results) + if errors: + print(f'BigQuery insert errors: {errors}') + else: + print('Results written to BigQuery.') + else: + print('No results to write.') + + +if __name__ == '__main__': + main() diff --git a/notebooks/collections_demos/bmdeep_annotations_example.png b/notebooks/collections_demos/bmdeep_annotations_example.png new file mode 100644 index 0000000..6c21526 Binary files /dev/null and b/notebooks/collections_demos/bmdeep_annotations_example.png differ diff --git a/notebooks/collections_demos/bonemarrowwsi_pediatricleukemia.ipynb b/notebooks/collections_demos/bonemarrowwsi_pediatricleukemia.ipynb new file mode 100644 index 0000000..7ade411 --- /dev/null +++ b/notebooks/collections_demos/bonemarrowwsi_pediatricleukemia.ipynb @@ -0,0 +1,11690 @@ +{ + "cells": [ + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "\"Open" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "vBC86EhVsKql" + }, + "source": [ + "# Where cells come from: exploring bone marrow with the `BoneMarrowWSI-PediatricLeukemia` collection\n" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "This tutorial is shared as part of the tutorials prepared by the Imaging Data Commons team and available at https://github.com/ImagingDataCommons/IDC-Tutorials/blob/master/notebooks.\n", + "\n", + "If you are new to IDC and DICOM for digital pathology applications, you may want to check out other introductory tutorials on this topic available here: https://github.com/ImagingDataCommons/IDC-Tutorials/tree/master/notebooks/pathomics.\n", + "\n", + "This tutorial is aimed for the users of Imaging Data Commons that are interested in **bone marrow smear analysis**. You will learn how to:\n", + "* select and access images and annotations of the comprehensive bone marrow collection `BoneMarrowWSI-PediatricLeukemia`\n", + "* parse and understand the available annotations stored in DICOM Bulk Simple Annotations (ANN) format\n", + "\n", + "To learn more about the IDC, please visit the [IDC user guide](https://learn.canceridc.dev).\n", + "\n", + "If you have any questions, bug reports, or feature requests please feel free to contact us at the [IDC discussion forum](https://discourse.canceridc.dev)!\n", + "\n", + "----------------------\n", + "\n", + "Initial version: Feb 2026 \n", + "Updated: Feb 2026" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "jbLfOJ2OsRHU" + }, + "source": [ + "## Background\n", + "\n", + "The analysis of bone marrow aspirate smears serves as the foundation for assessing haematopoiesis (the process of blood cell formation in the bone marrow) and amongst other systemic diseses, the diagnosis of leukemia. This notebook introduces the `BoneMarrowWSI-PediatricLeukemia` collection, a commprehensive dataset of bone marrow smears and cell annotations. The dataset is presented in detail in [this preprint](https://www.arxiv.org/pdf/2509.15895) and is publicly available via the [Imaging Data Commons](https://portal.imaging.datacommons.cancer.gov/). \n", + "\n", + "- **Images**: The `BoneMarrowWSI-PediatricLeukemia` dataset comprises bone marrow aspirate smear WSIs for almost 250 pediatric cases of leukemia, including acute lymphoid leukemia (ALL), acute myeloid leukemia (AML), and chronic myeloid leukemia (CML). The smears were prepared for the initial diagnosis (i.e., without prior treatment), stained in accordance with the Pappenheim method, and scanned at 40x magnification.\n", + "- **Annotations**: The images have been annotated with rectangular regions of interest (ROI) of the evaluable monolayer area and more than 40000 cell bounding box annotations have been placed (with few exceptions) within the ROIs. For a subset of them all cells and other haematological structures have additionally been labelled by multiple experts in a consensus labeling approach with 49 distinct (cell type) classes. The consensus labelling approach worked as follows: each bounding box was successively labelled by different experts in so-called \"annotation sessions\" until (a) the bounding box had been labelled by at least two experts, and (b) the most frequent label had constituted at least half of all labels given to that bounding box (and had then been termed \"consensus class\"). In summary, the following annotations are available: \n", + "\n", + " - For each slide: ROI annotations of the monolayer area for each slide\n", + " - For some slides: Unlabeled cell bounding boxes\n", + " - For some slides: Cell bounding boxes with cell type labels for each annotation session plus the finally obtained consensus.\n", + "\n", + "Both images and annotations are made available in the DICOM format. For the annotations, more specifically, the **DICOM Microscopy Bulk Simple Annotation format (ANN)** was used, which is one of multiple options to store pathology annotation data in DICOM. As a general introduction to this format, we recommend having a look at [this tutorial notebook](https://github.com/ImagingDataCommons/IDC-Tutorials/blob/master/notebooks/pathomics/microscopy_dicom_ann_intro.ipynb).\n", + "This notebook demonstrates **how to access and explore** the `BoneMarrowWSI-PediatricLeukemia` collection with a focus on its extensive annotation data. \n", + "\n", + "\n", + "\"Example\n", + "\n" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "w7A7-5CY8Mmu" + }, + "source": [ + "## Prerequisites\n", + "**Installations**\n", + "* **Install highdicom:** [highdicom](https://highdicom.readthedocs.io/en/latest/introduction.html) was specifically designed to work with DICOM objects holding image-derived information, e.g. annotations and measurements. Detailed information on highdicom's functionality can be found in its [user guide](https://highdicom.readthedocs.io/en/latest/usage.html).\n", + "* **Install wsidicom:** The [wsidicom](https://pypi.org/project/wsidicom/) Python package provides functionality to open and extract image or metadata from WSIs.\n", + "* **Install idc-index:** The Python package [idc-index](https://pypi.org/project/idc-index/) facilitates queries of the basic metadata and download of DICOM files hosted by the IDC." + ] + }, + { + "cell_type": "code", + "execution_count": 1, + "metadata": { + "id": "tacxH-AusHPT" + }, + "outputs": [], + "source": [ + "%%capture\n", + "!pip install highdicom\n", + "!pip install wsidicom\n", + "!pip install idc-index --upgrade" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "ZuAozr8WDtuM" + }, + "source": [ + "## Imports" + ] + }, + { + "cell_type": "code", + "execution_count": 2, + "metadata": { + "id": "dgtRNVatzl2s" + }, + "outputs": [], + "source": [ + "import os\n", + "import highdicom as hd\n", + "from idc_index import IDCClient\n", + "import pandas as pd\n", + "from google.cloud import storage\n", + "from pathlib import Path\n", + "from typing import List, Union" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "1W3-Mp_eDwF7" + }, + "source": [ + "## Finding the `BoneMarrowWSI-PediatricLeukemia` dataset on IDC\n", + "To access and download image and ANNs files, we utilize the Python package [idc-index](https://github.com/ImagingDataCommons/idc-index) and fetch `ann_index` and `ann_group_index`, specific to DICOM ANN objects. Have a look [here](https://idc-index.readthedocs.io/en/latest/indices_reference.html) for details on all available indices in idc-index and what information you can query from them. " + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "id": "D6XmpjYFsaJy" + }, + "outputs": [], + "source": [ + "idc_client = IDCClient() # set-up idc_client\n", + "idc_client.fetch_index('ann_index') # fetch index for ANN objects\n", + "idc_client.fetch_index('ann_group_index') # fetch index for the AnnotationGroups within ANN objects" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "0HEq03G4EFtv" + }, + "source": [ + "First, we count the number of slides (=distinct SeriesInstanceUIDs of SM modality) available in the `BoneMarrowWSI-PediatricLeukemia` collection." + ] + }, + { + "cell_type": "code", + "execution_count": 4, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/" + }, + "id": "kXr1V3q_s4x0", + "outputId": "0c82ff95-a2f7-46d9-ad2a-280c68585598" + }, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + " count(DISTINCT SeriesInstanceUID)\n", + "0 246\n" + ] + } + ], + "source": [ + "query_slide_count = '''\n", + "SELECT COUNT(DISTINCT SeriesInstanceUID)\n", + "FROM\n", + " index\n", + "WHERE\n", + " collection_id = 'bonemarrowwsi_pediatricleukemia' AND Modality='SM'\n", + "'''\n", + "print(idc_client.sql_query(query_slide_count))" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "1-ZR8MkhFqKX" + }, + "source": [ + "Let's have a look at the available annotation (ANN) files. The following query collects information about ANN files on series-level from idc-index's `ann_index` joining it with the general index table on `SeriesInstanceUID`." + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 791 + }, + "id": "_jSB4Bixi_fR", + "outputId": "255a5976-4725-41c7-d169-da459a45e147" + }, + "outputs": [ + { + "data": { + "application/vnd.google.colaboratory.intrinsic+json": { + "summary": "{\n \"name\": \"annotations\",\n \"rows\": 1033,\n \"fields\": [\n {\n \"column\": \"SeriesInstanceUID\",\n \"properties\": {\n \"dtype\": \"string\",\n \"num_unique_values\": 1033,\n \"samples\": [\n \"1.2.826.0.1.3680043.10.511.3.60134570672152166458527149679884698\",\n \"1.2.826.0.1.3680043.10.511.3.3897360800787011005362181535579324\",\n \"1.2.826.0.1.3680043.10.511.3.16132353464008356345527150312706146\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"referenced_SeriesInstanceUID\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 246,\n \"samples\": [\n \"1.2.826.0.1.3680043.8.498.22605271071554882817629768329246986963\",\n \"1.2.826.0.1.3680043.8.498.1433155543183885835228124425433335548\",\n \"1.2.826.0.1.3680043.8.498.76808981161968540650514621095339800384\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"SeriesDescription\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 9,\n \"samples\": [\n \"Unlabeled cell bounding boxes\",\n \"Consensus: cell bounding boxes with cell type labels\",\n \"Session 2: Cell bounding boxes with cell type labels\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"StudyInstanceUID\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 246,\n \"samples\": [\n \"1.2.826.0.1.3680043.8.498.20735611514371421633477291419439920647\",\n \"1.2.826.0.1.3680043.8.498.63291125753705752185060274717830062227\",\n \"1.2.826.0.1.3680043.8.498.66760109851151389555965303389360298102\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n }\n ]\n}", + "type": "dataframe", + "variable_name": "annotations" + }, + "text/html": [ + "\n", + "
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\n" + ], + "text/plain": [ + " SeriesInstanceUID \\\n", + "0 1.2.826.0.1.3680043.10.511.3.91776015271042872... \n", + "1 1.2.826.0.1.3680043.10.511.3.94539084193943051... \n", + "2 1.2.826.0.1.3680043.10.511.3.70465245248160893... \n", + "3 1.2.826.0.1.3680043.10.511.3.81099351624121702... \n", + "4 1.2.826.0.1.3680043.10.511.3.46754255566554977... \n", + "... ... \n", + "1028 1.2.826.0.1.3680043.10.511.3.53100158250225700... \n", + "1029 1.2.826.0.1.3680043.10.511.3.27247460680841398... \n", + "1030 1.2.826.0.1.3680043.10.511.3.60357016090560296... \n", + "1031 1.2.826.0.1.3680043.10.511.3.95416517312103214... \n", + "1032 1.2.826.0.1.3680043.10.511.3.38880129437460258... \n", + "\n", + " referenced_SeriesInstanceUID \\\n", + "0 1.2.826.0.1.3680043.8.498.11363257719279170754... \n", + "1 1.2.826.0.1.3680043.8.498.11363257719279170754... \n", + "2 1.2.826.0.1.3680043.8.498.11363257719279170754... \n", + "3 1.2.826.0.1.3680043.8.498.11363257719279170754... \n", + "4 1.2.826.0.1.3680043.8.498.11363257719279170754... \n", + "... ... \n", + "1028 1.2.826.0.1.3680043.8.498.99096006395418595522... \n", + "1029 1.2.826.0.1.3680043.8.498.99096006395418595522... \n", + "1030 1.2.826.0.1.3680043.8.498.99096006395418595522... \n", + "1031 1.2.826.0.1.3680043.8.498.99096006395418595522... \n", + "1032 1.2.826.0.1.3680043.8.498.99096006395418595522... \n", + "\n", + " SeriesDescription \\\n", + "0 Session 1: Cell bounding boxes with cell type ... \n", + "1 Consensus: cell bounding boxes with cell type ... \n", + "2 Session 0: Cell bounding boxes with cell type ... \n", + "3 Monolayer regions of interest for cell classif... \n", + "4 Session 4: Cell bounding boxes with cell type ... \n", + "... ... \n", + "1028 Session 4: Cell bounding boxes with cell type ... \n", + "1029 Consensus: cell bounding boxes with cell type ... \n", + "1030 Session 0: Cell bounding boxes with cell type ... \n", + "1031 Session 1: Cell bounding boxes with cell type ... \n", + "1032 Session 2: Cell bounding boxes with cell type ... \n", + "\n", + " StudyInstanceUID \n", + "0 1.2.826.0.1.3680043.8.498.32796004339808195676... \n", + "1 1.2.826.0.1.3680043.8.498.32796004339808195676... \n", + "2 1.2.826.0.1.3680043.8.498.32796004339808195676... \n", + "3 1.2.826.0.1.3680043.8.498.32796004339808195676... \n", + "4 1.2.826.0.1.3680043.8.498.32796004339808195676... \n", + "... ... \n", + "1028 1.2.826.0.1.3680043.8.498.12485116558934689418... \n", + "1029 1.2.826.0.1.3680043.8.498.12485116558934689418... \n", + "1030 1.2.826.0.1.3680043.8.498.12485116558934689418... \n", + "1031 1.2.826.0.1.3680043.8.498.12485116558934689418... \n", + "1032 1.2.826.0.1.3680043.8.498.12485116558934689418... \n", + "\n", + "[1033 rows x 4 columns]" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "query_anns = '''\n", + "SELECT\n", + " ann_index.SeriesInstanceUID, -- SeriesInstanceUID of the annotation object\n", + " ann_index.referenced_SeriesInstanceUID, -- SeriesInstanceUID of the slide that the annotation is associated with\n", + " ann_index.AnnotationCoordinateType, -- whether coordinates are 2D (image coordinate system) or 3D (frame-of-reference coordinate system)\n", + " index.SeriesDescription,\n", + " index.StudyInstanceUID,\n", + "FROM\n", + " ann_index\n", + "JOIN index\n", + " ON index.SeriesInstanceUID = ann_index.SeriesInstanceUID \n", + "WHERE\n", + " index.collection_id = 'bonemarrowwsi_pediatricleukemia'\n", + "ORDER BY\n", + " ann_index.referenced_SeriesInstanceUID\n", + "'''\n", + "annotations = idc_client.sql_query(query_anns)\n", + "display(annotations)" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "kBWUmv6qHZ48" + }, + "source": [ + "We can see, that for each slide (i.e. **referencedSeriesInstanceUID**) there are multiple ANN Series. All annotations have an **AnnotationCoordinateType** of \"2D\", meaning that the coordinates are two-dimensional coordinates in the image coordinate system (more information [here](https://highdicom.readthedocs.io/en/latest/package.html#highdicom.ann.AnnotationCoordinateTypeValues)). Looking at the **SeriesDescription**, we can assert what is described in the [Background](#Background) section of this notebook.\n", + "\n", + "* Each slide has \"Monolayer regions of interest for cell classification\" annotations.\n", + "* For some slides, there is one ANN Series with \"Unlabeled cell bounding boxes\", while for others, there are multiple ANN Series containing \"Cell bounding boxes with cell type labels\" for different annotation sessions and the consensus labels.\n", + "\n", + "ANN files contain one or multiple **\"AnnotationGroups\"** (for more explanation see the aforementioned [tutorial notebook]((https://github.com/ImagingDataCommons/IDC-Tutorials/blob/master/notebooks/pathomics/microscopy_dicom_ann_intro.ipynb)) on DICOM ANNs).\n", + "Using `ann_group_index` we can get a little more information on what the individual annotation groups contain exactly. The following code cell queries the AnnotationGroupLabel - a human-readable label for the annotation group - as well as [coded values from controlled vocabularies](https://learn.canceridc.dev/dicom/coding-schemes) such as SNOMED-CT for the category and type of the annotation.\n" + ] + }, + { + "cell_type": "code", + "execution_count": 21, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 1000 + }, + "id": "qSJ-d8vS4UCE", + "outputId": "6f7fe9e8-f56f-42b6-fa7d-9e045b284451" + }, + "outputs": [ + { + "data": { + "application/vnd.google.colaboratory.intrinsic+json": { + "summary": "{\n \"name\": \"ann_groups\",\n \"rows\": 51,\n \"fields\": [\n {\n \"column\": \"AnnotationGroupLabel\",\n \"properties\": {\n \"dtype\": \"string\",\n \"num_unique_values\": 51,\n \"samples\": [\n \"degranulated_neutrophilic_metamyelocyte\",\n \"giant_platelet\",\n \"damaged_cell\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"AnnotationPropertyCategory_CodeMeaning\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 4,\n \"samples\": [\n \"Anatomical structure\",\n \"Physical object\",\n \"Spatial and relational concepts\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"AnnotationPropertyType_CodeMeaning\",\n \"properties\": {\n \"dtype\": \"string\",\n \"num_unique_values\": 50,\n \"samples\": [\n \"Basophilic erythroblast\",\n \"Macrophage\",\n \"Reactive Lymphocyte\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"series_descriptions\",\n \"properties\": {\n \"dtype\": \"object\",\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n }\n ]\n}", + "type": "dataframe", + "variable_name": "ann_groups" + }, + "text/html": [ + "\n", + "
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AnnotationGroupLabelAnnotationPropertyCategory_CodeMeaningAnnotationPropertyType_CodeMeaningseries_descriptions
0region_of_interestSpatial and relational conceptsSelected region[Monolayer regions of interest for cell classi...
1haematological_structureAnatomical structureStructure of haematological system[Unlabeled cell bounding boxes]
2megakaryocyteAnatomical structureMegakaryocyte[Session 1: Cell bounding boxes with cell type...
3promegakaryocyteAnatomical structurePromegakaryocyte[Consensus: cell bounding boxes with cell type...
4micromegakaryocyteAnatomical structureMicromegakaryocyte[Session 1: Cell bounding boxes with cell type...
5lymphoid_precursor_cellAnatomical structureLymphoid precursor cell[Session 1: Cell bounding boxes with cell type...
6basophilic_metamyelocyteAnatomical structureBasophilic metamyelocyte[Session 1: Cell bounding boxes with cell type...
7pseudo_gaucher_cellAnatomical structureGaucher-like cell[Session 2: Cell bounding boxes with cell type...
8plasma_cellAnatomical structurePlasma cell[Session 2: Cell bounding boxes with cell type...
9phagocytosisAnatomical structurePhagocytosis[Session 0: Cell bounding boxes with cell type...
10eosinophilic_bandAnatomical structureEosinophils.band form[Session 2: Cell bounding boxes with cell type...
11erythrocyteAnatomical structureErythrocyte[Session 2: Cell bounding boxes with cell type...
12spiculeAnatomical structureSpicule[Session 0: Cell bounding boxes with cell type...
13basophilic_erythroblastAnatomical structureBasophilic erythroblast[Session 0: Cell bounding boxes with cell type...
14prolymphocyteAnatomical structureProlymphocyte[Session 2: Cell bounding boxes with cell type...
15basophilic_bandAnatomical structureBasophils.band form[Session 3: Cell bounding boxes with cell type...
16segmented_basophilAnatomical structureBasophil, segmented[Session 3: Cell bounding boxes with cell type...
17smudge_cellMorphologically abnormal structureSmudge cell[Session 2: Cell bounding boxes with cell type...
18promyelocyteAnatomical structurePromyelocyte[Session 3: Cell bounding boxes with cell type...
19polychromatic_erythroblastAnatomical structurePolychromatophilic erythroblast[Session 3: Cell bounding boxes with cell type...
20segmented_neutrophilAnatomical structureSegmented neutrophil[Consensus: cell bounding boxes with cell type...
21promonocyteAnatomical structurePromonocyte[Session 3: Cell bounding boxes with cell type...
22lymphocytic_blastAnatomical structureLymphoblast[Session 2: Cell bounding boxes with cell type...
23neutrophilic_metamyelocyteAnatomical structureNeutrophilic metamyelocyte[Session 3: Cell bounding boxes with cell type...
24monocyteAnatomical structureMonocyte[Session 4: Cell bounding boxes with cell type...
25lymphocyteAnatomical structureLymphocyte[Session 2: Cell bounding boxes with cell type...
26proerythroblastAnatomical structureProerythroblast[Session 0: Cell bounding boxes with cell type...
27myelocytic_blastAnatomical structureMyeloblast[Session 4: Cell bounding boxes with cell type...
