diff --git a/.github/workflows/build_and_test.yaml b/.github/workflows/build_and_test.yaml
index d6376d9..28c70f4 100644
--- a/.github/workflows/build_and_test.yaml
+++ b/.github/workflows/build_and_test.yaml
@@ -84,13 +84,8 @@ jobs:
       # ────────────────────────────────────────────────────────────────
       # Pytest checks
       # ────────────────────────────────────────────────────────────────
-      - name: Install Pixi Python deps
-        run: |
-          pixi --version
-          pixi install
-
       - name: Run pytest checks on HDF5 output
-        run: pixi run pytest
+        run: pixi run -e dashboard pytest
 
       - uses: actions/upload-artifact@v4
         if: failure()
diff --git a/.github/workflows/build_and_test_mac.yaml b/.github/workflows/build_and_test_mac.yaml
index 54ab86d..5161bb3 100644
--- a/.github/workflows/build_and_test_mac.yaml
+++ b/.github/workflows/build_and_test_mac.yaml
@@ -88,13 +88,8 @@ jobs:
       # ────────────────────────────────────────────────────────────────
       # Pytest checks
       # ────────────────────────────────────────────────────────────────
-      - name: Install Pixi Python deps
-        run: |
-          pixi --version
-          pixi install
-
       - name: Run pytest checks on HDF5 output
-        run: pixi run pytest
+        run: pixi run -e dashboard pytest
 
       - uses: actions/upload-artifact@v4
         if: failure()
diff --git a/.github/workflows/pixi_build.yaml b/.github/workflows/pixi_build.yaml
index 42ca06a..30128f8 100644
--- a/.github/workflows/pixi_build.yaml
+++ b/.github/workflows/pixi_build.yaml
@@ -14,12 +14,10 @@ jobs:
   build:
     name: ${{ matrix.os }}
     runs-on: ${{ matrix.os }}
-    env:
-      FANS_BUILD_DIR: build
     strategy:
       fail-fast: false
       matrix:
-        os: [macos-latest, ubuntu-latest]
+        os: [ubuntu-latest]
     steps:
       - name: Checkout code
         uses: actions/checkout@v5
@@ -32,6 +30,12 @@ jobs:
       - name: Run pytest checks on HDF5 output
         run: pixi run test
 
+      - name: Upload test logs
+        uses: actions/upload-artifact@v4
+        with:
+          name: test-logs
+          path: test/*.log
+
       - uses: actions/upload-artifact@v4
         if: failure()
         with:
diff --git a/.gitignore b/.gitignore
index bee6bdb..3c49bcc 100644
--- a/.gitignore
+++ b/.gitignore
@@ -210,3 +210,4 @@ test/input_files/**/*.json
 # pixi environments
 .pixi
 *.egg-info
+*.conda
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 57a1e11..b8cc9ba 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,6 +2,8 @@
 
 ## latest
 
+- Introduce pixi build workflow and conftest.py for pytest-fixture [#82](https://github.com/DataAnalyticsEngineering/FANS/pull/82)
+- Use dashboard environment for regular pytest [#81](https://github.com/DataAnalyticsEngineering/FANS/pull/81)
 - Fix bug in J2 plasticity routine [#80](https://github.com/DataAnalyticsEngineering/FANS/pull/80)
 
 ## v0.4.2
diff --git a/pixi.lock b/pixi.lock
index 205ba92..287a477 100644
--- a/pixi.lock
+++ b/pixi.lock
@@ -361,8 +361,10 @@ environments:
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       - conda: https://conda.anaconda.org/conda-forge/noarch/_python_abi3_support-1.0-hd8ed1ab_2.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/asttokens-3.0.0-pyhd8ed1ab_1.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/attr-2.5.2-h39aace5_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/beartype-0.21.0-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-hda65f42_8.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.34.5-hb9d3cd8_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/ca-certificates-2025.8.3-hbd8a1cb_0.conda
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       - conda: https://conda.anaconda.org/conda-forge/noarch/cfgv-3.3.1-pyhd8ed1ab_1.conda
@@ -374,9 +376,12 @@ environments:
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       - conda: https://conda.anaconda.org/conda-forge/noarch/executing-2.2.1-pyhd8ed1ab_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/fftw-3.3.10-mpi_openmpi_h99e62ba_10.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/filelock-3.19.1-pyhd8ed1ab_0.conda
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       - conda: https://conda.anaconda.org/conda-forge/linux-64/gmpy2-2.2.1-py313h86d8783_1.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/hdf5-1.14.6-mpi_openmpi_h4fb29d0_3.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/icu-75.1-he02047a_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/identify-2.6.14-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/importlib-metadata-8.7.0-pyhe01879c_1.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/iniconfig-2.0.0-pyhd8ed1ab_1.conda
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       - conda: https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.44-h1423503_1.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/libaec-1.1.4-h3f801dc_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-35_h4a7cf45_openblas.conda
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       - conda: https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-35_h0358290_openblas.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.14.1-h332b0f4_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20250104-pl5321h7949ede_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-hd590300_2.conda
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       - conda: https://conda.anaconda.org/conda-forge/linux-64/libexpat-2.7.1-hecca717_0.conda
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       - conda: https://conda.anaconda.org/conda-forge/linux-64/mpfr-4.2.1-h90cbb55_3.conda
+      - conda: https://conda.anaconda.org/conda-forge/noarch/mpi-1.0.1-openmpi.conda
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       - conda: https://conda.anaconda.org/conda-forge/linux-64/numpy-2.3.3-py313hf6604e3_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/openmpi-5.0.8-h2fe1745_106.conda
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       - conda: https://conda.anaconda.org/conda-forge/linux-64/quaternion-2024.0.12-py313h29aa505_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/rdma-core-59.0-hecca717_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/readline-