28monocytic_blastAnatomical structureMonoblast[Session 3: Cell bounding boxes with cell type...
29myeloid_precursor_cellAnatomical structureMyeloid precursor cell[Session 3: Cell bounding boxes with cell type...
30lymphoidocyteAnatomical structureReactive Lymphocyte[Session 4: Cell bounding boxes with cell type...
31segmented_eosinophilAnatomical structureEosinophil, segmented[Session 3: Cell bounding boxes with cell type...
32orthochromatic_erythroblastAnatomical structureOrthochromic erythroblast[Session 3: Cell bounding boxes with cell type...
33neutrophilic_myelocyteAnatomical structureNeutrophilic myelocyte[Session 2: Cell bounding boxes with cell type...
34neutrophil_extracellular_trapAnatomical structureNeutrophil Extracellular Trap[Session 2: Cell bounding boxes with cell type...
35basophilic_myelocyteAnatomical structureBasophilic myelocyte[Session 4: Cell bounding boxes with cell type...
36eosinophilic_metamyelocyteAnatomical structureEosinophilic metamyelocyte[Session 2: Cell bounding boxes with cell type...
37eosinophilic_myelocyteAnatomical structureEosinophilic myelocyte[Session 4: Cell bounding boxes with cell type...
38neutrophilic_bandAnatomical structureBand neutrophil[Session 2: Cell bounding boxes with cell type...
39macrophageAnatomical structureMacrophage[Session 3: Cell bounding boxes with cell type...
40giant_plateletMorphologically abnormal structureGiant platelet[Session 4: Cell bounding boxes with cell type...
41mitosisAnatomical structureMitotic cell[Session 2: Cell bounding boxes with cell type...
42degranulated_neutrophilic_myelocyteAnatomical structureHypogranular white blood cell[Session 2: Cell bounding boxes with cell type...
43degranulated_neutrophilic_metamyelocyteAnatomical structureNeutrophil with Cytoplasmic Hypogranularity[Session 2: Cell bounding boxes with cell type...
44technically_unfitSpatial and relational conceptsUnusable - Quality renders image unusable[Session 3: Cell bounding boxes with cell type...
45no_consensus_foundAnatomical structureStructure of haematological system[Session 2: Cell bounding boxes with cell type...
46damaged_cellMorphologically abnormal structureDamage[Session 3: Cell bounding boxes with cell type...
47thrombocyte_aggregateAnatomical structurePlatelet aggregation[Session 1: Cell bounding boxes with cell type...
48unknown_blastAnatomical structureBlast cell[Consensus: cell bounding boxes with cell type...
49thrombocyteAnatomical structureThrombocyte[Session 1: Cell bounding boxes with cell type...
50artifactPhysical objectArtifact[Session 3: Cell bounding boxes with cell type...
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\n" + ], + "text/plain": [ + " AnnotationGroupLabel \\\n", + "0 region_of_interest \n", + "1 haematological_structure \n", + "2 megakaryocyte \n", + "3 promegakaryocyte \n", + "4 micromegakaryocyte \n", + "5 lymphoid_precursor_cell \n", + "6 basophilic_metamyelocyte \n", + "7 pseudo_gaucher_cell \n", + "8 plasma_cell \n", + "9 phagocytosis \n", + "10 eosinophilic_band \n", + "11 erythrocyte \n", + "12 spicule \n", + "13 basophilic_erythroblast \n", + "14 prolymphocyte \n", + "15 basophilic_band \n", + "16 segmented_basophil \n", + "17 smudge_cell \n", + "18 promyelocyte \n", + "19 polychromatic_erythroblast \n", + "20 segmented_neutrophil \n", + "21 promonocyte \n", + "22 lymphocytic_blast \n", + "23 neutrophilic_metamyelocyte \n", + "24 monocyte \n", + "25 lymphocyte \n", + "26 proerythroblast \n", + "27 myelocytic_blast \n", + "28 monocytic_blast \n", + "29 myeloid_precursor_cell \n", + "30 lymphoidocyte \n", + "31 segmented_eosinophil \n", + "32 orthochromatic_erythroblast \n", + "33 neutrophilic_myelocyte \n", + "34 neutrophil_extracellular_trap \n", + "35 basophilic_myelocyte \n", + "36 eosinophilic_metamyelocyte \n", + "37 eosinophilic_myelocyte \n", + "38 neutrophilic_band \n", + "39 macrophage \n", + "40 giant_platelet \n", + "41 mitosis \n", + "42 degranulated_neutrophilic_myelocyte \n", + "43 degranulated_neutrophilic_metamyelocyte \n", + "44 technically_unfit \n", + "45 no_consensus_found \n", + "46 damaged_cell \n", + "47 thrombocyte_aggregate \n", + "48 unknown_blast \n", + "49 thrombocyte \n", + "50 artifact \n", + "\n", + " AnnotationPropertyCategory_CodeMeaning \\\n", + "0 Spatial and relational concepts \n", + "1 Anatomical structure \n", + "2 Anatomical structure \n", + "3 Anatomical structure \n", + "4 Anatomical structure \n", + "5 Anatomical structure \n", + "6 Anatomical structure \n", + "7 Anatomical structure \n", + "8 Anatomical structure \n", + "9 Anatomical structure \n", + "10 Anatomical structure \n", + "11 Anatomical structure \n", + "12 Anatomical structure \n", + "13 Anatomical structure \n", + "14 Anatomical structure \n", + "15 Anatomical structure \n", + "16 Anatomical structure \n", + "17 Morphologically abnormal structure \n", + "18 Anatomical structure \n", + "19 Anatomical structure \n", + "20 Anatomical structure \n", + "21 Anatomical structure \n", + "22 Anatomical structure \n", + "23 Anatomical structure \n", + "24 Anatomical structure \n", + "25 Anatomical structure \n", + "26 Anatomical structure \n", + "27 Anatomical structure \n", + "28 Anatomical structure \n", + "29 Anatomical structure \n", + "30 Anatomical structure \n", + "31 Anatomical structure \n", + "32 Anatomical structure \n", + "33 Anatomical structure \n", + "34 Anatomical structure \n", + "35 Anatomical structure \n", + "36 Anatomical structure \n", + "37 Anatomical structure \n", + "38 Anatomical structure \n", + "39 Anatomical structure \n", + "40 Morphologically abnormal structure \n", + "41 Anatomical structure \n", + "42 Anatomical structure \n", + "43 Anatomical structure \n", + "44 Spatial and relational concepts \n", + "45 Anatomical structure \n", + "46 Morphologically abnormal structure \n", + "47 Anatomical structure \n", + "48 Anatomical structure \n", + "49 Anatomical structure \n", + "50 Physical object \n", + "\n", + " AnnotationPropertyType_CodeMeaning \\\n", + "0 Selected region \n", + "1 Structure of haematological system \n", + "2 Megakaryocyte \n", + "3 Promegakaryocyte \n", + "4 Micromegakaryocyte \n", + "5 Lymphoid precursor cell \n", + "6 Basophilic metamyelocyte \n", + "7 Gaucher-like cell \n", + "8 Plasma cell \n", + "9 Phagocytosis \n", + "10 Eosinophils.band form \n", + "11 Erythrocyte \n", + "12 Spicule \n", + "13 Basophilic erythroblast \n", + "14 Prolymphocyte \n", + "15 Basophils.band form \n", + "16 Basophil, segmented \n", + "17 Smudge cell \n", + "18 Promyelocyte \n", + "19 Polychromatophilic erythroblast \n", + "20 Segmented neutrophil \n", + "21 Promonocyte \n", + "22 Lymphoblast \n", + "23 Neutrophilic metamyelocyte \n", + "24 Monocyte \n", + "25 Lymphocyte \n", + "26 Proerythroblast \n", + "27 Myeloblast \n", + "28 Monoblast \n", + "29 Myeloid precursor cell \n", + "30 Reactive Lymphocyte \n", + "31 Eosinophil, segmented \n", + "32 Orthochromic erythroblast \n", + "33 Neutrophilic myelocyte \n", + "34 Neutrophil Extracellular Trap \n", + "35 Basophilic myelocyte \n", + "36 Eosinophilic metamyelocyte \n", + "37 Eosinophilic myelocyte \n", + "38 Band neutrophil \n", + "39 Macrophage \n", + "40 Giant platelet \n", + "41 Mitotic cell \n", + "42 Hypogranular white blood cell \n", + "43 Neutrophil with Cytoplasmic Hypogranularity \n", + "44 Unusable - Quality renders image unusable \n", + "45 Structure of haematological system \n", + "46 Damage \n", + "47 Platelet aggregation \n", + "48 Blast cell \n", + "49 Thrombocyte \n", + "50 Artifact \n", + "\n", + " series_descriptions \n", + "0 [Monolayer regions of interest for cell classi... \n", + "1 [Unlabeled cell bounding boxes] \n", + "2 [Session 1: Cell bounding boxes with cell type... \n", + "3 [Consensus: cell bounding boxes with cell type... \n", + "4 [Session 1: Cell bounding boxes with cell type... \n", + "5 [Session 1: Cell bounding boxes with cell type... \n", + "6 [Session 1: Cell bounding boxes with cell type... \n", + "7 [Session 2: Cell bounding boxes with cell type... \n", + "8 [Session 2: Cell bounding boxes with cell type... \n", + "9 [Session 0: Cell bounding boxes with cell type... \n", + "10 [Session 2: Cell bounding boxes with cell type... \n", + "11 [Session 2: Cell bounding boxes with cell type... \n", + "12 [Session 0: Cell bounding boxes with cell type... \n", + "13 [Session 0: Cell bounding boxes with cell type... \n", + "14 [Session 2: Cell bounding boxes with cell type... \n", + "15 [Session 3: Cell bounding boxes with cell type... \n", + "16 [Session 3: Cell bounding boxes with cell type... \n", + "17 [Session 2: Cell bounding boxes with cell type... \n", + "18 [Session 3: Cell bounding boxes with cell type... \n", + "19 [Session 3: Cell bounding boxes with cell type... \n", + "20 [Consensus: cell bounding boxes with cell type... \n", + "21 [Session 3: Cell bounding boxes with cell type... \n", + "22 [Session 2: Cell bounding boxes with cell type... \n", + "23 [Session 3: Cell bounding boxes with cell type... \n", + "24 [Session 4: Cell bounding boxes with cell type... \n", + "25 [Session 2: Cell bounding boxes with cell type... \n", + "26 [Session 0: Cell bounding boxes with cell type... \n", + "27 [Session 4: Cell bounding boxes with cell type... \n", + "28 [Session 3: Cell bounding boxes with cell type... \n", + "29 [Session 3: Cell bounding boxes with cell type... \n", + "30 [Session 4: Cell bounding boxes with cell type... \n", + "31 [Session 3: Cell bounding boxes with cell type... \n", + "32 [Session 3: Cell bounding boxes with cell type... \n", + "33 [Session 2: Cell bounding boxes with cell type... \n", + "34 [Session 2: Cell bounding boxes with cell type... \n", + "35 [Session 4: Cell bounding boxes with cell type... \n", + "36 [Session 2: Cell bounding boxes with cell type... \n", + "37 [Session 4: Cell bounding boxes with cell type... \n", + "38 [Session 2: Cell bounding boxes with cell type... \n", + "39 [Session 3: Cell bounding boxes with cell type... \n", + "40 [Session 4: Cell bounding boxes with cell type... \n", + "41 [Session 2: Cell bounding boxes with cell type... \n", + "42 [Session 2: Cell bounding boxes with cell type... \n", + "43 [Session 2: Cell bounding boxes with cell type... \n", + "44 [Session 3: Cell bounding boxes with cell type... \n", + "45 [Session 2: Cell bounding boxes with cell type... \n", + "46 [Session 3: Cell bounding boxes with cell type... \n", + "47 [Session 1: Cell bounding boxes with cell type... \n", + "48 [Consensus: cell bounding boxes with cell type... \n", + "49 [Session 1: Cell bounding boxes with cell type... \n", + "50 [Session 3: Cell bounding boxes with cell type... " + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "query_ann_groups = '''\n", + "SELECT\n", + " ag.AnnotationGroupLabel, -- human-readable label of annotation group\n", + " ag.AnnotationPropertyCategory_CodeMeaning, -- Code meaning of coded value for the category of the annotation group\n", + " ag.AnnotationPropertyType_CodeMeaning, -- Code meaning of coded value for the type of the annotation group\n", + " ARRAY_AGG(DISTINCT i.SeriesDescription) AS series_descriptions\n", + "FROM ann_group_index ag\n", + "JOIN ann_index ai\n", + " ON ag.SeriesInstanceUID = ai.SeriesInstanceUID\n", + "JOIN index i\n", + " ON ag.SeriesInstanceUID = i.SeriesInstanceUID\n", + "WHERE\n", + " i.collection_id = 'bonemarrowwsi_pediatricleukemia'\n", + "GROUP BY\n", + " ag.AnnotationGroupLabel,\n", + " ag.AnnotationPropertyCategory_CodeMeaning,\n", + " ag.AnnotationPropertyType_CodeMeaning,\n", + "ORDER BY\n", + " LEN(series_descriptions)\n", + "'''\n", + "\n", + "ann_groups = idc_client.sql_query(query_ann_groups)\n", + "display(ann_groups)" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "bQAkkmOEMSu9" + }, + "source": [ + "Relating the annotated objects to the SeriesDescription, we can see, that\n", + "\n", + "- ANN Series \"Monolayer regions of interest for cell classification\" contain only annotations with AnnotatedPropertyType \"Selected region\" and the human-readable label \"region_of_interest\".\n", + "- \"Unlabeled cell bounding boxes\" contain only annotations with property type \"Structure of haematological system\" and the human-readable label \"haematological_structure\"\n", + "- all other ANN Series contain various different AnnotatedPropertyTypes and human-readable labels.\n", + "\n", + "We will use this information below to filter for the monolayer ROIs and labeled vs. unlabeled cell annotations." + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "bd3j23XK7Ren" + }, + "source": [ + "## Viewing annotations\n" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "a_-BRDWSF7A2" + }, + "source": [ + "Annotations can be viewed and explored in detail on its respective slide using the Slim viewer. In the Slim viewer's interface at the bottom of the right sidebar you may select the ANN Series of interest to you from the drop-down menue, then click on `Annotation Groups` and switch the slider(s) to make annotations visible." + ] + }, + { + "cell_type": "code", + "execution_count": 6, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 941 + }, + "id": "AhO13xdLw3p-", + "outputId": "46425583-34ab-4adb-a450-9d7f2ca5a3d5" + }, + "outputs": [ + { + "data": { + "text/html": [ + "\n", + " \n", + " " + ], + "text/plain": [ + "" + ] + }, + "execution_count": 6, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "viewer_url = idc_client.get_viewer_URL(studyInstanceUID=annotations['StudyInstanceUID'][0], viewer_selector='slim')\n", + "from IPython.display import IFrame\n", + "IFrame(viewer_url, width=1500, height=900)" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "KLpFrRBj7f2v" + }, + "source": [ + "## Accessing annotations" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "SY9wu5004-dt" + }, + "source": [ + "### Download complete annotation collection for local access\n", + "Since the complete set of annotation series is of reasonable size it could be downloaded completely using `idc_index` as shown below and then accessed from the local disk using `highdicom`." + ] + }, + { + "cell_type": "code", + "execution_count": 7, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/" + }, + "id": "sd8Z20qh5SFs", + "outputId": "41c8cae1-137a-474b-d121-3edfe917c317" + }, + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "Downloading data: 93%|█████████▎| 17.1M/18.4M [00:05<00:00, 2.96MB/s]\n" + ] + } + ], + "source": [ + "dcm_ann_dir = Path('/content/dicom_ann_annotations')\n", + "os.makedirs(dcm_ann_dir, exist_ok=True)\n", + "\n", + "idc_client.download_from_selection(downloadDir=dcm_ann_dir,\n", + " seriesInstanceUID=annotations['SeriesInstanceUID'].tolist(), dirTemplate=None)" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "bkGaAD9t6-Dg" + }, + "source": [ + "For guidance on how to read the downloaded annotation files see section \"Reading DICOM ANNs\" of [this tutorial notebook](https://github.com/ImagingDataCommons/IDC-Tutorials/blob/master/notebooks/pathomics/microscopy_dicom_ann_intro.ipynb)." + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "WHvZRtVE5ByF" + }, + "source": [ + "### Access annotations directly from the Cloud\n", + "\n", + "A more desirable approach especially for larger size datasets is to directly extract the relevant information from the objects in the cloud. The following functions `get_roi_annotations()` and `get_cell_annotations()` can be used for this approach. They extract and summarize ROIs respectively cell annotations in an easy to use pandas DataFrame.\n", + "Note, that the selection of the respective annotation files, i.e. files containing ROI annotations, labeled or unlabeled cell annotations, is done by filtering for the respective AnnotationPropertyTypes as determined above." + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "XKzx9B1fU9ed" + }, + "source": [ + "The following two code cells define and use `get_roi_annotations()` to select all DICOM ANNs in the `BoneMarrowWSI-PediatricLeukemia` collection that contain ROI annotations of the monolayer area.\n", + "The resulting pandas DataFrame contains\n", + "- **'SeriesInstanceUID'**: SeriesInstanceUID of the DICOM ANN Series containing the ROI annotation\n", + "- **'roi_id'**: the ID of the ROI\n", + "- **'roi_human_label'**: its human-readable label \n", + "- **'roi_label_code_scheme'**: Tuple of code of the ROI label and designator of the coding scheme used, e.g. (111099, DCM) which is code 111099 from the DICOM controlled terminology\n", + "- **'roi_label'**: Code meaning of the ROI label\n", + "- **'roi_coordinates'**: the 2D coordinates in the image coordinate system of the referenced slide level\n", + "- **'reference_SeriesInstanceUID'** and **'reference_SOPInstanceUID'**: the SeriesInstanceUID and SOPInstanceUID of the slide level the annotations refer to. reference_SeriesInstanceUID can either be obtained from `ann_index` or read from the ANN file directly - for consistency with reference_SOPInstanceUID the later approach was chosen here.\n" + ] + }, + { + "cell_type": "code", + "execution_count": 24, + "metadata": { + "id": "IpLUim520o5B" + }, + "outputs": [], + "source": [ + "def get_roi_annotations(ann_to_process: int = 10):\n", + " # Select all annotation groups from ANN series in the bonemarrowwsi_pediatricleukemia collection\n", + " # whose AnnotationPropertyType is \"Selected region\" and AnnotationGroupLabel is \"region_of_interest\"\n", + " query_roi_anns = f'''\n", + " SELECT\n", + " ag.SeriesInstanceUID\n", + " FROM\n", + " ann_group_index ag\n", + " JOIN ann_index ai\n", + " ON ag.SeriesInstanceUID = ai.SeriesInstanceUID\n", + " JOIN index i\n", + " ON ag.SeriesInstanceUID = i.SeriesInstanceUID\n", + " WHERE\n", + " i.collection_id = 'bonemarrowwsi_pediatricleukemia'\n", + " AND ag.AnnotationPropertyType_CodeMeaning = 'Selected region'\n", + " AND ag.AnnotationGroupLabel = 'region_of_interest'\n", + " ORDER BY\n", + " ag.SeriesInstanceUID\n", + " LIMIT {ann_to_process}\n", + " '''\n", + " roi_series = idc_client.sql_query(query_roi_anns)['SeriesInstanceUID']\n", + " rois = extract_rois(roi_series)\n", + " return rois\n", + "\n", + "\n", + "def extract_rois(series_uids: List[str]) -> pd.DataFrame:\n", + " gcs_client = storage.Client.create_anonymous_client()\n", + " rows = []\n", + " for series_uid in series_uids:\n", + " file_urls = idc_client.get_series_file_URLs(seriesInstanceUID=series_uid, source_bucket_location='gcs')\n", + " for file_url in file_urls:\n", + " (_,_, bucket_name, folder_name, file_name) = file_url.split('/')\n", + " bucket = gcs_client.bucket(bucket_name)\n", + " blob = bucket.blob(f'{folder_name}/{file_name}')\n", + "\n", + " with blob.open('rb') as file_obj:\n", + " ann = hd.ann.annread(file_obj)\n", + " for ann_group in ann.get_annotation_groups():\n", + " coords = ann_group.get_graphic_data(coordinate_type='2D')\n", + " m_names, m_values, m_units = ann_group.get_measurements()\n", + " for c, m in zip(coords, m_values):\n", + " rows.append({\n", + " 'SeriesInstanceUID': ann.SeriesInstanceUID,\n", + " 'roi_id': int(m[0]), # allow empty roi_id,\n", + " 'roi_human_label': ann_group.label,\n", + " 'roi_label_code_scheme': (ann_group.annotated_property_type.CodeValue, ann_group.annotated_property_type.CodingSchemeDesignator),\n", + " 'roi_label': ann_group.annotated_property_type.CodeMeaning,\n", + " 'roi_coordinates': c,\n", + " 'reference_SeriesInstanceUID': ann.ReferencedSeriesSequence[0].SeriesInstanceUID,\n", + " 'reference_SOPInstanceUID': ann.ReferencedImageSequence[0].ReferencedSOPInstanceUID,\n", + " })\n", + " rois = pd.DataFrame(rows)\n", + " return rois" + ] + }, + { + "cell_type": "code", + "execution_count": 25, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 1000 + }, + "id": "25MV1-Mb2CYt", + "outputId": "d94da6fa-dcf0-4c15-c668-75cbb628dd04" + }, + "outputs": [ + { + "data": { + "application/vnd.google.colaboratory.intrinsic+json": { + "summary": "{\n \"name\": \"rois\",\n \"rows\": 25,\n \"fields\": [\n {\n \"column\": \"SeriesInstanceUID\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 10,\n \"samples\": [\n \"1.2.826.0.1.3680043.10.511.3.1297400433439649891879209150275017\",\n \"1.2.826.0.1.3680043.10.511.3.1037050862156700531334700169945496\",\n \"1.2.826.0.1.3680043.10.511.3.11740597179801433454513646839448252\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"roi_id\",\n \"properties\": {\n \"dtype\": \"number\",\n \"std\": 677,\n \"min\": 124,\n \"max\": 2386,\n \"num_unique_values\": 25,\n \"samples\": [\n 2017,\n 2386,\n 1152\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"roi_human_label\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 1,\n \"samples\": [\n \"region_of_interest\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"roi_label_code_scheme\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 1,\n \"samples\": [\n [\n \"111099\",\n \"DCM\"\n ]\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"roi_label\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 1,\n \"samples\": [\n \"Selected region\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"roi_coordinates\",\n \"properties\": {\n \"dtype\": \"object\",\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"reference_SeriesInstanceUID\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 10,\n \"samples\": [\n \"1.2.826.0.1.3680043.8.498.15643097382403802867996843707781740938\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"reference_SOPInstanceUID\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 10,\n \"samples\": [\n \"1.2.826.0.1.3680043.8.498.62009000468389411501316862767459748848\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n }\n ]\n}", + "type": "dataframe", + "variable_name": "rois" + }, + "text/html": [ + "\n", + "
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SeriesInstanceUIDroi_idroi_human_labelroi_label_code_schemeroi_labelroi_coordinatesreference_SeriesInstanceUIDreference_SOPInstanceUID
01.2.826.0.1.3680043.10.511.3.10076145498370342...1152region_of_interest(111099, DCM)Selected region[[97220.0, 195768.0], [99268.0, 195768.0], [99...1.2.826.0.1.3680043.8.498.32484296459223334560...1.2.826.0.1.3680043.8.498.87476043951163326277...
11.2.826.0.1.3680043.10.511.3.10076145498370342...1153region_of_interest(111099, DCM)Selected region[[98892.0, 160318.0], [100940.0, 160318.0], [1...1.2.826.0.1.3680043.8.498.32484296459223334560...1.2.826.0.1.3680043.8.498.87476043951163326277...
21.2.826.0.1.3680043.10.511.3.10370508621567005...1018region_of_interest(111099, DCM)Selected region[[113423.0, 326838.0], [115471.0, 326838.0], [...1.2.826.0.1.3680043.8.498.76034665511943175311...1.2.826.0.1.3680043.8.498.10662747416486796732...
31.2.826.0.1.3680043.10.511.3.10370508621567005...1019region_of_interest(111099, DCM)Selected region[[30933.0, 380620.0], [32981.0, 380620.0], [32...1.2.826.0.1.3680043.8.498.76034665511943175311...1.2.826.0.1.3680043.8.498.10662747416486796732...
41.2.826.0.1.3680043.10.511.3.10509566419026275...2037region_of_interest(111099, DCM)Selected region[[48237.0, 89186.0], [50285.0, 89186.0], [5028...1.2.826.0.1.3680043.8.498.17135957873481360405...1.2.826.0.1.3680043.8.498.61055026268823152919...
51.2.826.0.1.3680043.10.511.3.10509566419026275...2038region_of_interest(111099, DCM)Selected region[[25890.0, 97475.0], [27938.0, 97475.0], [2793...1.2.826.0.1.3680043.8.498.17135957873481360405...1.2.826.0.1.3680043.8.498.61055026268823152919...
61.2.826.0.1.3680043.10.511.3.11224067190602751...322region_of_interest(111099, DCM)Selected region[[40807.0, 31720.0], [42855.0, 31720.0], [4285...1.2.826.0.1.3680043.8.498.82223767803353692585...1.2.826.0.1.3680043.8.498.72082594196695068782...
71.2.826.0.1.3680043.10.511.3.11224067190602751...323region_of_interest(111099, DCM)Selected region[[41251.0, 26908.0], [43299.0, 26908.0], [4329...1.2.826.0.1.3680043.8.498.82223767803353692585...1.2.826.0.1.3680043.8.498.72082594196695068782...
81.2.826.0.1.3680043.10.511.3.11224067190602751...2017region_of_interest(111099, DCM)Selected region[[25157.0, 41317.0], [30531.0, 41317.0], [3053...1.2.826.0.1.3680043.8.498.82223767803353692585...1.2.826.0.1.3680043.8.498.72082594196695068782...
91.2.826.0.1.3680043.10.511.3.11224067190602751...2018region_of_interest(111099, DCM)Selected region[[83712.0, 75137.0], [88720.0, 75137.0], [8872...1.2.826.0.1.3680043.8.498.82223767803353692585...1.2.826.0.1.3680043.8.498.72082594196695068782...
101.2.826.0.1.3680043.10.511.3.11224067190602751...2019region_of_interest(111099, DCM)Selected region[[70548.0, 93491.0], [73903.0, 93491.0], [7390...1.2.826.0.1.3680043.8.498.82223767803353692585...1.2.826.0.1.3680043.8.498.72082594196695068782...
111.2.826.0.1.3680043.10.511.3.11224067190602751...2020region_of_interest(111099, DCM)Selected region[[79658.0, 95782.0], [84910.0, 95782.0], [8491...1.2.826.0.1.3680043.8.498.82223767803353692585...1.2.826.0.1.3680043.8.498.72082594196695068782...
121.2.826.0.1.3680043.10.511.3.11352696825197217...1142region_of_interest(111099, DCM)Selected region[[24071.0, 157895.0], [26119.0, 157895.0], [26...1.2.826.0.1.3680043.8.498.90020006626384854604...1.2.826.0.1.3680043.8.498.82484698023439443119...
131.2.826.0.1.3680043.10.511.3.11352696825197217...1143region_of_interest(111099, DCM)Selected region[[92430.0, 170702.0], [94478.0, 170702.0], [94...1.2.826.0.1.3680043.8.498.90020006626384854604...1.2.826.0.1.3680043.8.498.82484698023439443119...
141.2.826.0.1.3680043.10.511.3.11740597179801433...314region_of_interest(111099, DCM)Selected region[[57300.0, 97576.0], [59348.0, 97576.0], [5934...1.2.826.0.1.3680043.8.498.16352996714899771148...1.2.826.0.1.3680043.8.498.90407059464609632618...
151.2.826.0.1.3680043.10.511.3.11740597179801433...315region_of_interest(111099, DCM)Selected region[[83586.0, 86835.0], [85634.0, 86835.0], [8563...1.2.826.0.1.3680043.8.498.16352996714899771148...1.2.826.0.1.3680043.8.498.90407059464609632618...
161.2.826.0.1.3680043.10.511.3.11740597179801433...2386region_of_interest(111099, DCM)Selected region[[126979.0, 91475.0], [136698.0, 91475.0], [13...1.2.826.0.1.3680043.8.498.16352996714899771148...1.2.826.0.1.3680043.8.498.90407059464609632618...
171.2.826.0.1.3680043.10.511.3.11858948237616323...1138region_of_interest(111099, DCM)Selected region[[95067.0, 96866.0], [97115.0, 96866.0], [9711...1.2.826.0.1.3680043.8.498.87091799378597868601...1.2.826.0.1.3680043.8.498.10776604486330803330...
181.2.826.0.1.3680043.10.511.3.11858948237616323...1139region_of_interest(111099, DCM)Selected region[[24312.0, 121079.0], [26360.0, 121079.0], [26...1.2.826.0.1.3680043.8.498.87091799378597868601...1.2.826.0.1.3680043.8.498.10776604486330803330...
191.2.826.0.1.3680043.10.511.3.12558485689795502...1088region_of_interest(111099, DCM)Selected region[[90845.0, 262328.0], [92893.0, 262328.0], [92...1.2.826.0.1.3680043.8.498.25627346080320049595...1.2.826.0.1.3680043.8.498.46954733820485882617...
201.2.826.0.1.3680043.10.511.3.12558485689795502...1089region_of_interest(111099, DCM)Selected region[[91772.0, 270789.0], [93820.0, 270789.0], [93...1.2.826.0.1.3680043.8.498.25627346080320049595...1.2.826.0.1.3680043.8.498.46954733820485882617...
211.2.826.0.1.3680043.10.511.3.12974004334396498...1182region_of_interest(111099, DCM)Selected region[[92669.0, 92117.0], [94717.0, 92117.0], [9471...1.2.826.0.1.3680043.8.498.15643097382403802867...1.2.826.0.1.3680043.8.498.62009000468389411501...
221.2.826.0.1.3680043.10.511.3.12974004334396498...1183region_of_interest(111099, DCM)Selected region[[18436.0, 92641.0], [20484.0, 92641.0], [2048...1.2.826.0.1.3680043.8.498.15643097382403802867...1.2.826.0.1.3680043.8.498.62009000468389411501...
231.2.826.0.1.3680043.10.511.3.13462860157928463...124region_of_interest(111099, DCM)Selected region[[91397.0, 100884.0], [93445.0, 100884.0], [93...1.2.826.0.1.3680043.8.498.19330970639243127865...1.2.826.0.1.3680043.8.498.14811868708681134259...
241.2.826.0.1.3680043.10.511.3.13462860157928463...125region_of_interest(111099, DCM)Selected region[[47414.0, 134819.0], [49462.0, 134819.0], [49...1.2.826.0.1.3680043.8.498.19330970639243127865...1.2.826.0.1.3680043.8.498.14811868708681134259...
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1.2.826.0.1.3680043.10.511.3.11740597179801433... 314 \n", + "15 1.2.826.0.1.3680043.10.511.3.11740597179801433... 315 \n", + "16 1.2.826.0.1.3680043.10.511.3.11740597179801433... 2386 \n", + "17 1.2.826.0.1.3680043.10.511.3.11858948237616323... 1138 \n", + "18 1.2.826.0.1.3680043.10.511.3.11858948237616323... 1139 \n", + "19 1.2.826.0.1.3680043.10.511.3.12558485689795502... 1088 \n", + "20 1.2.826.0.1.3680043.10.511.3.12558485689795502... 1089 \n", + "21 1.2.826.0.1.3680043.10.511.3.12974004334396498... 1182 \n", + "22 1.2.826.0.1.3680043.10.511.3.12974004334396498... 1183 \n", + "23 1.2.826.0.1.3680043.10.511.3.13462860157928463... 124 \n", + "24 1.2.826.0.1.3680043.10.511.3.13462860157928463... 125 \n", + "\n", + " roi_human_label roi_label_code_scheme roi_label \\\n", + "0 region_of_interest (111099, DCM) Selected region \n", + "1 region_of_interest (111099, DCM) Selected region \n", + "2 region_of_interest (111099, DCM) Selected region \n", + "3 region_of_interest (111099, DCM) Selected region \n", + "4 region_of_interest (111099, DCM) Selected region \n", + "5 region_of_interest (111099, DCM) Selected region \n", + "6 region_of_interest (111099, DCM) Selected region \n", + "7 region_of_interest (111099, DCM) Selected region \n", + "8 region_of_interest (111099, DCM) Selected region \n", + "9 region_of_interest (111099, DCM) Selected region \n", + "10 region_of_interest (111099, DCM) Selected region \n", + "11 region_of_interest (111099, DCM) Selected region \n", + "12 region_of_interest (111099, DCM) Selected region \n", + "13 region_of_interest (111099, DCM) Selected region \n", + "14 region_of_interest (111099, DCM) Selected region \n", + "15 region_of_interest (111099, DCM) Selected region \n", + "16 region_of_interest (111099, DCM) Selected region \n", + "17 region_of_interest (111099, DCM) Selected region \n", + "18 region_of_interest (111099, DCM) Selected region \n", + "19 region_of_interest (111099, DCM) Selected region \n", + "20 region_of_interest (111099, DCM) Selected region \n", + "21 region_of_interest (111099, DCM) Selected region \n", + "22 region_of_interest (111099, DCM) Selected region \n", + "23 region_of_interest (111099, DCM) Selected region \n", + "24 region_of_interest (111099, DCM) Selected region \n", + "\n", + " roi_coordinates \\\n", + "0 [[97220.0, 195768.0], [99268.0, 195768.0], [99... \n", + "1 [[98892.0, 160318.0], [100940.0, 160318.0], [1... \n", + "2 [[113423.0, 326838.0], [115471.0, 326838.0], [... \n", + "3 [[30933.0, 380620.0], [32981.0, 380620.0], [32... \n", + "4 [[48237.0, 89186.0], [50285.0, 89186.0], [5028... \n", + "5 [[25890.0, 97475.0], [27938.0, 97475.0], [2793... \n", + "6 [[40807.0, 31720.0], [42855.0, 31720.0], [4285... \n", + "7 [[41251.0, 26908.0], [43299.0, 26908.0], [4329... \n", + "8 [[25157.0, 41317.0], [30531.0, 41317.0], [3053... \n", + "9 [[83712.0, 75137.0], [88720.0, 75137.0], [8872... \n", + "10 [[70548.0, 93491.0], [73903.0, 93491.0], [7390... \n", + "11 [[79658.0, 95782.0], [84910.0, 95782.0], [8491... \n", + "12 [[24071.0, 157895.0], [26119.0, 157895.0], [26... \n", + "13 [[92430.0, 170702.0], [94478.0, 170702.0], [94... \n", + "14 [[57300.0, 97576.0], [59348.0, 97576.0], [5934... \n", + "15 [[83586.0, 86835.0], [85634.0, 86835.0], [8563... \n", + "16 [[126979.0, 91475.0], [136698.0, 91475.0], [13... \n", + "17 [[95067.0, 96866.0], [97115.0, 96866.0], [9711... \n", + "18 [[24312.0, 121079.0], [26360.0, 121079.0], [26... \n", + "19 [[90845.0, 262328.0], [92893.0, 262328.0], [92... \n", + "20 [[91772.0, 270789.0], [93820.0, 270789.0], [93... \n", + "21 [[92669.0, 92117.0], [94717.0, 92117.0], [9471... \n", + "22 [[18436.0, 92641.0], [20484.0, 92641.0], [2048... \n", + "23 [[91397.0, 100884.0], [93445.0, 100884.0], [93... \n", + "24 [[47414.0, 134819.0], [49462.0, 134819.0], [49... \n", + "\n", + " reference_SeriesInstanceUID \\\n", + "0 1.2.826.0.1.3680043.8.498.32484296459223334560... \n", + "1 1.2.826.0.1.3680043.8.498.32484296459223334560... \n", + "2 1.2.826.0.1.3680043.8.498.76034665511943175311... \n", + "3 1.2.826.0.1.3680043.8.498.76034665511943175311... \n", + "4 1.2.826.0.1.3680043.8.498.17135957873481360405... \n", + "5 1.2.826.0.1.3680043.8.498.17135957873481360405... \n", + "6 1.2.826.0.1.3680043.8.498.82223767803353692585... \n", + "7 1.2.826.0.1.3680043.8.498.82223767803353692585... \n", + "8 1.2.826.0.1.3680043.8.498.82223767803353692585... \n", + "9 1.2.826.0.1.3680043.8.498.82223767803353692585... \n", + "10 1.2.826.0.1.3680043.8.498.82223767803353692585... \n", + "11 1.2.826.0.1.3680043.8.498.82223767803353692585... \n", + "12 1.2.826.0.1.3680043.8.498.90020006626384854604... \n", + "13 1.2.826.0.1.3680043.8.498.90020006626384854604... \n", + "14 1.2.826.0.1.3680043.8.498.16352996714899771148... \n", + "15 1.2.826.0.1.3680043.8.498.16352996714899771148... \n", + "16 1.2.826.0.1.3680043.8.498.16352996714899771148... \n", + "17 1.2.826.0.1.3680043.8.498.87091799378597868601... \n", + "18 1.2.826.0.1.3680043.8.498.87091799378597868601... \n", + "19 1.2.826.0.1.3680043.8.498.25627346080320049595... \n", + "20 1.2.826.0.1.3680043.8.498.25627346080320049595... \n", + "21 1.2.826.0.1.3680043.8.498.15643097382403802867... \n", + "22 1.2.826.0.1.3680043.8.498.15643097382403802867... \n", + "23 1.2.826.0.1.3680043.8.498.19330970639243127865... \n", + "24 1.2.826.0.1.3680043.8.498.19330970639243127865... \n", + "\n", + " reference_SOPInstanceUID \n", + "0 1.2.826.0.1.3680043.8.498.87476043951163326277... \n", + "1 1.2.826.0.1.3680043.8.498.87476043951163326277... \n", + "2 1.2.826.0.1.3680043.8.498.10662747416486796732... \n", + "3 1.2.826.0.1.3680043.8.498.10662747416486796732... \n", + "4 1.2.826.0.1.3680043.8.498.61055026268823152919... \n", + "5 1.2.826.0.1.3680043.8.498.61055026268823152919... \n", + "6 1.2.826.0.1.3680043.8.498.72082594196695068782... \n", + "7 1.2.826.0.1.3680043.8.498.72082594196695068782... \n", + "8 1.2.826.0.1.3680043.8.498.72082594196695068782... \n", + "9 1.2.826.0.1.3680043.8.498.72082594196695068782... \n", + "10 1.2.826.0.1.3680043.8.498.72082594196695068782... \n", + "11 1.2.826.0.1.3680043.8.498.72082594196695068782... \n", + "12 1.2.826.0.1.3680043.8.498.82484698023439443119... \n", + "13 1.2.826.0.1.3680043.8.498.82484698023439443119... \n", + "14 1.2.826.0.1.3680043.8.498.90407059464609632618... \n", + "15 1.2.826.0.1.3680043.8.498.90407059464609632618... \n", + "16 1.2.826.0.1.3680043.8.498.90407059464609632618... \n", + "17 1.2.826.0.1.3680043.8.498.10776604486330803330... \n", + "18 1.2.826.0.1.3680043.8.498.10776604486330803330... \n", + "19 1.2.826.0.1.3680043.8.498.46954733820485882617... \n", + "20 1.2.826.0.1.3680043.8.498.46954733820485882617... \n", + "21 1.2.826.0.1.3680043.8.498.62009000468389411501... \n", + "22 1.2.826.0.1.3680043.8.498.62009000468389411501... \n", + "23 1.2.826.0.1.3680043.8.498.14811868708681134259... \n", + "24 1.2.826.0.1.3680043.8.498.14811868708681134259... " + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "# This code will run longer as you increase the number of ANN files to be processed\n", + "rois = get_roi_annotations(ann_to_process=10)\n", + "display(rois)" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "gpDVBwjYWz-w" + }, + "source": [ + "The following code cells define and use `get_cell_annotations()` to select all DICOM ANNs in the `BoneMarrowWSI-PediatricLeukemia` collection that contain cell annotations. By setting the parameter 'subset' to either 'labeled', 'unlabeled' or 'both', it's possible to extract either only labeled, unlabeled or all cell annotations.\n", + "The resulting pandas DataFrame contains\n", + "- **'SeriesInstanceUID'**: SeriesInstanceUID of the DICOM ANN Series containing the cell annotation\n", + "- **'annotation_session'**: 'n/a' for the unlabeled cells, otherwise the number of the annotation session or 'consensus' for the final consensus\n", + "- **'cell_id'**: the ID of the cell\n", + "- **'roi_id'**: if applicable, the ID of the monolayer ROI, that the cell is located within\n", + "- **'cell_human_label'**: Human-readable label of the cell\n", + "- **'cell_label_code_scheme'**: Tuple of code of the cell label and designator of the coding scheme used, e.g. (414387006, SCT) which is code 414387006 from SNOMED-CT\n", + "- **'cell_label'**: Code meaning of the cell label defined in cell_label_code_scheme e.g. 'Structure of haematological system'. Have a look at the [SNOMED Browser](https://browser.ihtsdotools.org/?perspective=full&conceptId1=414387006&edition=MAIN&release=&languages=en) for this example.\n", + "- **'cell_coordinates'**: the 2D coordinates in the image coordinate system of the referenced slide level\n", + "- **'reference_SeriesInstanceUID'** and **'reference_SOPInstanceUID'**: the SeriesInstanceUID and SOPInstanceUID of the slide level the annotations refer to. reference_SeriesInstanceUID can either be obtained from ann_index or read from the ANN file directly - for consistency with reference_SOPInstanceUID the later approach was chosen here." + ] + }, + { + "cell_type": "code", + "execution_count": 30, + "metadata": { + "id": "68Ljng4vEjGl" + }, + "outputs": [], + "source": [ + "def get_cell_annotations(subset: Union[str, None] = None, ann_to_process: int = 10) -> pd.DataFrame:\n", + " assert subset in ['labeled', 'unlabeled', None]\n", + "\n", + " if subset == 'unlabeled':\n", + " filter_condition = f'''\n", + " i.collection_id = 'bonemarrowwsi_pediatricleukemia'\n", + " AND ag.AnnotationPropertyType_CodeMeaning = 'Structure of haematological system'\n", + " AND ag.AnnotationGroupLabel = 'haematological_structure'\n", + " '''\n", + " elif subset == 'labeled':\n", + " filter_condition = f'''\n", + " i.collection_id = 'bonemarrowwsi_pediatricleukemia'\n", + " AND NOT (ag.AnnotationPropertyType_CodeMeaning = 'Structure of haematological system'\n", + " AND ag.AnnotationGroupLabel = 'haematological_structure')\n", + " '''\n", + " else:\n", + " filter_condition = '''i.collection_id = 'bonemarrowwsi_pediatricleukemia'''\n", + "\n", + " query_cell_anns = f'''\n", + " SELECT\n", + " ag.SeriesInstanceUID\n", + " FROM\n", + " ann_group_index ag\n", + " JOIN ann_index AS ai\n", + " ON ag.SeriesInstanceUID = ai.SeriesInstanceUID\n", + " JOIN index i\n", + " ON ag.SeriesInstanceUID = i.SeriesInstanceUID\n", + " WHERE\n", + " {filter_condition}\n", + " ORDER BY\n", + " ag.SeriesInstanceUID\n", + " LIMIT {ann_to_process}\n", + " '''\n", + " cell_series = idc_client.sql_query(query_cell_anns)['SeriesInstanceUID']\n", + " cells = extract_cells(cell_series)\n", + " return cells\n", + "\n", + "\n", + "def extract_cells(series_uids: List[str]) -> pd.DataFrame:\n", + " gcs_client = storage.Client.create_anonymous_client()\n", + " rows = []\n", + " for series_uid in series_uids:\n", + " file_urls = idc_client.get_series_file_URLs(seriesInstanceUID=series_uid, source_bucket_location='gcs')\n", + " for file_url in file_urls:\n", + " (_,_, bucket_name, folder_name, file_name) = file_url.split('/')\n", + " bucket = gcs_client.bucket(bucket_name)\n", + " blob = bucket.blob(f'{folder_name}/{file_name}')\n", + "\n", + " with blob.open('rb') as file_obj:\n", + " ann = hd.ann.annread(file_obj)\n", + " for ann_group in ann.get_annotation_groups():\n", + " coords = ann_group.get_graphic_data(coordinate_type='2D')\n", + " m_names, m_values, m_units = ann_group.get_measurements()\n", + " for c, m in zip(coords, m_values):\n", + " rows.append({\n", + " 'SeriesInstanceUID': ann.SeriesInstanceUID,\n", + " 'annotation_session': get_annotation_session(ann),\n", + " 'cell_id': int(m[0]),\n", + " 'roi_id': int(m[1]) if m.size > 1 else None, # allow empty roi_id,\n", + " 'cell_human_label': ann_group.label,\n", + " 'cell_label': ann_group.annotated_property_type.meaning,\n", + " 'cell_label_code_scheme': (ann_group.annotated_property_type.value, ann_group.annotated_property_type.scheme_designator),\n", + " 'cell_coordinates': c,\n", + " 'reference_SeriesInstanceUID': ann.ReferencedSeriesSequence[0].SeriesInstanceUID,\n", + " 'reference_SOPInstanceUID': ann.ReferencedImageSequence[0].ReferencedSOPInstanceUID\n", + " })\n", + " cells = pd.DataFrame(rows)\n", + " return cells\n", + "\n", + "\n", + "def get_annotation_session(ann: hd.ann.sop.MicroscopyBulkSimpleAnnotations) -> str:\n", + " if 'unlabeled' in ann.SeriesDescription.lower():\n", + " return 'n/a'\n", + " return ann.SeriesDescription.split(':')[0]" + ] + }, + { + "cell_type": "code", + "execution_count": 31, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 964 + }, + "id": "rWNAouye6DbO", + "outputId": "9099060f-dc49-41f4-e1f9-8d5209127a57" + }, + "outputs": [ + { + "data": { + "application/vnd.google.colaboratory.intrinsic+json": { + "summary": "{\n \"name\": \"unlabeled_cells\",\n \"rows\": 2057,\n \"fields\": [\n {\n \"column\": \"SeriesInstanceUID\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 10,\n \"samples\": [\n \"1.2.826.0.1.3680043.10.511.3.20427304845722401386871847639397066\",\n \"1.2.826.0.1.3680043.10.511.3.10504382767695804294938309534128302\",\n \"1.2.826.0.1.3680043.10.511.3.13757721544687056749397111118854985\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"annotation_session\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 1,\n \"samples\": [\n \"n/a\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"cell_id\",\n \"properties\": {\n \"dtype\": \"number\",\n \"std\": 4811,\n \"min\": 100269,\n \"max\": 114802,\n \"num_unique_values\": 2057,\n \"samples\": [\n 114702\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"roi_id\",\n \"properties\": {\n \"dtype\": \"number\",\n \"std\": 55,\n \"min\": 1004,\n \"max\": 1175,\n \"num_unique_values\": 20,\n \"samples\": [\n 1174\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"cell_human_label\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 1,\n \"samples\": [\n \"haematological_structure\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"cell_label\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 1,\n \"samples\": [\n \"Structure of haematological system\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"cell_label_code_scheme\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 1,\n \"samples\": [\n [\n \"414387006\",\n \"SCT\"\n ]\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"cell_coordinates\",\n \"properties\": {\n \"dtype\": \"object\",\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"reference_SeriesInstanceUID\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 10,\n \"samples\": [\n \"1.2.826.0.1.3680043.8.498.27899449997765915102352296752924612518\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"reference_SOPInstanceUID\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 10,\n \"samples\": [\n \"1.2.826.0.1.3680043.8.498.66712731760366043239532175530990313645\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n }\n ]\n}", + "type": "dataframe", + "variable_name": "unlabeled_cells" + }, + "text/html": [ + "\n", + "
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11.2.826.0.1.3680043.10.511.3.10323924147988442...n/a1145191174haematological_structureStructure of haematological system(414387006, SCT)[[91986.0, 215538.0], [92127.0, 215538.0], [92...1.2.826.0.1.3680043.8.498.79371179824920998262...1.2.826.0.1.3680043.8.498.81643514503975082734...
21.2.826.0.1.3680043.10.511.3.10323924147988442...n/a1145201174haematological_structureStructure of haematological system(414387006, SCT)[[92103.0, 215517.0], [92199.0, 215517.0], [92...1.2.826.0.1.3680043.8.498.79371179824920998262...1.2.826.0.1.3680043.8.498.81643514503975082734...
31.2.826.0.1.3680043.10.511.3.10323924147988442...n/a1145211174haematological_structureStructure of haematological system(414387006, SCT)[[92451.0, 215285.0], [92557.0, 215285.0], [92...1.2.826.0.1.3680043.8.498.79371179824920998262...1.2.826.0.1.3680043.8.498.81643514503975082734...
41.2.826.0.1.3680043.10.511.3.10323924147988442...n/a1145221174haematological_structureStructure of haematological system(414387006, SCT)[[92709.0, 215442.0], [92813.0, 215442.0], [92...1.2.826.0.1.3680043.8.498.79371179824920998262...1.2.826.0.1.3680043.8.498.81643514503975082734...
.................................
20521.2.826.0.1.3680043.10.511.3.20449813712117001...n/a1075231097haematological_structureStructure of haematological system(414387006, SCT)[[100110.0, 263966.0], [100302.0, 263966.0], [...1.2.826.0.1.3680043.8.498.31088998307342714143...1.2.826.0.1.3680043.8.498.98991581155690605814...
20531.2.826.0.1.3680043.10.511.3.20449813712117001...n/a1075241097haematological_structureStructure of haematological system(414387006, SCT)[[100814.0, 263911.0], [100991.0, 263911.0], [...1.2.826.0.1.3680043.8.498.31088998307342714143...1.2.826.0.1.3680043.8.498.98991581155690605814...
20541.2.826.0.1.3680043.10.511.3.20449813712117001...n/a1075251097haematological_structureStructure of haematological system(414387006, SCT)[[100782.0, 264035.0], [100938.0, 264035.0], [...1.2.826.0.1.3680043.8.498.31088998307342714143...1.2.826.0.1.3680043.8.498.98991581155690605814...
20551.2.826.0.1.3680043.10.511.3.20449813712117001...n/a1075261097haematological_structureStructure of haematological system(414387006, SCT)[[100683.0, 263013.0], [100858.0, 263013.0], [...1.2.826.0.1.3680043.8.498.31088998307342714143...1.2.826.0.1.3680043.8.498.98991581155690605814...
20561.2.826.0.1.3680043.10.511.3.20449813712117001...n/a1075271097haematological_structureStructure of haematological system(414387006, SCT)[[100700.0, 262878.0], [100847.0, 262878.0], [...1.2.826.0.1.3680043.8.498.31088998307342714143...1.2.826.0.1.3680043.8.498.98991581155690605814...
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1174 haematological_structure \n", + "... ... ... ... \n", + "2052 107523 1097 haematological_structure \n", + "2053 107524 1097 haematological_structure \n", + "2054 107525 1097 haematological_structure \n", + "2055 107526 1097 haematological_structure \n", + "2056 107527 1097 haematological_structure \n", + "\n", + " cell_label cell_label_code_scheme \\\n", + "0 Structure of haematological system (414387006, SCT) \n", + "1 Structure of haematological system (414387006, SCT) \n", + "2 Structure of haematological system (414387006, SCT) \n", + "3 Structure of haematological system (414387006, SCT) \n", + "4 Structure of haematological system (414387006, SCT) \n", + "... ... ... \n", + "2052 Structure of haematological system (414387006, SCT) \n", + "2053 Structure of haematological system (414387006, SCT) \n", + "2054 Structure of haematological system (414387006, SCT) \n", + "2055 Structure of haematological system (414387006, SCT) \n", + "2056 Structure of haematological system 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SeriesInstanceUIDannotation_sessioncell_idroi_idcell_human_labelcell_labelcell_label_code_schemecell_coordinatesreference_SeriesInstanceUIDreference_SOPInstanceUID
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231009227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84698. 77060.]\n", + " [84825. 77060.]\n", + " [84825. 77171.]\n", + " [84698. 77171.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231009227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84698. 77060.]\n", + " [84825. 77060.]\n", + " [84825. 77171.]\n", + " [84698. 77171.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231009227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84698. 77060.]\n", + " [84825. 77060.]\n", + " [84825. 77171.]\n", + " [84698. 77171.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231009227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84698. 77060.]\n", + " [84825. 77060.]\n", + " [84825. 77171.]\n", + " [84698. 77171.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231009227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84698. 77060.]\n", + " [84825. 77060.]\n", + " [84825. 77171.]\n", + " [84698. 77171.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227unknown_blastBlast cell('312256009', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227unknown_blastBlast cell('312256009', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227unknown_blastBlast cell('312256009', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227unknown_blastBlast cell('312256009', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231020227unknown_blastBlast cell('312256009', 'SCT')[[85184. 77287.]\n", + " [85337. 77287.]\n", + " [85337. 77452.]\n", + " [85184. 77452.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231026227smudge_cellSmudge cell('34717007', 'SCT')[[85542. 77097.]\n", + " [85669. 77097.]\n", + " [85669. 77243.]\n", + " [85542. 77243.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231026227smudge_cellSmudge cell('34717007', 'SCT')[[85542. 77097.]\n", + " [85669. 77097.]\n", + " [85669. 77243.]\n", + " [85542. 77243.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231026227smudge_cellSmudge cell('34717007', 'SCT')[[85542. 77097.]\n", + " [85669. 77097.]\n", + " [85669. 77243.]\n", + " [85542. 77243.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231026227smudge_cellSmudge cell('34717007', 'SCT')[[85542. 77097.]\n", + " [85669. 77097.]\n", + " [85669. 77243.]\n", + " [85542. 77243.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231026227smudge_cellSmudge cell('34717007', 'SCT')[[85542. 77097.]\n", + " [85669. 77097.]\n", + " [85669. 77243.]\n", + " [85542. 77243.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231027227damaged_cellDamage('37782003', 'SCT')[[85703. 76929.]\n", + " [85816. 76929.]\n", + " [85816. 77047.]\n", + " [85703. 77047.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231027227damaged_cellDamage('37782003', 'SCT')[[85703. 76929.]\n", + " [85816. 76929.]\n", + " [85816. 77047.]\n", + " [85703. 77047.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231027227damaged_cellDamage('37782003', 'SCT')[[85703. 76929.]\n", + " [85816. 76929.]\n", + " [85816. 77047.]\n", + " [85703. 77047.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231027227damaged_cellDamage('37782003', 'SCT')[[85703. 76929.]\n", + " [85816. 76929.]\n", + " [85816. 77047.]\n", + " [85703. 77047.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231027227damaged_cellDamage('37782003', 'SCT')[[85703. 76929.]\n", + " [85816. 76929.]\n", + " [85816. 77047.]\n", + " [85703. 77047.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231030227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85136. 77970.]\n", + " [85265. 77970.]\n", + " [85265. 78098.]\n", + " [85136. 78098.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231030227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85136. 77970.]\n", + " [85265. 77970.]\n", + " [85265. 78098.]\n", + " [85136. 78098.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231030227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85136. 77970.]\n", + " [85265. 77970.]\n", + " [85265. 78098.]\n", + " [85136. 78098.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231030227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85136. 77970.]\n", + " [85265. 77970.]\n", + " [85265. 78098.]\n", + " [85136. 78098.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231030227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85136. 77970.]\n", + " [85265. 77970.]\n", + " [85265. 78098.]\n", + " [85136. 78098.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231052227smudge_cellSmudge cell('34717007', 'SCT')[[85286. 78682.]\n", + " [85425. 78682.]\n", + " [85425. 78796.]\n", + " [85286. 78796.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231052227smudge_cellSmudge cell('34717007', 'SCT')[[85286. 78682.]\n", + " [85425. 78682.]\n", + " [85425. 78796.]\n", + " [85286. 78796.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231052227smudge_cellSmudge cell('34717007', 'SCT')[[85286. 78682.]\n", + " [85425. 78682.]\n", + " [85425. 78796.]\n", + " [85286. 78796.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231052227smudge_cellSmudge cell('34717007', 'SCT')[[85286. 78682.]\n", + " [85425. 78682.]\n", + " [85425. 78796.]\n", + " [85286. 78796.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231052227smudge_cellSmudge cell('34717007', 'SCT')[[85286. 78682.]\n", + " [85425. 78682.]\n", + " [85425. 78796.]\n", + " [85286. 78796.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231058227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86414. 77155.]\n", + " [86518. 77155.]\n", + " [86518. 77253.]\n", + " [86414. 77253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231058227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86414. 77155.]\n", + " [86518. 77155.]\n", + " [86518. 77253.]\n", + " [86414. 77253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231058227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86414. 77155.]\n", + " [86518. 77155.]\n", + " [86518. 77253.]\n", + " [86414. 77253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231058227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86414. 77155.]\n", + " [86518. 77155.]\n", + " [86518. 77253.]\n", + " [86414. 77253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231058227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86414. 77155.]\n", + " [86518. 77155.]\n", + " [86518. 77253.]\n", + " [86414. 77253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231064227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85928. 78432.]\n", + " [86025. 78432.]\n", + " [86025. 78545.]\n", + " [85928. 78545.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231064227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85928. 78432.]\n", + " [86025. 78432.]\n", + " [86025. 78545.]\n", + " [85928. 78545.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231064227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85928. 78432.]\n", + " [86025. 78432.]\n", + " [86025. 78545.]\n", + " [85928. 78545.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231064227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85928. 78432.]\n", + " [86025. 78432.]\n", + " [86025. 78545.]\n", + " [85928. 78545.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231064227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85928. 78432.]\n", + " [86025. 78432.]\n", + " [86025. 78545.]\n", + " [85928. 78545.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231069227smudge_cellSmudge cell('34717007', 'SCT')[[86045. 78653.]\n", + " [86136. 78653.]\n", + " [86136. 78753.]\n", + " [86045. 78753.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231069227smudge_cellSmudge cell('34717007', 'SCT')[[86045. 78653.]\n", + " [86136. 78653.]\n", + " [86136. 78753.]\n", + " [86045. 78753.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231069227smudge_cellSmudge cell('34717007', 'SCT')[[86045. 78653.]\n", + " [86136. 78653.]\n", + " [86136. 78753.]\n", + " [86045. 78753.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231069227smudge_cellSmudge cell('34717007', 'SCT')[[86045. 78653.]\n", + " [86136. 78653.]\n", + " [86136. 78753.]\n", + " [86045. 78753.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231069227smudge_cellSmudge cell('34717007', 'SCT')[[86045. 78653.]\n", + " [86136. 78653.]\n", + " [86136. 78753.]\n", + " [86045. 78753.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231076227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85158. 79014.]\n", + " [85286. 79014.]\n", + " [85286. 79146.]\n", + " [85158. 79146.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231076227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85158. 79014.]\n", + " [85286. 79014.]\n", + " [85286. 79146.]\n", + " [85158. 79146.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231076227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85158. 79014.]\n", + " [85286. 79014.]\n", + " [85286. 79146.]\n", + " [85158. 79146.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231076227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85158. 79014.]\n", + " [85286. 79014.]\n", + " [85286. 79146.]\n", + " [85158. 79146.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231076227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85158. 79014.]\n", + " [85286. 79014.]\n", + " [85286. 79146.]\n", + " [85158. 79146.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231078227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85202. 78844.]\n", + " [85310. 78844.]\n", + " [85310. 78959.]\n", + " [85202. 78959.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231078227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85202. 78844.]\n", + " [85310. 78844.]\n", + " [85310. 78959.]\n", + " [85202. 78959.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231078227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85202. 78844.]\n", + " [85310. 78844.]\n", + " [85310. 78959.]\n", + " [85202. 78959.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231078227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85202. 78844.]\n", + " [85310. 78844.]\n", + " [85310. 78959.]\n", + " [85202. 78959.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231078227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85202. 78844.]\n", + " [85310. 78844.]\n", + " [85310. 78959.]\n", + " [85202. 78959.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231089227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86134. 77551.]\n", + " [86262. 77551.]\n", + " [86262. 77688.]\n", + " [86134. 77688.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231089227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86134. 77551.]\n", + " [86262. 77551.]\n", + " [86262. 77688.]\n", + " [86134. 77688.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231089227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86134. 77551.]\n", + " [86262. 77551.]\n", + " [86262. 77688.]\n", + " [86134. 77688.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231089227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86134. 77551.]\n", + " [86262. 77551.]\n", + " [86262. 77688.]\n", + " [86134. 77688.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231089227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[86134. 77551.]\n", + " [86262. 77551.]\n", + " [86262. 77688.]\n", + " [86134. 77688.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231093227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85858. 77578.]\n", + " [85968. 77578.]\n", + " [85968. 77685.]\n", + " [85858. 77685.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231093227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85858. 77578.]\n", + " [85968. 77578.]\n", + " [85968. 77685.]\n", + " [85858. 77685.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231093227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85858. 77578.]\n", + " [85968. 77578.]\n", + " [85968. 77685.]\n", + " [85858. 77685.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231093227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85858. 77578.]\n", + " [85968. 77578.]\n", + " [85968. 77685.]\n", + " [85858. 77685.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231093227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85858. 77578.]\n", + " [85968. 77578.]\n", + " [85968. 77685.]\n", + " [85858. 77685.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231097227lymphocytic_blastLymphoblast('15433008', 'SCT')[[86013. 77636.]\n", + " [86110. 77636.]\n", + " [86110. 77735.]\n", + " [86013. 77735.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231097227lymphocytic_blastLymphoblast('15433008', 'SCT')[[86013. 77636.]\n", + " [86110. 77636.]\n", + " [86110. 77735.]\n", + " [86013. 77735.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231097227lymphocytic_blastLymphoblast('15433008', 'SCT')[[86013. 77636.]\n", + " [86110. 77636.]\n", + " [86110. 77735.]\n", + " [86013. 77735.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231097227lymphocytic_blastLymphoblast('15433008', 'SCT')[[86013. 77636.]\n", + " [86110. 77636.]\n", + " [86110. 77735.]\n", + " [86013. 77735.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231097227lymphocytic_blastLymphoblast('15433008', 'SCT')[[86013. 77636.]\n", + " [86110. 77636.]\n", + " [86110. 77735.]\n", + " [86013. 77735.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231101227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85300. 78846.]\n", + " [85384. 78846.]\n", + " [85384. 78951.]\n", + " [85300. 78951.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231101227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85300. 78846.]\n", + " [85384. 78846.]\n", + " [85384. 78951.]\n", + " [85300. 78951.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231101227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85300. 78846.]\n", + " [85384. 78846.]\n", + " [85384. 78951.]\n", + " [85300. 78951.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231101227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85300. 78846.]\n", + " [85384. 78846.]\n", + " [85384. 78951.]\n", + " [85300. 78951.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231101227lymphocytic_blastLymphoblast('15433008', 'SCT')[[85300. 78846.]\n", + " [85384. 78846.]\n", + " [85384. 78951.]\n", + " [85300. 78951.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231105227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85329. 78901.]\n", + " [85440. 78901.]\n", + " [85440. 79105.]\n", + " [85329. 79105.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231105227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85329. 78901.]\n", + " [85440. 78901.]\n", + " [85440. 79105.]\n", + " [85329. 79105.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231105227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85329. 78901.]\n", + " [85440. 78901.]\n", + " [85440. 79105.]\n", + " [85329. 79105.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231105227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85329. 78901.]\n", + " [85440. 78901.]\n", + " [85440. 79105.]\n", + " [85329. 79105.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231105227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[85329. 78901.]\n", + " [85440. 78901.]\n", + " [85440. 79105.]\n", + " [85329. 79105.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231108227smudge_cellSmudge cell('34717007', 'SCT')[[84448. 77229.]\n", + " [84571. 77229.]\n", + " [84571. 77348.]\n", + " [84448. 77348.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231108227smudge_cellSmudge cell('34717007', 'SCT')[[84448. 77229.]\n", + " [84571. 77229.]\n", + " [84571. 77348.]\n", + " [84448. 77348.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231108227smudge_cellSmudge cell('34717007', 'SCT')[[84448. 77229.]\n", + " [84571. 77229.]\n", + " [84571. 77348.]\n", + " [84448. 77348.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231108227smudge_cellSmudge cell('34717007', 'SCT')[[84448. 77229.]\n", + " [84571. 77229.]\n", + " [84571. 77348.]\n", + " [84448. 77348.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231108227smudge_cellSmudge cell('34717007', 'SCT')[[84448. 77229.]\n", + " [84571. 77229.]\n", + " [84571. 77348.]\n", + " [84448. 77348.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231112227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[84774. 78130.]\n", + " [84898. 78130.]\n", + " [84898. 78241.]\n", + " [84774. 78241.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231112227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[84774. 78130.]\n", + " [84898. 78130.]\n", + " [84898. 78241.]\n", + " [84774. 78241.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231112227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[84774. 78130.]\n", + " [84898. 78130.]\n", + " [84898. 78241.]\n", + " [84774. 78241.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231112227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[84774. 78130.]\n", + " [84898. 78130.]\n", + " [84898. 78241.]\n", + " [84774. 78241.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231112227no_consensus_foundStructure of haematological system('414387006', 'SCT')[[84774. 78130.]\n", + " [84898. 78130.]\n", + " [84898. 78241.]\n", + " [84774. 78241.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231113227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84803. 78269.]\n", + " [84950. 78269.]\n", + " [84950. 78406.]\n", + " [84803. 78406.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231113227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84803. 78269.]\n", + " [84950. 78269.]\n", + " [84950. 78406.]\n", + " [84803. 78406.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231113227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84803. 78269.]\n", + " [84950. 78269.]\n", + " [84950. 78406.]\n", + " [84803. 78406.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231113227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84803. 78269.]\n", + " [84950. 78269.]\n", + " [84950. 78406.]\n", + " [84803. 78406.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231113227lymphocytic_blastLymphoblast('15433008', 'SCT')[[84803. 78269.]\n", + " [84950. 78269.]\n", + " [84950. 78406.]\n", + " [84803. 78406.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231139228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87521. 103435.]\n", + " [ 87632. 103435.]\n", + " [ 87632. 103543.]\n", + " [ 87521. 103543.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231139228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87521. 103435.]\n", + " [ 87632. 103435.]\n", + " [ 87632. 103543.]\n", + " [ 87521. 103543.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231139228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87521. 103435.]\n", + " [ 87632. 103435.]\n", + " [ 87632. 103543.]\n", + " [ 87521. 103543.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231139228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87521. 103435.]\n", + " [ 87632. 103435.]\n", + " [ 87632. 103543.]\n", + " [ 87521. 103543.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231139228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87521. 103435.]\n", + " [ 87632. 103435.]\n", + " [ 87632. 103543.]\n", + " [ 87521. 103543.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231140228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87942. 102956.]\n", + " [ 88065. 102956.]\n", + " [ 88065. 103078.]\n", + " [ 87942. 103078.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231140228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87942. 102956.]\n", + " [ 88065. 102956.]\n", + " [ 88065. 103078.]\n", + " [ 87942. 103078.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231140228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87942. 102956.]\n", + " [ 88065. 102956.]\n", + " [ 88065. 103078.]\n", + " [ 87942. 103078.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231140228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87942. 102956.]\n", + " [ 88065. 102956.]\n", + " [ 88065. 103078.]\n", + " [ 87942. 103078.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231140228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87942. 102956.]\n", + " [ 88065. 102956.]\n", + " [ 88065. 103078.]\n", + " [ 87942. 103078.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231144228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88028. 103012.]\n", + " [ 88129. 103012.]\n", + " [ 88129. 103112.]\n", + " [ 88028. 103112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231144228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88028. 103012.]\n", + " [ 88129. 103012.]\n", + " [ 88129. 103112.]\n", + " [ 88028. 103112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231144228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88028. 103012.]\n", + " [ 88129. 103012.]\n", + " [ 88129. 103112.]\n", + " [ 88028. 103112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231144228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88028. 103012.]\n", + " [ 88129. 103012.]\n", + " [ 88129. 103112.]\n", + " [ 88028. 103112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231144228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88028. 103012.]\n", + " [ 88129. 103012.]\n", + " [ 88129. 103112.]\n", + " [ 88028. 103112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231145228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88116. 103041.]\n", + " [ 88213. 103041.]\n", + " [ 88213. 103139.]\n", + " [ 88116. 103139.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231145228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88116. 103041.]\n", + " [ 88213. 103041.]\n", + " [ 88213. 103139.]\n", + " [ 88116. 103139.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231145228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88116. 103041.]\n", + " [ 88213. 103041.]\n", + " [ 88213. 103139.]\n", + " [ 88116. 103139.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231145228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88116. 103041.]\n", + " [ 88213. 103041.]\n", + " [ 88213. 103139.]\n", + " [ 88116. 103139.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231145228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88116. 103041.]\n", + " [ 88213. 103041.]\n", + " [ 88213. 103139.]\n", + " [ 88116. 103139.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231163228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88744. 102675.]\n", + " [ 88849. 102675.]\n", + " [ 88849. 102804.]\n", + " [ 88744. 102804.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231163228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88744. 102675.]\n", + " [ 88849. 102675.]\n", + " [ 88849. 102804.]\n", + " [ 88744. 102804.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231163228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88744. 102675.]\n", + " [ 88849. 102675.]\n", + " [ 88849. 102804.]\n", + " [ 88744. 102804.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231163228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88744. 102675.]\n", + " [ 88849. 102675.]\n", + " [ 88849. 102804.]\n", + " [ 88744. 102804.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231163228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88744. 102675.]\n", + " [ 88849. 102675.]\n", + " [ 88849. 102804.]\n", + " [ 88744. 102804.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231165228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 88347. 103131.]\n", + " [ 88436. 103131.]\n", + " [ 88436. 103226.]\n", + " [ 88347. 103226.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231165228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 88347. 103131.]\n", + " [ 88436. 103131.]\n", + " [ 88436. 103226.]\n", + " [ 88347. 103226.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231165228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 88347. 103131.]\n", + " [ 88436. 103131.]\n", + " [ 88436. 103226.]\n", + " [ 88347. 103226.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231165228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 88347. 103131.]\n", + " [ 88436. 103131.]\n", + " [ 88436. 103226.]\n", + " [ 88347. 103226.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231165228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 88347. 103131.]\n", + " [ 88436. 103131.]\n", + " [ 88436. 103226.]\n", + " [ 88347. 103226.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231169228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88065. 103350.]\n", + " [ 88158. 103350.]\n", + " [ 88158. 103441.]\n", + " [ 88065. 103441.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231169228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88065. 103350.]\n", + " [ 88158. 103350.]\n", + " [ 88158. 103441.]\n", + " [ 88065. 103441.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231169228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88065. 103350.]\n", + " [ 88158. 103350.]\n", + " [ 88158. 103441.]\n", + " [ 88065. 103441.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231169228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88065. 103350.]\n", + " [ 88158. 103350.]\n", + " [ 88158. 103441.]\n", + " [ 88065. 103441.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231169228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88065. 103350.]\n", + " [ 88158. 103350.]\n", + " [ 88158. 103441.]\n", + " [ 88065. 103441.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231182228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88680. 103427.]\n", + " [ 88768. 103427.]\n", + " [ 88768. 103527.]\n", + " [ 88680. 103527.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231182228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88680. 103427.]\n", + " [ 88768. 103427.]\n", + " [ 88768. 103527.]\n", + " [ 88680. 103527.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231182228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88680. 103427.]\n", + " [ 88768. 103427.]\n", + " [ 88768. 103527.]\n", + " [ 88680. 103527.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231182228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88680. 103427.]\n", + " [ 88768. 103427.]\n", + " [ 88768. 103527.]\n", + " [ 88680. 103527.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231182228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88680. 103427.]\n", + " [ 88768. 103427.]\n", + " [ 88768. 103527.]\n", + " [ 88680. 103527.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231183228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88766. 103388.]\n", + " [ 88874. 103388.]\n", + " [ 88874. 103504.]\n", + " [ 88766. 103504.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231183228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88766. 103388.]\n", + " [ 88874. 103388.]\n", + " [ 88874. 103504.]\n", + " [ 88766. 103504.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231183228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88766. 103388.]\n", + " [ 88874. 103388.]\n", + " [ 88874. 103504.]\n", + " [ 88766. 103504.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231183228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88766. 103388.]\n", + " [ 88874. 103388.]\n", + " [ 88874. 103504.]\n", + " [ 88766. 103504.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231183228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88766. 103388.]\n", + " [ 88874. 103388.]\n", + " [ 88874. 103504.]\n", + " [ 88766. 103504.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231197228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88628. 103720.]\n", + " [ 88716. 103720.]\n", + " [ 88716. 103809.]\n", + " [ 88628. 103809.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231197228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88628. 103720.]\n", + " [ 88716. 103720.]\n", + " [ 88716. 103809.]\n", + " [ 88628. 103809.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231197228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88628. 103720.]\n", + " [ 88716. 103720.]\n", + " [ 88716. 103809.]\n", + " [ 88628. 103809.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231197228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88628. 103720.]\n", + " [ 88716. 103720.]\n", + " [ 88716. 103809.]\n", + " [ 88628. 103809.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231197228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88628. 103720.]\n", + " [ 88716. 103720.]\n", + " [ 88716. 103809.]\n", + " [ 88628. 103809.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231198228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88786. 103723.]\n", + " [ 88880. 103723.]\n", + " [ 88880. 103805.]\n", + " [ 88786. 103805.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231198228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88786. 103723.]\n", + " [ 88880. 103723.]\n", + " [ 88880. 103805.]\n", + " [ 88786. 103805.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231198228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88786. 103723.]\n", + " [ 88880. 103723.]\n", + " [ 88880. 103805.]\n", + " [ 88786. 103805.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231198228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88786. 103723.]\n", + " [ 88880. 103723.]\n", + " [ 88880. 103805.]\n", + " [ 88786. 103805.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231198228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88786. 103723.]\n", + " [ 88880. 103723.]\n", + " [ 88880. 103805.]\n", + " [ 88786. 103805.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231216228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88736. 104161.]\n", + " [ 88818. 104161.]\n", + " [ 88818. 104245.]\n", + " [ 88736. 104245.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231216228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88736. 104161.]\n", + " [ 88818. 104161.]\n", + " [ 88818. 104245.]\n", + " [ 88736. 104245.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231216228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88736. 104161.]\n", + " [ 88818. 104161.]\n", + " [ 88818. 104245.]\n", + " [ 88736. 104245.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231216228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88736. 104161.]\n", + " [ 88818. 104161.]\n", + " [ 88818. 104245.]\n", + " [ 88736. 104245.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231216228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88736. 104161.]\n", + " [ 88818. 104161.]\n", + " [ 88818. 104245.]\n", + " [ 88736. 104245.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231224228smudge_cellSmudge cell('34717007', 'SCT')[[ 88964. 104415.]\n", + " [ 89071. 104415.]\n", + " [ 89071. 104495.]\n", + " [ 88964. 104495.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231224228smudge_cellSmudge cell('34717007', 'SCT')[[ 88964. 104415.]\n", + " [ 89071. 104415.]\n", + " [ 89071. 104495.]\n", + " [ 88964. 104495.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231224228smudge_cellSmudge cell('34717007', 'SCT')[[ 88964. 104415.]\n", + " [ 89071. 104415.]\n", + " [ 89071. 104495.]\n", + " [ 88964. 104495.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231224228smudge_cellSmudge cell('34717007', 'SCT')[[ 88964. 104415.]\n", + " [ 89071. 104415.]\n", + " [ 89071. 104495.]\n", + " [ 88964. 104495.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231224228smudge_cellSmudge cell('34717007', 'SCT')[[ 88964. 104415.]\n", + " [ 89071. 104415.]\n", + " [ 89071. 104495.]\n", + " [ 88964. 104495.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231237228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88631. 104775.]\n", + " [ 88745. 104775.]\n", + " [ 88745. 104880.]\n", + " [ 88631. 104880.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231237228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88631. 104775.]\n", + " [ 88745. 104775.]\n", + " [ 88745. 104880.]\n", + " [ 88631. 104880.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231237228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88631. 104775.]\n", + " [ 88745. 104775.]\n", + " [ 88745. 104880.]\n", + " [ 88631. 104880.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231237228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88631. 104775.]\n", + " [ 88745. 104775.]\n", + " [ 88745. 104880.]\n", + " [ 88631. 104880.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231237228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88631. 104775.]\n", + " [ 88745. 104775.]\n", + " [ 88745. 104880.]\n", + " [ 88631. 104880.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231240228smudge_cellSmudge cell('34717007', 'SCT')[[ 88500. 104672.]\n", + " [ 88588. 104672.]\n", + " [ 88588. 104800.]\n", + " [ 88500. 104800.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231240228smudge_cellSmudge cell('34717007', 'SCT')[[ 88500. 104672.]\n", + " [ 88588. 104672.]\n", + " [ 88588. 104800.]\n", + " [ 88500. 104800.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231240228smudge_cellSmudge cell('34717007', 'SCT')[[ 88500. 104672.]\n", + " [ 88588. 104672.]\n", + " [ 88588. 104800.]\n", + " [ 88500. 104800.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231240228smudge_cellSmudge cell('34717007', 'SCT')[[ 88500. 104672.]\n", + " [ 88588. 104672.]\n", + " [ 88588. 104800.]\n", + " [ 88500. 104800.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231240228smudge_cellSmudge cell('34717007', 'SCT')[[ 88500. 104672.]\n", + " [ 88588. 104672.]\n", + " [ 88588. 104800.]\n", + " [ 88500. 104800.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231241228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88423. 104725.]\n", + " [ 88541. 104725.]\n", + " [ 88541. 104846.]\n", + " [ 88423. 104846.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231241228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88423. 104725.]\n", + " [ 88541. 104725.]\n", + " [ 88541. 104846.]\n", + " [ 88423. 104846.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231241228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88423. 104725.]\n", + " [ 88541. 104725.]\n", + " [ 88541. 104846.]\n", + " [ 88423. 104846.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231241228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88423. 104725.]\n", + " [ 88541. 104725.]\n", + " [ 88541. 104846.]\n", + " [ 88423. 104846.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231241228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88423. 104725.]\n", + " [ 88541. 104725.]\n", + " [ 88541. 104846.]\n", + " [ 88423. 104846.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231248228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88531. 104302.]\n", + " [ 88626. 104302.]\n", + " [ 88626. 104389.]\n", + " [ 88531. 104389.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231248228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88531. 104302.]\n", + " [ 88626. 104302.]\n", + " [ 88626. 104389.]\n", + " [ 88531. 104389.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231248228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88531. 104302.]\n", + " [ 88626. 104302.]\n", + " [ 88626. 104389.]\n", + " [ 88531. 104389.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231248228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88531. 104302.]\n", + " [ 88626. 104302.]\n", + " [ 88626. 104389.]\n", + " [ 88531. 104389.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231248228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 88531. 104302.]\n", + " [ 88626. 104302.]\n", + " [ 88626. 104389.]\n", + " [ 88531. 104389.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231258228smudge_cellSmudge cell('34717007', 'SCT')[[ 88335. 103994.]\n", + " [ 88456. 103994.]\n", + " [ 88456. 104112.]\n", + " [ 88335. 104112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231258228smudge_cellSmudge cell('34717007', 'SCT')[[ 88335. 103994.]\n", + " [ 88456. 103994.]\n", + " [ 88456. 104112.]\n", + " [ 88335. 104112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231258228smudge_cellSmudge cell('34717007', 'SCT')[[ 88335. 103994.]\n", + " [ 88456. 103994.]\n", + " [ 88456. 104112.]\n", + " [ 88335. 104112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231258228smudge_cellSmudge cell('34717007', 'SCT')[[ 88335. 103994.]\n", + " [ 88456. 103994.]\n", + " [ 88456. 104112.]\n", + " [ 88335. 104112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231258228smudge_cellSmudge cell('34717007', 'SCT')[[ 88335. 103994.]\n", + " [ 88456. 103994.]\n", + " [ 88456. 104112.]\n", + " [ 88335. 104112.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231260228damaged_cellDamage('37782003', 'SCT')[[ 87636. 104781.]\n", + " [ 87753. 104781.]\n", + " [ 87753. 104966.]\n", + " [ 87636. 104966.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231260228damaged_cellDamage('37782003', 'SCT')[[ 87636. 104781.]\n", + " [ 87753. 104781.]\n", + " [ 87753. 104966.]\n", + " [ 87636. 104966.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231260228damaged_cellDamage('37782003', 'SCT')[[ 87636. 104781.]\n", + " [ 87753. 104781.]\n", + " [ 87753. 104966.]\n", + " [ 87636. 104966.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231260228damaged_cellDamage('37782003', 'SCT')[[ 87636. 104781.]\n", + " [ 87753. 104781.]\n", + " [ 87753. 104966.]\n", + " [ 87636. 104966.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231260228damaged_cellDamage('37782003', 'SCT')[[ 87636. 104781.]\n", + " [ 87753. 104781.]\n", + " [ 87753. 104966.]\n", + " [ 87636. 104966.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231269228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87775. 104109.]\n", + " [ 87926. 104109.]\n", + " [ 87926. 104253.]\n", + " [ 87775. 104253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231269228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87775. 104109.]\n", + " [ 87926. 104109.]\n", + " [ 87926. 104253.]\n", + " [ 87775. 104253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231269228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87775. 104109.]\n", + " [ 87926. 104109.]\n", + " [ 87926. 104253.]\n", + " [ 87775. 104253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231269228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87775. 104109.]\n", + " [ 87926. 104109.]\n", + " [ 87926. 104253.]\n", + " [ 87775. 104253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231269228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87775. 104109.]\n", + " [ 87926. 104109.]\n", + " [ 87926. 104253.]\n", + " [ 87775. 104253.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231279228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87206. 103804.]\n", + " [ 87302. 103804.]\n", + " [ 87302. 103937.]\n", + " [ 87206. 103937.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231279228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87206. 103804.]\n", + " [ 87302. 103804.]\n", + " [ 87302. 103937.]\n", + " [ 87206. 103937.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231279228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87206. 103804.]\n", + " [ 87302. 103804.]\n", + " [ 87302. 103937.]\n", + " [ 87206. 103937.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231279228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87206. 103804.]\n", + " [ 87302. 103804.]\n", + " [ 87302. 103937.]\n", + " [ 87206. 103937.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231279228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87206. 103804.]\n", + " [ 87302. 103804.]\n", + " [ 87302. 103937.]\n", + " [ 87206. 103937.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231282228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87357. 103704.]\n", + " [ 87449. 103704.]\n", + " [ 87449. 103789.]\n", + " [ 87357. 103789.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231282228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87357. 103704.]\n", + " [ 87449. 103704.]\n", + " [ 87449. 103789.]\n", + " [ 87357. 103789.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231282228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87357. 103704.]\n", + " [ 87449. 103704.]\n", + " [ 87449. 103789.]\n", + " [ 87357. 103789.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231282228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87357. 103704.]\n", + " [ 87449. 103704.]\n", + " [ 87449. 103789.]\n", + " [ 87357. 103789.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231282228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87357. 103704.]\n", + " [ 87449. 103704.]\n", + " [ 87449. 103789.]\n", + " [ 87357. 103789.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231283228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87056. 103354.]\n", + " [ 87163. 103354.]\n", + " [ 87163. 103459.]\n", + " [ 87056. 103459.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231283228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87056. 103354.]\n", + " [ 87163. 103354.]\n", + " [ 87163. 103459.]\n", + " [ 87056. 103459.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231283228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87056. 103354.]\n", + " [ 87163. 103354.]\n", + " [ 87163. 103459.]\n", + " [ 87056. 103459.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231283228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87056. 103354.]\n", + " [ 87163. 103354.]\n", + " [ 87163. 103459.]\n", + " [ 87056. 103459.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231283228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87056. 103354.]\n", + " [ 87163. 103354.]\n", + " [ 87163. 103459.]\n", + " [ 87056. 103459.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231288228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87785. 103575.]\n", + " [ 87914. 103575.]\n", + " [ 87914. 103730.]\n", + " [ 87785. 103730.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231288228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87785. 103575.]\n", + " [ 87914. 103575.]\n", + " [ 87914. 103730.]\n", + " [ 87785. 103730.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231288228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87785. 103575.]\n", + " [ 87914. 103575.]\n", + " [ 87914. 103730.]\n", + " [ 87785. 103730.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231288228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87785. 103575.]\n", + " [ 87914. 103575.]\n", + " [ 87914. 103730.]\n", + " [ 87785. 103730.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231288228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87785. 103575.]\n", + " [ 87914. 103575.]\n", + " [ 87914. 103730.]\n", + " [ 87785. 103730.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231295228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87777. 103803.]\n", + " [ 87862. 103803.]\n", + " [ 87862. 103900.]\n", + " [ 87777. 103900.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231295228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87777. 103803.]\n", + " [ 87862. 103803.]\n", + " [ 87862. 103900.]\n", + " [ 87777. 103900.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231295228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87777. 103803.]\n", + " [ 87862. 103803.]\n", + " [ 87862. 103900.]\n", + " [ 87777. 103900.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231295228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87777. 103803.]\n", + " [ 87862. 103803.]\n", + " [ 87862. 103900.]\n", + " [ 87777. 103900.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231295228lymphocytic_blastLymphoblast('15433008', 'SCT')[[ 87777. 103803.]\n", + " [ 87862. 103803.]\n", + " [ 87862. 103900.]\n", + " [ 87777. 103900.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231298228smudge_cellSmudge cell('34717007', 'SCT')[[ 87979. 103854.]\n", + " [ 88144. 103854.]\n", + " [ 88144. 104000.]\n", + " [ 87979. 104000.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231298228smudge_cellSmudge cell('34717007', 'SCT')[[ 87979. 103854.]\n", + " [ 88144. 103854.]\n", + " [ 88144. 104000.]\n", + " [ 87979. 104000.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231298228smudge_cellSmudge cell('34717007', 'SCT')[[ 87979. 103854.]\n", + " [ 88144. 103854.]\n", + " [ 88144. 104000.]\n", + " [ 87979. 104000.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231298228smudge_cellSmudge cell('34717007', 'SCT')[[ 87979. 103854.]\n", + " [ 88144. 103854.]\n", + " [ 88144. 104000.]\n", + " [ 87979. 104000.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231298228smudge_cellSmudge cell('34717007', 'SCT')[[ 87979. 103854.]\n", + " [ 88144. 103854.]\n", + " [ 88144. 104000.]\n", + " [ 87979. 104000.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231305228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87739. 103166.]\n", + " [ 87860. 103166.]\n", + " [ 87860. 103289.]\n", + " [ 87739. 103289.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231305228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87739. 103166.]\n", + " [ 87860. 103166.]\n", + " [ 87860. 103289.]\n", + " [ 87739. 103289.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231305228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87739. 103166.]\n", + " [ 87860. 103166.]\n", + " [ 87860. 103289.]\n", + " [ 87739. 103289.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231305228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87739. 103166.]\n", + " [ 87860. 103166.]\n", + " [ 87860. 103289.]\n", + " [ 87739. 103289.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10000458259578156824372970041815666Session 231305228no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87739. 103166.]\n", + " [ 87860. 103166.]\n", + " [ 87860. 103289.]\n", + " [ 87739. 103289.]]1.2.826.0.1.3680043.8.498.344630678307845905595816254691137746871.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215137artifactArtifact('47973001', 'SCT')[[ 67400. 181709.]\n", + " [ 67473. 181709.]\n", + " [ 67473. 181792.]\n", + " [ 67400. 181792.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215137artifactArtifact('47973001', 'SCT')[[ 67400. 181709.]\n", + " [ 67473. 181709.]\n", + " [ 67473. 181792.]\n", + " [ 67400. 181792.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215137artifactArtifact('47973001', 'SCT')[[ 67400. 181709.]\n", + " [ 67473. 181709.]\n", + " [ 67473. 181792.]\n", + " [ 67400. 181792.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215137artifactArtifact('47973001', 'SCT')[[ 67400. 181709.]\n", + " [ 67473. 181709.]\n", + " [ 67473. 181792.]\n", + " [ 67400. 181792.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215137artifactArtifact('47973001', 'SCT')[[ 67400. 181709.]\n", + " [ 67473. 181709.]\n", + " [ 67473. 181792.]\n", + " [ 67400. 181792.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215187damaged_cellDamage('37782003', 'SCT')[[ 67349. 181965.]\n", + " [ 67479. 181965.]\n", + " [ 67479. 182099.]\n", + " [ 67349. 182099.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215187damaged_cellDamage('37782003', 'SCT')[[ 67349. 181965.]\n", + " [ 67479. 181965.]\n", + " [ 67479. 182099.]\n", + " [ 67349. 182099.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215187damaged_cellDamage('37782003', 'SCT')[[ 67349. 181965.]\n", + " [ 67479. 181965.]\n", + " [ 67479. 182099.]\n", + " [ 67349. 182099.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215187damaged_cellDamage('37782003', 'SCT')[[ 67349. 181965.]\n", + " [ 67479. 181965.]\n", + " [ 67479. 182099.]\n", + " [ 67349. 182099.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215187damaged_cellDamage('37782003', 'SCT')[[ 67349. 181965.]\n", + " [ 67479. 181965.]\n", + " [ 67479. 182099.]\n", + " [ 67349. 182099.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215197no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67463. 181988.]\n", + " [ 67607. 181988.]\n", + " [ 67607. 182118.]\n", + " [ 67463. 182118.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67285. 182160.]\n", + " [ 67416. 182160.]\n", + " [ 67416. 182299.]\n", + " [ 67285. 182299.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67285. 182160.]\n", + " [ 67416. 182160.]\n", + " [ 67416. 182299.]\n", + " [ 67285. 182299.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67285. 182160.]\n", + " [ 67416. 182160.]\n", + " [ 67416. 182299.]\n", + " [ 67285. 182299.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67285. 182160.]\n", + " [ 67416. 182160.]\n", + " [ 67416. 182299.]\n", + " [ 67285. 182299.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67285. 182160.]\n", + " [ 67416. 182160.]\n", + " [ 67416. 182299.]\n", + " [ 67285. 182299.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215437neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67736. 182589.]\n", + " [ 67864. 182589.]\n", + " [ 67864. 182733.]\n", + " [ 67736. 182733.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215437neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67736. 182589.]\n", + " [ 67864. 182589.]\n", + " [ 67864. 182733.]\n", + " [ 67736. 182733.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215437neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67736. 182589.]\n", + " [ 67864. 182589.]\n", + " [ 67864. 182733.]\n", + " [ 67736. 182733.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215437neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67736. 182589.]\n", + " [ 67864. 182589.]\n", + " [ 67864. 182733.]\n", + " [ 67736. 182733.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215437neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67736. 182589.]\n", + " [ 67864. 182589.]\n", + " [ 67864. 182733.]\n", + " [ 67736. 182733.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215507no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68088. 182004.]\n", + " [ 68231. 182004.]\n", + " [ 68231. 182168.]\n", + " [ 68088. 182168.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215507no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68088. 182004.]\n", + " [ 68231. 182004.]\n", + " [ 68231. 182168.]\n", + " [ 68088. 182168.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215507no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68088. 182004.]\n", + " [ 68231. 182004.]\n", + " [ 68231. 182168.]\n", + " [ 68088. 182168.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215507no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68088. 182004.]\n", + " [ 68231. 182004.]\n", + " [ 68231. 182168.]\n", + " [ 68088. 182168.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215507no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68088. 182004.]\n", + " [ 68231. 182004.]\n", + " [ 68231. 182168.]\n", + " [ 68088. 182168.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215537no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68431. 181909.]\n", + " [ 68591. 181909.]\n", + " [ 68591. 182093.]\n", + " [ 68431. 182093.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215567no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68660. 181928.]\n", + " [ 68781. 181928.]\n", + " [ 68781. 182130.]\n", + " [ 68660. 182130.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215567no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68660. 181928.]\n", + " [ 68781. 181928.]\n", + " [ 68781. 182130.]\n", + " [ 68660. 182130.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215567no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68660. 181928.]\n", + " [ 68781. 181928.]\n", + " [ 68781. 182130.]\n", + " [ 68660. 182130.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215567no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68660. 181928.]\n", + " [ 68781. 181928.]\n", + " [ 68781. 182130.]\n", + " [ 68660. 182130.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215567no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68660. 181928.]\n", + " [ 68781. 181928.]\n", + " [ 68781. 182130.]\n", + " [ 68660. 182130.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215687no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68306. 182094.]\n", + " [ 68444. 182094.]\n", + " [ 68444. 182222.]\n", + " [ 68306. 182222.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215687no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68306. 182094.]\n", + " [ 68444. 182094.]\n", + " [ 68444. 182222.]\n", + " [ 68306. 182222.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215687no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68306. 182094.]\n", + " [ 68444. 182094.]\n", + " [ 68444. 182222.]\n", + " [ 68306. 182222.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215687no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68306. 182094.]\n", + " [ 68444. 182094.]\n", + " [ 68444. 182222.]\n", + " [ 68306. 182222.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215687no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68306. 182094.]\n", + " [ 68444. 182094.]\n", + " [ 68444. 182222.]\n", + " [ 68306. 182222.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215757no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68777. 181933.]\n", + " [ 68918. 181933.]\n", + " [ 68918. 182102.]\n", + " [ 68777. 182102.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215757no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68777. 181933.]\n", + " [ 68918. 181933.]\n", + " [ 68918. 182102.]\n", + " [ 68777. 182102.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215757no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68777. 181933.]\n", + " [ 68918. 181933.]\n", + " [ 68918. 182102.]\n", + " [ 68777. 182102.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215757no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68777. 181933.]\n", + " [ 68918. 181933.]\n", + " [ 68918. 182102.]\n", + " [ 68777. 182102.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215757no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68777. 181933.]\n", + " [ 68918. 181933.]\n", + " [ 68918. 182102.]\n", + " [ 68777. 182102.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215777segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68855. 181900.]\n", + " [ 69003. 181900.]\n", + " [ 69003. 182014.]\n", + " [ 68855. 182014.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215777segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68855. 181900.]\n", + " [ 69003. 181900.]\n", + " [ 69003. 182014.]\n", + " [ 68855. 182014.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215777segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68855. 181900.]\n", + " [ 69003. 181900.]\n", + " [ 69003. 182014.]\n", + " [ 68855. 182014.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215777segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68855. 181900.]\n", + " [ 69003. 181900.]\n", + " [ 69003. 182014.]\n", + " [ 68855. 182014.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 215777segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68855. 181900.]\n", + " [ 69003. 181900.]\n", + " [ 69003. 182014.]\n", + " [ 68855. 182014.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216017neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68545. 182363.]\n", + " [ 68676. 182363.]\n", + " [ 68676. 182510.]\n", + " [ 68545. 182510.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216017neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68545. 182363.]\n", + " [ 68676. 182363.]\n", + " [ 68676. 182510.]\n", + " [ 68545. 182510.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216017neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68545. 182363.]\n", + " [ 68676. 182363.]\n", + " [ 68676. 182510.]\n", + " [ 68545. 182510.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216017neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68545. 182363.]\n", + " [ 68676. 182363.]\n", + " [ 68676. 182510.]\n", + " [ 68545. 182510.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216017neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68545. 182363.]\n", + " [ 68676. 182363.]\n", + " [ 68676. 182510.]\n", + " [ 68545. 182510.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216057technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68663. 182518.]\n", + " [ 68772. 182518.]\n", + " [ 68772. 182631.]\n", + " [ 68663. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216057technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68663. 182518.]\n", + " [ 68772. 182518.]\n", + " [ 68772. 182631.]\n", + " [ 68663. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216057technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68663. 182518.]\n", + " [ 68772. 182518.]\n", + " [ 68772. 182631.]\n", + " [ 68663. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216057technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68663. 182518.]\n", + " [ 68772. 182518.]\n", + " [ 68772. 182631.]\n", + " [ 68663. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216057technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68663. 182518.]\n", + " [ 68772. 182518.]\n", + " [ 68772. 182631.]\n", + " [ 68663. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216087neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 68374. 182492.]\n", + " [ 68493. 182492.]\n", + " [ 68493. 182592.]\n", + " [ 68374. 182592.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216087neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 68374. 182492.]\n", + " [ 68493. 182492.]\n", + " [ 68493. 182592.]\n", + " [ 68374. 182592.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216087neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 68374. 182492.]\n", + " [ 68493. 182492.]\n", + " [ 68493. 182592.]\n", + " [ 68374. 182592.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216087neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 68374. 182492.]\n", + " [ 68493. 182492.]\n", + " [ 68493. 182592.]\n", + " [ 68374. 182592.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216087neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 68374. 182492.]\n", + " [ 68493. 182492.]\n", + " [ 68493. 182592.]\n", + " [ 68374. 182592.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216097segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68281. 182494.]\n", + " [ 68380. 182494.]\n", + " [ 68380. 182631.]\n", + " [ 68281. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216097segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68281. 182494.]\n", + " [ 68380. 182494.]\n", + " [ 68380. 182631.]\n", + " [ 68281. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216097segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68281. 182494.]\n", + " [ 68380. 182494.]\n", + " [ 68380. 182631.]\n", + " [ 68281. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216097segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68281. 182494.]\n", + " [ 68380. 182494.]\n", + " [ 68380. 182631.]\n", + " [ 68281. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216097segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 68281. 182494.]\n", + " [ 68380. 182494.]\n", + " [ 68380. 182631.]\n", + " [ 68281. 182631.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216137neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68140. 182518.]\n", + " [ 68292. 182518.]\n", + " [ 68292. 182668.]\n", + " [ 68140. 182668.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216137neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68140. 182518.]\n", + " [ 68292. 182518.]\n", + " [ 68292. 182668.]\n", + " [ 68140. 182668.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216137neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68140. 182518.]\n", + " [ 68292. 182518.]\n", + " [ 68292. 182668.]\n", + " [ 68140. 182668.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216137neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68140. 182518.]\n", + " [ 68292. 182518.]\n", + " [ 68292. 182668.]\n", + " [ 68140. 182668.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216137neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68140. 182518.]\n", + " [ 68292. 182518.]\n", + " [ 68292. 182668.]\n", + " [ 68140. 182668.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216167neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68144. 182667.]\n", + " [ 68255. 182667.]\n", + " [ 68255. 182791.]\n", + " [ 68144. 182791.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216167neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68144. 182667.]\n", + " [ 68255. 182667.]\n", + " [ 68255. 182791.]\n", + " [ 68144. 182791.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216167neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68144. 182667.]\n", + " [ 68255. 182667.]\n", + " [ 68255. 182791.]\n", + " [ 68144. 182791.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216167neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68144. 182667.]\n", + " [ 68255. 182667.]\n", + " [ 68255. 182791.]\n", + " [ 68144. 182791.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216167neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68144. 182667.]\n", + " [ 68255. 182667.]\n", + " [ 68255. 182791.]\n", + " [ 68144. 182791.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216197neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67865. 182698.]\n", + " [ 68004. 182698.]\n", + " [ 68004. 182845.]\n", + " [ 67865. 182845.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216197neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67865. 182698.]\n", + " [ 68004. 182698.]\n", + " [ 68004. 182845.]\n", + " [ 67865. 182845.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216197neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67865. 182698.]\n", + " [ 68004. 182698.]\n", + " [ 68004. 182845.]\n", + " [ 67865. 182845.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216197neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67865. 182698.]\n", + " [ 68004. 182698.]\n", + " [ 68004. 182845.]\n", + " [ 67865. 182845.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216197neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67865. 182698.]\n", + " [ 68004. 182698.]\n", + " [ 68004. 182845.]\n", + " [ 67865. 182845.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216247smudge_cellSmudge cell('34717007', 'SCT')[[ 67642. 182864.]\n", + " [ 67778. 182864.]\n", + " [ 67778. 183027.]\n", + " [ 67642. 183027.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216247smudge_cellSmudge cell('34717007', 'SCT')[[ 67642. 182864.]\n", + " [ 67778. 182864.]\n", + " [ 67778. 183027.]\n", + " [ 67642. 183027.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216247smudge_cellSmudge cell('34717007', 'SCT')[[ 67642. 182864.]\n", + " [ 67778. 182864.]\n", + " [ 67778. 183027.]\n", + " [ 67642. 183027.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216247smudge_cellSmudge cell('34717007', 'SCT')[[ 67642. 182864.]\n", + " [ 67778. 182864.]\n", + " [ 67778. 183027.]\n", + " [ 67642. 183027.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216247smudge_cellSmudge cell('34717007', 'SCT')[[ 67642. 182864.]\n", + " [ 67778. 182864.]\n", + " [ 67778. 183027.]\n", + " [ 67642. 183027.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67732. 182966.]\n", + " [ 67889. 182966.]\n", + " [ 67889. 183138.]\n", + " [ 67732. 183138.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67732. 182966.]\n", + " [ 67889. 182966.]\n", + " [ 67889. 183138.]\n", + " [ 67732. 183138.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67732. 182966.]\n", + " [ 67889. 182966.]\n", + " [ 67889. 183138.]\n", + " [ 67732. 183138.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67732. 182966.]\n", + " [ 67889. 182966.]\n", + " [ 67889. 183138.]\n", + " [ 67732. 183138.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216257neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 67732. 182966.]\n", + " [ 67889. 182966.]\n", + " [ 67889. 183138.]\n", + " [ 67732. 183138.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216397neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67920. 183366.]\n", + " [ 68042. 183366.]\n", + " [ 68042. 183516.]\n", + " [ 67920. 183516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216397neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67920. 183366.]\n", + " [ 68042. 183366.]\n", + " [ 68042. 183516.]\n", + " [ 67920. 183516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216397neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67920. 183366.]\n", + " [ 68042. 183366.]\n", + " [ 68042. 183516.]\n", + " [ 67920. 183516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216397neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67920. 183366.]\n", + " [ 68042. 183366.]\n", + " [ 68042. 183516.]\n", + " [ 67920. 183516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216397neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 67920. 183366.]\n", + " [ 68042. 183366.]\n", + " [ 68042. 183516.]\n", + " [ 67920. 183516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216447no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 67903. 183726.]\n", + " [ 68035. 183726.]\n", + " [ 68035. 183850.]\n", + " [ 67903. 183850.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216497neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68084. 183545.]\n", + " [ 68225. 183545.]\n", + " [ 68225. 183681.]\n", + " [ 68084. 183681.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216497neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68084. 183545.]\n", + " [ 68225. 183545.]\n", + " [ 68225. 183681.]\n", + " [ 68084. 183681.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216497neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68084. 183545.]\n", + " [ 68225. 183545.]\n", + " [ 68225. 183681.]\n", + " [ 68084. 183681.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216497neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68084. 183545.]\n", + " [ 68225. 183545.]\n", + " [ 68225. 183681.]\n", + " [ 68084. 183681.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216497neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68084. 183545.]\n", + " [ 68225. 183545.]\n", + " [ 68225. 183681.]\n", + " [ 68084. 183681.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216577technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68114. 183120.]\n", + " [ 68276. 183120.]\n", + " [ 68276. 183265.]\n", + " [ 68114. 183265.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216577technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68114. 183120.]\n", + " [ 68276. 183120.]\n", + " [ 68276. 183265.]\n", + " [ 68114. 183265.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216577technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68114. 183120.]\n", + " [ 68276. 183120.]\n", + " [ 68276. 183265.]\n", + " [ 68114. 183265.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216577technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68114. 183120.]\n", + " [ 68276. 183120.]\n", + " [ 68276. 183265.]\n", + " [ 68114. 183265.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216577technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 68114. 183120.]\n", + " [ 68276. 183120.]\n", + " [ 68276. 183265.]\n", + " [ 68114. 183265.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216797promyelocytePromyelocyte('43446009', 'SCT')[[ 69025. 183743.]\n", + " [ 69189. 183743.]\n", + " [ 69189. 183906.]\n", + " [ 69025. 183906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216797promyelocytePromyelocyte('43446009', 'SCT')[[ 69025. 183743.]\n", + " [ 69189. 183743.]\n", + " [ 69189. 183906.]\n", + " [ 69025. 183906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216797promyelocytePromyelocyte('43446009', 'SCT')[[ 69025. 183743.]\n", + " [ 69189. 183743.]\n", + " [ 69189. 183906.]\n", + " [ 69025. 183906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216797promyelocytePromyelocyte('43446009', 'SCT')[[ 69025. 183743.]\n", + " [ 69189. 183743.]\n", + " [ 69189. 183906.]\n", + " [ 69025. 183906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216797promyelocytePromyelocyte('43446009', 'SCT')[[ 69025. 183743.]\n", + " [ 69189. 183743.]\n", + " [ 69189. 183906.]\n", + " [ 69025. 183906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216907neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68806. 183164.]\n", + " [ 68940. 183164.]\n", + " [ 68940. 183298.]\n", + " [ 68806. 183298.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216907neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68806. 183164.]\n", + " [ 68940. 183164.]\n", + " [ 68940. 183298.]\n", + " [ 68806. 183298.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216907neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68806. 183164.]\n", + " [ 68940. 183164.]\n", + " [ 68940. 183298.]\n", + " [ 68806. 183298.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216907neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68806. 183164.]\n", + " [ 68940. 183164.]\n", + " [ 68940. 183298.]\n", + " [ 68806. 183298.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216907neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 68806. 183164.]\n", + " [ 68940. 183164.]\n", + " [ 68940. 183298.]\n", + " [ 68806. 183298.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216917neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69010. 183067.]\n", + " [ 69138. 183067.]\n", + " [ 69138. 183182.]\n", + " [ 69010. 183182.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216917neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69010. 183067.]\n", + " [ 69138. 183067.]\n", + " [ 69138. 183182.]\n", + " [ 69010. 183182.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216917neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69010. 183067.]\n", + " [ 69138. 183067.]\n", + " [ 69138. 183182.]\n", + " [ 69010. 183182.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216917neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69010. 183067.]\n", + " [ 69138. 183067.]\n", + " [ 69138. 183182.]\n", + " [ 69010. 183182.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216917neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69010. 183067.]\n", + " [ 69138. 183067.]\n", + " [ 69138. 183182.]\n", + " [ 69010. 183182.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216947degranulated_neutrophilic_metamyelocyteNeutrophil with Cytoplasmic Hypogranularity('C37174', 'NCIt')[[ 68661. 182955.]\n", + " [ 68831. 182955.]\n", + " [ 68831. 183105.]\n", + " [ 68661. 183105.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216947degranulated_neutrophilic_metamyelocyteNeutrophil with Cytoplasmic Hypogranularity('C37174', 'NCIt')[[ 68661. 182955.]\n", + " [ 68831. 182955.]\n", + " [ 68831. 183105.]\n", + " [ 68661. 183105.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216947degranulated_neutrophilic_metamyelocyteNeutrophil with Cytoplasmic Hypogranularity('C37174', 'NCIt')[[ 68661. 182955.]\n", + " [ 68831. 182955.]\n", + " [ 68831. 183105.]\n", + " [ 68661. 183105.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216947degranulated_neutrophilic_metamyelocyteNeutrophil with Cytoplasmic Hypogranularity('C37174', 'NCIt')[[ 68661. 182955.]\n", + " [ 68831. 182955.]\n", + " [ 68831. 183105.]\n", + " [ 68661. 183105.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216947degranulated_neutrophilic_metamyelocyteNeutrophil with Cytoplasmic Hypogranularity('C37174', 'NCIt')[[ 68661. 182955.]\n", + " [ 68831. 182955.]\n", + " [ 68831. 183105.]\n", + " [ 68661. 183105.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216977neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69000. 182919.]\n", + " [ 69142. 182919.]\n", + " [ 69142. 183069.]\n", + " [ 69000. 183069.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216977neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69000. 182919.]\n", + " [ 69142. 182919.]\n", + " [ 69142. 183069.]\n", + " [ 69000. 183069.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216977neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69000. 182919.]\n", + " [ 69142. 182919.]\n", + " [ 69142. 183069.]\n", + " [ 69000. 183069.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216977neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69000. 182919.]\n", + " [ 69142. 182919.]\n", + " [ 69142. 183069.]\n", + " [ 69000. 183069.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 216977neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 69000. 182919.]\n", + " [ 69142. 182919.]\n", + " [ 69142. 183069.]\n", + " [ 69000. 183069.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217017no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69022. 182609.]\n", + " [ 69154. 182609.]\n", + " [ 69154. 182762.]\n", + " [ 69022. 182762.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217017no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69022. 182609.]\n", + " [ 69154. 182609.]\n", + " [ 69154. 182762.]\n", + " [ 69022. 182762.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217017no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69022. 182609.]\n", + " [ 69154. 182609.]\n", + " [ 69154. 182762.]\n", + " [ 69022. 182762.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217017no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69022. 182609.]\n", + " [ 69154. 182609.]\n", + " [ 69154. 182762.]\n", + " [ 69022. 182762.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217017no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69022. 182609.]\n", + " [ 69154. 182609.]\n", + " [ 69154. 182762.]\n", + " [ 69022. 182762.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217027technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 69114. 182658.]\n", + " [ 69202. 182658.]\n", + " [ 69202. 182800.]\n", + " [ 69114. 182800.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217027technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 69114. 182658.]\n", + " [ 69202. 182658.]\n", + " [ 69202. 182800.]\n", + " [ 69114. 182800.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217027technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 69114. 182658.]\n", + " [ 69202. 182658.]\n", + " [ 69202. 182800.]\n", + " [ 69114. 182800.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217027technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 69114. 182658.]\n", + " [ 69202. 182658.]\n", + " [ 69202. 182800.]\n", + " [ 69114. 182800.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217027technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 69114. 182658.]\n", + " [ 69202. 182658.]\n", + " [ 69202. 182800.]\n", + " [ 69114. 182800.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217057no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69125. 182473.]\n", + " [ 69283. 182473.]\n", + " [ 69283. 182618.]\n", + " [ 69125. 182618.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217057no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69125. 182473.]\n", + " [ 69283. 182473.]\n", + " [ 69283. 182618.]\n", + " [ 69125. 182618.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217057no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69125. 182473.]\n", + " [ 69283. 182473.]\n", + " [ 69283. 182618.]\n", + " [ 69125. 182618.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217057no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69125. 182473.]\n", + " [ 69283. 182473.]\n", + " [ 69283. 182618.]\n", + " [ 69125. 182618.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217057no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 69125. 182473.]\n", + " [ 69283. 182473.]\n", + " [ 69283. 182618.]\n", + " [ 69125. 182618.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147unknown_blastBlast cell('312256009', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147unknown_blastBlast cell('312256009', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147unknown_blastBlast cell('312256009', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147unknown_blastBlast cell('312256009', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217147unknown_blastBlast cell('312256009', 'SCT')[[ 68699. 182652.]\n", + " [ 68812. 182652.]\n", + " [ 68812. 182787.]\n", + " [ 68699. 182787.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217167neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68782. 182750.]\n", + " [ 68918. 182750.]\n", + " [ 68918. 182895.]\n", + " [ 68782. 182895.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217167neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68782. 182750.]\n", + " [ 68918. 182750.]\n", + " [ 68918. 182895.]\n", + " [ 68782. 182895.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217167neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68782. 182750.]\n", + " [ 68918. 182750.]\n", + " [ 68918. 182895.]\n", + " [ 68782. 182895.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217167neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68782. 182750.]\n", + " [ 68918. 182750.]\n", + " [ 68918. 182895.]\n", + " [ 68782. 182895.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217167neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 68782. 182750.]\n", + " [ 68918. 182750.]\n", + " [ 68918. 182895.]\n", + " [ 68782. 182895.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217258segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 85708. 188364.]\n", + " [ 85807. 188364.]\n", + " [ 85807. 188441.]\n", + " [ 85708. 188441.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217258segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 85708. 188364.]\n", + " [ 85807. 188364.]\n", + " [ 85807. 188441.]\n", + " [ 85708. 188441.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217258segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 85708. 188364.]\n", + " [ 85807. 188364.]\n", + " [ 85807. 188441.]\n", + " [ 85708. 188441.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217258segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 85708. 188364.]\n", + " [ 85807. 188364.]\n", + " [ 85807. 188441.]\n", + " [ 85708. 188441.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217258segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 85708. 188364.]\n", + " [ 85807. 188364.]\n", + " [ 85807. 188441.]\n", + " [ 85708. 188441.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217318technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 85587. 188448.]\n", + " [ 85735. 188448.]\n", + " [ 85735. 188593.]\n", + " [ 85587. 188593.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217318technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 85587. 188448.]\n", + " [ 85735. 188448.]\n", + " [ 85735. 188593.]\n", + " [ 85587. 188593.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217318technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 85587. 188448.]\n", + " [ 85735. 188448.]\n", + " [ 85735. 188593.]\n", + " [ 85587. 188593.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217318technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 85587. 188448.]\n", + " [ 85735. 188448.]\n", + " [ 85735. 188593.]\n", + " [ 85587. 188593.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217318technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 85587. 188448.]\n", + " [ 85735. 188448.]\n", + " [ 85735. 188593.]\n", + " [ 85587. 188593.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217368no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85688. 188769.]\n", + " [ 85787. 188769.]\n", + " [ 85787. 188917.]\n", + " [ 85688. 188917.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217368no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85688. 188769.]\n", + " [ 85787. 188769.]\n", + " [ 85787. 188917.]\n", + " [ 85688. 188917.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217368no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85688. 188769.]\n", + " [ 85787. 188769.]\n", + " [ 85787. 188917.]\n", + " [ 85688. 188917.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217368no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85688. 188769.]\n", + " [ 85787. 188769.]\n", + " [ 85787. 188917.]\n", + " [ 85688. 188917.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217368no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85688. 188769.]\n", + " [ 85787. 188769.]\n", + " [ 85787. 188917.]\n", + " [ 85688. 188917.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217448neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86080. 188420.]\n", + " [ 86250. 188420.]\n", + " [ 86250. 188565.]\n", + " [ 86080. 188565.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217448neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86080. 188420.]\n", + " [ 86250. 188420.]\n", + " [ 86250. 188565.]\n", + " [ 86080. 188565.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217448neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86080. 188420.]\n", + " [ 86250. 188420.]\n", + " [ 86250. 188565.]\n", + " [ 86080. 188565.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217448neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86080. 188420.]\n", + " [ 86250. 188420.]\n", + " [ 86250. 188565.]\n", + " [ 86080. 188565.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217448neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86080. 188420.]\n", + " [ 86250. 188420.]\n", + " [ 86250. 188565.]\n", + " [ 86080. 188565.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217468segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 86222. 188255.]\n", + " [ 86360. 188255.]\n", + " [ 86360. 188387.]\n", + " [ 86222. 188387.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217468segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 86222. 188255.]\n", + " [ 86360. 188255.]\n", + " [ 86360. 188387.]\n", + " [ 86222. 188387.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217468segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 86222. 188255.]\n", + " [ 86360. 188255.]\n", + " [ 86360. 188387.]\n", + " [ 86222. 188387.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217468segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 86222. 188255.]\n", + " [ 86360. 188255.]\n", + " [ 86360. 188387.]\n", + " [ 86222. 188387.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217468segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 86222. 188255.]\n", + " [ 86360. 188255.]\n", + " [ 86360. 188387.]\n", + " [ 86222. 188387.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217608no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86757. 188470.]\n", + " [ 86799. 188470.]\n", + " [ 86799. 188516.]\n", + " [ 86757. 188516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217608no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86757. 188470.]\n", + " [ 86799. 188470.]\n", + " [ 86799. 188516.]\n", + " [ 86757. 188516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217608no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86757. 188470.]\n", + " [ 86799. 188470.]\n", + " [ 86799. 188516.]\n", + " [ 86757. 188516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217608no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86757. 188470.]\n", + " [ 86799. 188470.]\n", + " [ 86799. 188516.]\n", + " [ 86757. 188516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217608no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86757. 188470.]\n", + " [ 86799. 188470.]\n", + " [ 86799. 188516.]\n", + " [ 86757. 188516.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217618damaged_cellDamage('37782003', 'SCT')[[ 86928. 188120.]\n", + " [ 87058. 188120.]\n", + " [ 87058. 188398.]\n", + " [ 86928. 188398.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217618damaged_cellDamage('37782003', 'SCT')[[ 86928. 188120.]\n", + " [ 87058. 188120.]\n", + " [ 87058. 188398.]\n", + " [ 86928. 188398.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217618damaged_cellDamage('37782003', 'SCT')[[ 86928. 188120.]\n", + " [ 87058. 188120.]\n", + " [ 87058. 188398.]\n", + " [ 86928. 188398.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217618damaged_cellDamage('37782003', 'SCT')[[ 86928. 188120.]\n", + " [ 87058. 188120.]\n", + " [ 87058. 188398.]\n", + " [ 86928. 188398.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217618damaged_cellDamage('37782003', 'SCT')[[ 86928. 188120.]\n", + " [ 87058. 188120.]\n", + " [ 87058. 188398.]\n", + " [ 86928. 188398.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217798proerythroblastProerythroblast('16671004', 'SCT')[[ 86920. 188710.]\n", + " [ 87088. 188710.]\n", + " [ 87088. 188848.]\n", + " [ 86920. 188848.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217798proerythroblastProerythroblast('16671004', 'SCT')[[ 86920. 188710.]\n", + " [ 87088. 188710.]\n", + " [ 87088. 188848.]\n", + " [ 86920. 188848.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217798proerythroblastProerythroblast('16671004', 'SCT')[[ 86920. 188710.]\n", + " [ 87088. 188710.]\n", + " [ 87088. 188848.]\n", + " [ 86920. 188848.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217798proerythroblastProerythroblast('16671004', 'SCT')[[ 86920. 188710.]\n", + " [ 87088. 188710.]\n", + " [ 87088. 188848.]\n", + " [ 86920. 188848.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217798proerythroblastProerythroblast('16671004', 'SCT')[[ 86920. 188710.]\n", + " [ 87088. 188710.]\n", + " [ 87088. 188848.]\n", + " [ 86920. 188848.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217828segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 87275. 188747.]\n", + " [ 87366. 188747.]\n", + " [ 87366. 188830.]\n", + " [ 87275. 188830.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217828segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 87275. 188747.]\n", + " [ 87366. 188747.]\n", + " [ 87366. 188830.]\n", + " [ 87275. 188830.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217828segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 87275. 188747.]\n", + " [ 87366. 188747.]\n", + " [ 87366. 188830.]\n", + " [ 87275. 188830.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217828segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 87275. 188747.]\n", + " [ 87366. 188747.]\n", + " [ 87366. 188830.]\n", + " [ 87275. 188830.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217828segmented_neutrophilSegmented neutrophil('80153006', 'SCT')[[ 87275. 188747.]\n", + " [ 87366. 188747.]\n", + " [ 87366. 188830.]\n", + " [ 87275. 188830.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217918neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86888. 188844.]\n", + " [ 87066. 188844.]\n", + " [ 87066. 189031.]\n", + " [ 86888. 189031.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217918neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86888. 188844.]\n", + " [ 87066. 188844.]\n", + " [ 87066. 189031.]\n", + " [ 86888. 189031.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217918neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86888. 188844.]\n", + " [ 87066. 188844.]\n", + " [ 87066. 189031.]\n", + " [ 86888. 189031.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217918neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86888. 188844.]\n", + " [ 87066. 188844.]\n", + " [ 87066. 189031.]\n", + " [ 86888. 189031.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217918neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86888. 188844.]\n", + " [ 87066. 188844.]\n", + " [ 87066. 189031.]\n", + " [ 86888. 189031.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217968no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85701. 189069.]\n", + " [ 85824. 189069.]\n", + " [ 85824. 189209.]\n", + " [ 85701. 189209.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217968no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85701. 189069.]\n", + " [ 85824. 189069.]\n", + " [ 85824. 189209.]\n", + " [ 85701. 189209.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217968no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85701. 189069.]\n", + " [ 85824. 189069.]\n", + " [ 85824. 189209.]\n", + " [ 85701. 189209.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217968no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85701. 189069.]\n", + " [ 85824. 189069.]\n", + " [ 85824. 189209.]\n", + " [ 85701. 189209.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217968no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85701. 189069.]\n", + " [ 85824. 189069.]\n", + " [ 85824. 189209.]\n", + " [ 85701. 189209.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217998no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85995. 188774.]\n", + " [ 86144. 188774.]\n", + " [ 86144. 188944.]\n", + " [ 85995. 188944.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217998no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85995. 188774.]\n", + " [ 86144. 188774.]\n", + " [ 86144. 188944.]\n", + " [ 85995. 188944.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217998no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85995. 188774.]\n", + " [ 86144. 188774.]\n", + " [ 86144. 188944.]\n", + " [ 85995. 188944.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217998no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85995. 188774.]\n", + " [ 86144. 188774.]\n", + " [ 86144. 188944.]\n", + " [ 85995. 188944.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 217998no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85995. 188774.]\n", + " [ 86144. 188774.]\n", + " [ 86144. 188944.]\n", + " [ 85995. 188944.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218028neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 86227. 188743.]\n", + " [ 86351. 188743.]\n", + " [ 86351. 188867.]\n", + " [ 86227. 188867.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218028neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 86227. 188743.]\n", + " [ 86351. 188743.]\n", + " [ 86351. 188867.]\n", + " [ 86227. 188867.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218028neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 86227. 188743.]\n", + " [ 86351. 188743.]\n", + " [ 86351. 188867.]\n", + " [ 86227. 188867.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218028neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 86227. 188743.]\n", + " [ 86351. 188743.]\n", + " [ 86351. 188867.]\n", + " [ 86227. 188867.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218028neutrophilic_metamyelocyteNeutrophilic metamyelocyte('50134008', 'SCT')[[ 86227. 188743.]\n", + " [ 86351. 188743.]\n", + " [ 86351. 188867.]\n", + " [ 86227. 188867.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218158neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 86168. 188898.]\n", + " [ 86277. 188898.]\n", + " [ 86277. 189056.]\n", + " [ 86168. 189056.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218158neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 86168. 188898.]\n", + " [ 86277. 188898.]\n", + " [ 86277. 189056.]\n", + " [ 86168. 189056.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218158neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 86168. 188898.]\n", + " [ 86277. 188898.]\n", + " [ 86277. 189056.]\n", + " [ 86168. 189056.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218158neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 86168. 188898.]\n", + " [ 86277. 188898.]\n", + " [ 86277. 189056.]\n", + " [ 86168. 189056.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218158neutrophilic_bandBand neutrophil('702697008', 'SCT')[[ 86168. 188898.]\n", + " [ 86277. 188898.]\n", + " [ 86277. 189056.]\n", + " [ 86168. 189056.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218168no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86274. 188854.]\n", + " [ 86385. 188854.]\n", + " [ 86385. 189028.]\n", + " [ 86274. 189028.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218168no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86274. 188854.]\n", + " [ 86385. 188854.]\n", + " [ 86385. 189028.]\n", + " [ 86274. 189028.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218168no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86274. 188854.]\n", + " [ 86385. 188854.]\n", + " [ 86385. 189028.]\n", + " [ 86274. 189028.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218168no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86274. 188854.]\n", + " [ 86385. 188854.]\n", + " [ 86385. 189028.]\n", + " [ 86274. 189028.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218168no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86274. 188854.]\n", + " [ 86385. 188854.]\n", + " [ 86385. 189028.]\n", + " [ 86274. 189028.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218188neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86340. 189000.]\n", + " [ 86450. 189000.]\n", + " [ 86450. 189112.]\n", + " [ 86340. 189112.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218188neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86340. 189000.]\n", + " [ 86450. 189000.]\n", + " [ 86450. 189112.]\n", + " [ 86340. 189112.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218188neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86340. 189000.]\n", + " [ 86450. 189000.]\n", + " [ 86450. 189112.]\n", + " [ 86340. 189112.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218188neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86340. 189000.]\n", + " [ 86450. 189000.]\n", + " [ 86450. 189112.]\n", + " [ 86340. 189112.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218188neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86340. 189000.]\n", + " [ 86450. 189000.]\n", + " [ 86450. 189112.]\n", + " [ 86340. 189112.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218208degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 86355. 188767.]\n", + " [ 86487. 188767.]\n", + " [ 86487. 188906.]\n", + " [ 86355. 188906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218208degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 86355. 188767.]\n", + " [ 86487. 188767.]\n", + " [ 86487. 188906.]\n", + " [ 86355. 188906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218208degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 86355. 188767.]\n", + " [ 86487. 188767.]\n", + " [ 86487. 188906.]\n", + " [ 86355. 188906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218208degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 86355. 188767.]\n", + " [ 86487. 188767.]\n", + " [ 86487. 188906.]\n", + " [ 86355. 188906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218208degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 86355. 188767.]\n", + " [ 86487. 188767.]\n", + " [ 86487. 188906.]\n", + " [ 86355. 188906.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218348neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86331. 189713.]\n", + " [ 86467. 189713.]\n", + " [ 86467. 189857.]\n", + " [ 86331. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218348neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86331. 189713.]\n", + " [ 86467. 189713.]\n", + " [ 86467. 189857.]\n", + " [ 86331. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218348neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86331. 189713.]\n", + " [ 86467. 189713.]\n", + " [ 86467. 189857.]\n", + " [ 86331. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218348neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86331. 189713.]\n", + " [ 86467. 189713.]\n", + " [ 86467. 189857.]\n", + " [ 86331. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218348neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86331. 189713.]\n", + " [ 86467. 189713.]\n", + " [ 86467. 189857.]\n", + " [ 86331. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218358technically_unfitUnusable - Quality renders image unusable('111235', 'DCM')[[ 86437. 189648.]\n", + " [ 86554. 189648.]\n", + " [ 86554. 189789.]\n", + " [ 86437. 189789.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218398neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86502. 189700.]\n", + " [ 86649. 189700.]\n", + " [ 86649. 189857.]\n", + " [ 86502. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218398neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86502. 189700.]\n", + " [ 86649. 189700.]\n", + " [ 86649. 189857.]\n", + " [ 86502. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218398neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86502. 189700.]\n", + " [ 86649. 189700.]\n", + " [ 86649. 189857.]\n", + " [ 86502. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218398neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86502. 189700.]\n", + " [ 86649. 189700.]\n", + " [ 86649. 189857.]\n", + " [ 86502. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218398neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 86502. 189700.]\n", + " [ 86649. 189700.]\n", + " [ 86649. 189857.]\n", + " [ 86502. 189857.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218618no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85601. 190161.]\n", + " [ 85775. 190161.]\n", + " [ 85775. 190320.]\n", + " [ 85601. 190320.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218618no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85601. 190161.]\n", + " [ 85775. 190161.]\n", + " [ 85775. 190320.]\n", + " [ 85601. 190320.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218618no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85601. 190161.]\n", + " [ 85775. 190161.]\n", + " [ 85775. 190320.]\n", + " [ 85601. 190320.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218618no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85601. 190161.]\n", + " [ 85775. 190161.]\n", + " [ 85775. 190320.]\n", + " [ 85601. 190320.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218618no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85601. 190161.]\n", + " [ 85775. 190161.]\n", + " [ 85775. 190320.]\n", + " [ 85601. 190320.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218828no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86889. 189289.]\n", + " [ 87040. 189289.]\n", + " [ 87040. 189432.]\n", + " [ 86889. 189432.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218828no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86889. 189289.]\n", + " [ 87040. 189289.]\n", + " [ 87040. 189432.]\n", + " [ 86889. 189432.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218828no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86889. 189289.]\n", + " [ 87040. 189289.]\n", + " [ 87040. 189432.]\n", + " [ 86889. 189432.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218828no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86889. 189289.]\n", + " [ 87040. 189289.]\n", + " [ 87040. 189432.]\n", + " [ 86889. 189432.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 218828no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 86889. 189289.]\n", + " [ 87040. 189289.]\n", + " [ 87040. 189432.]\n", + " [ 86889. 189432.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219028neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 87144. 189623.]\n", + " [ 87306. 189623.]\n", + " [ 87306. 189781.]\n", + " [ 87144. 189781.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219028neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 87144. 189623.]\n", + " [ 87306. 189623.]\n", + " [ 87306. 189781.]\n", + " [ 87144. 189781.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219028neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 87144. 189623.]\n", + " [ 87306. 189623.]\n", + " [ 87306. 189781.]\n", + " [ 87144. 189781.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219028neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 87144. 189623.]\n", + " [ 87306. 189623.]\n", + " [ 87306. 189781.]\n", + " [ 87144. 189781.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219028neutrophilic_myelocyteNeutrophilic myelocyte('4717004', 'SCT')[[ 87144. 189623.]\n", + " [ 87306. 189623.]\n", + " [ 87306. 189781.]\n", + " [ 87144. 189781.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219118no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87225. 190020.]\n", + " [ 87365. 190020.]\n", + " [ 87365. 190132.]\n", + " [ 87225. 190132.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219118no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87225. 190020.]\n", + " [ 87365. 190020.]\n", + " [ 87365. 190132.]\n", + " [ 87225. 190132.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219118no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87225. 190020.]\n", + " [ 87365. 190020.]\n", + " [ 87365. 190132.]\n", + " [ 87225. 190132.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219118no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87225. 190020.]\n", + " [ 87365. 190020.]\n", + " [ 87365. 190132.]\n", + " [ 87225. 190132.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219118no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87225. 190020.]\n", + " [ 87365. 190020.]\n", + " [ 87365. 190132.]\n", + " [ 87225. 190132.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219188no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87185. 190232.]\n", + " [ 87375. 190232.]\n", + " [ 87375. 190361.]\n", + " [ 87185. 190361.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219188no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87185. 190232.]\n", + " [ 87375. 190232.]\n", + " [ 87375. 190361.]\n", + " [ 87185. 190361.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219188no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87185. 190232.]\n", + " [ 87375. 190232.]\n", + " [ 87375. 190361.]\n", + " [ 87185. 190361.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219188no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87185. 190232.]\n", + " [ 87375. 190232.]\n", + " [ 87375. 190361.]\n", + " [ 87185. 190361.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219188no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 87185. 190232.]\n", + " [ 87375. 190232.]\n", + " [ 87375. 190361.]\n", + " [ 87185. 190361.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219218degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 87240. 190298.]\n", + " [ 87425. 190298.]\n", + " [ 87425. 190473.]\n", + " [ 87240. 190473.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219218degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 87240. 190298.]\n", + " [ 87425. 190298.]\n", + " [ 87425. 190473.]\n", + " [ 87240. 190473.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219218degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 87240. 190298.]\n", + " [ 87425. 190298.]\n", + " [ 87425. 190473.]\n", + " [ 87240. 190473.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219218degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 87240. 190298.]\n", + " [ 87425. 190298.]\n", + " [ 87425. 190473.]\n", + " [ 87240. 190473.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219218degranulated_neutrophilic_myelocyteHypogranular white blood cell('250292003', 'SCT')[[ 87240. 190298.]\n", + " [ 87425. 190298.]\n", + " [ 87425. 190473.]\n", + " [ 87240. 190473.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268damaged_cellDamage('37782003', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268damaged_cellDamage('37782003', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268damaged_cellDamage('37782003', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268damaged_cellDamage('37782003', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268damaged_cellDamage('37782003', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219268no_consensus_foundStructure of haematological system('414387006', 'SCT')[[ 85642. 189293.]\n", + " [ 85691. 189293.]\n", + " [ 85691. 189370.]\n", + " [ 85642. 189370.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219398damaged_cellDamage('37782003', 'SCT')[[ 87191. 189280.]\n", + " [ 87377. 189280.]\n", + " [ 87377. 189493.]\n", + " [ 87191. 189493.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219398damaged_cellDamage('37782003', 'SCT')[[ 87191. 189280.]\n", + " [ 87377. 189280.]\n", + " [ 87377. 189493.]\n", + " [ 87191. 189493.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219398damaged_cellDamage('37782003', 'SCT')[[ 87191. 189280.]\n", + " [ 87377. 189280.]\n", + " [ 87377. 189493.]\n", + " [ 87191. 189493.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219398damaged_cellDamage('37782003', 'SCT')[[ 87191. 189280.]\n", + " [ 87377. 189280.]\n", + " [ 87377. 189493.]\n", + " [ 87191. 189493.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
1.2.826.0.1.3680043.10.511.3.10038390733944282042123343426373413Session 219398damaged_cellDamage('37782003', 'SCT')[[ 87191. 189280.]\n", + " [ 87377. 189280.]\n", + " [ 87377. 189493.]\n", + " [ 87191. 189493.]]1.2.826.0.1.3680043.8.498.826925794001878559469589635736574010711.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384
\n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "# This code will run longer as you increase the number of ANN files to be processed\n", + "labeled_cells = get_cell_annotations(subset='labeled', ann_to_process=10)\n", + "sorted_cell_labels = labeled_cells.sort_values(by=['reference_SOPInstanceUID', 'cell_id', 'annotation_session'])\n", + "display(sorted_cell_labels.style.hide(axis='index')) # don't show row index" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "eKSnU4dyXkiR" + }, + "source": [ + "## How to use the `BoneMarrowWSI-PediatricLeukemia` annotations\n", + "The `BoneMarrowWSI-PediatricLeukemia` collection stands out due to the extensive amount of information contained in its annotations. More than 40000 cells are annotated with bounding boxes suitable for training **cell detection models**, 28000 of those additionally received expert-generated class labels for **cell type classification** tasks. Particularly noteworthy is the uncertainty information embedded in the consensus labelling process, giving insight into which cell types are particularly challenging to determine or easy to confuse with others.\n", + "In the cell below, we catch some of those cases:" + ] + }, + { + "cell_type": "code", + "execution_count": 33, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 422 + }, + "id": "v2qI9zT4t76Z", + "outputId": "d3b1fb80-93c6-429c-e346-6ee117e8742c" + }, + "outputs": [ + { + "data": { + "application/vnd.google.colaboratory.intrinsic+json": { + "summary": "{\n \"name\": \"display(grouped_cell_labels[uncertain])\",\n \"rows\": 7,\n \"fields\": [\n {\n \"column\": \"cell_id\",\n \"properties\": {\n \"dtype\": \"number\",\n \"std\": 11083,\n \"min\": 1519,\n \"max\": 31020,\n \"num_unique_values\": 7,\n \"samples\": [\n 1519,\n 1553,\n 1926\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"cell_label\",\n \"properties\": {\n \"dtype\": \"object\",\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"cell_label_code_scheme\",\n \"properties\": {\n \"dtype\": \"object\",\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"reference_SOPInstanceUID\",\n \"properties\": {\n \"dtype\": \"category\",\n \"num_unique_values\": 2,\n \"samples\": [\n \"1.2.826.0.1.3680043.8.498.17910403824742244732861652278168977445\",\n \"1.2.826.0.1.3680043.8.498.80225091671086795258165123210450280384\"\n ],\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n },\n {\n \"column\": \"cell_coordinates\",\n \"properties\": {\n \"dtype\": \"object\",\n \"semantic_type\": \"\",\n \"description\": \"\"\n }\n }\n ]\n}", + "type": "dataframe" + }, + "text/html": [ + "\n", + "
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cell_labelcell_label_code_schemereference_SOPInstanceUIDcell_coordinates
cell_id
1519[Band neutrophil, Structure of haematological ...[(702697008, SCT), (414387006, SCT), (70269700...1.2.826.0.1.3680043.8.498.80225091671086795258...[[67463.0, 181988.0], [67607.0, 181988.0], [67...
1553[Hypogranular white blood cell, Structure of h...[(250292003, SCT), (414387006, SCT), (25029200...1.2.826.0.1.3680043.8.498.80225091671086795258...[[68431.0, 181909.0], [68591.0, 181909.0], [68...
1644[Hypogranular white blood cell, Structure of h...[(250292003, SCT), (414387006, SCT), (25029200...1.2.826.0.1.3680043.8.498.80225091671086795258...[[67903.0, 183726.0], [68035.0, 183726.0], [68...
1714[Structure of haematological system, Blast cel...[(414387006, SCT), (312256009, SCT), (41438700...1.2.826.0.1.3680043.8.498.80225091671086795258...[[68699.0, 182652.0], [68812.0, 182652.0], [68...
1835[Structure of haematological system, Unusable ...[(414387006, SCT), (111235, DCM), (414387006, ...1.2.826.0.1.3680043.8.498.80225091671086795258...[[86437.0, 189648.0], [86554.0, 189648.0], [86...
1926[Damage, Structure of haematological system, D...[(37782003, SCT), (414387006, SCT), (37782003,...1.2.826.0.1.3680043.8.498.80225091671086795258...[[85642.0, 189293.0], [85691.0, 189293.0], [85...
31020[Structure of haematological system, Blast cel...[(414387006, SCT), (312256009, SCT), (41438700...1.2.826.0.1.3680043.8.498.17910403824742244732...[[85184.0, 77287.0], [85337.0, 77287.0], [8533...
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\n" + ], + "text/plain": [ + " cell_label \\\n", + "cell_id \n", + "1519 [Band neutrophil, Structure of haematological ... \n", + "1553 [Hypogranular white blood cell, Structure of h... \n", + "1644 [Hypogranular white blood cell, Structure of h... \n", + "1714 [Structure of haematological system, Blast cel... \n", + "1835 [Structure of haematological system, Unusable ... \n", + "1926 [Damage, Structure of haematological system, D... \n", + "31020 [Structure of haematological system, Blast cel... \n", + "\n", + " cell_label_code_scheme \\\n", + "cell_id \n", + "1519 [(702697008, SCT), (414387006, SCT), (70269700... \n", + "1553 [(250292003, SCT), (414387006, SCT), (25029200... \n", + "1644 [(250292003, SCT), (414387006, SCT), (25029200... \n", + "1714 [(414387006, SCT), (312256009, SCT), (41438700... \n", + "1835 [(414387006, SCT), (111235, DCM), (414387006, ... \n", + "1926 [(37782003, SCT), (414387006, SCT), (37782003,... \n", + "31020 [(414387006, SCT), (312256009, SCT), (41438700... \n", + "\n", + " reference_SOPInstanceUID \\\n", + "cell_id \n", + "1519 1.2.826.0.1.3680043.8.498.80225091671086795258... \n", + "1553 1.2.826.0.1.3680043.8.498.80225091671086795258... \n", + "1644 1.2.826.0.1.3680043.8.498.80225091671086795258... \n", + "1714 1.2.826.0.1.3680043.8.498.80225091671086795258... \n", + "1835 1.2.826.0.1.3680043.8.498.80225091671086795258... \n", + "1926 1.2.826.0.1.3680043.8.498.80225091671086795258... \n", + "31020 1.2.826.0.1.3680043.8.498.17910403824742244732... \n", + "\n", + " cell_coordinates \n", + "cell_id \n", + "1519 [[67463.0, 181988.0], [67607.0, 181988.0], [67... \n", + "1553 [[68431.0, 181909.0], [68591.0, 181909.0], [68... \n", + "1644 [[67903.0, 183726.0], [68035.0, 183726.0], [68... \n", + "1714 [[68699.0, 182652.0], [68812.0, 182652.0], [68... \n", + "1835 [[86437.0, 189648.0], [86554.0, 189648.0], [86... \n", + "1926 [[85642.0, 189293.0], [85691.0, 189293.0], [85... \n", + "31020 [[85184.0, 77287.0], [85337.0, 77287.0], [8533... " + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "grouped_cell_labels = sorted_cell_labels.groupby('cell_id').agg({'cell_label': list, 'cell_label_code_scheme': list,\n", + " 'reference_SOPInstanceUID': 'first',\n", + " 'cell_coordinates': 'first'})\n", + "uncertain = grouped_cell_labels['cell_label'].apply(lambda x: len(set(x)) > 1)\n", + "display(grouped_cell_labels[uncertain])" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "id": "ytLhTIcF23lu" + }, + "source": [ + "# Next steps\n", + "\n", + "Share your feedback or ask questions about this notebook in IDC Forum: https://discourse.canceridc.dev.\n", + "\n", + "If you are interested in tissue type annotations or want to learn about DICOM Structured Reporting, you can take a look at [this notebook](https://github.com/ImagingDataCommons/IDC-Tutorials/blob/master/notebooks/collections_demos/rms_mutation_prediction/RMS-Mutation-Prediction-Expert-Annotations_exploration.ipynb) navigating expert-generated region annotations for rhabdomyosarcoma tumor slides." + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## Support\n", + "\n", + "If you have any questions about this notebook, please post your question on the [IDC User Forum](https://discourse.canceridc.dev) or [open an issue](https://github.com/ImagingDataCommons/IDC-Tutorials/issues/new) in the [IDC Tutorials repository](https://github.com/ImagingDataCommons/IDC-Tutorials)." + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## Acknowledgments\n", + "\n", + "Imaging Data Commons has been funded in whole or in part with Federal funds from the National Cancer Institute, National Institutes of Health, under Task Order No. HHSN26110071 under Contract No. HHSN261201500003I.\n", + "\n", + "If you use IDC in your research, please cite the following publication:\n", + "\n", + "> Fedorov, A., Longabaugh, W. J. R., Pot, D., Clunie, D. A., Pieper, S. D., Gibbs, D. L., Bridge, C., Herrmann, M. D., Homeyer, A., Lewis, R., Aerts, H. J. W., Krishnaswamy, D., Thiriveedhi, V. K., Ciausu, C., Schacherer, D. P., Bontempi, D., Pihl, T., Wagner, U., Farahani, K., Kim, E. & Kikinis, R. _National Cancer Institute Imaging Data Commons: Toward Transparency, Reproducibility, and Scalability in Imaging Artificial Intelligence_. RadioGraphics (2023). [https://doi.org/10.1148/rg.230180](https://doi.org/10.1148/rg.230180)" + ] + } + ], + "metadata": { + "colab": { + "provenance": [], + "toc_visible": true + }, + "kernelspec": { + "display_name": "Python 3", + "name": "python3" + }, + "language_info": { + "name": "python" + } + }, + "nbformat": 4, + "nbformat_minor": 0 +}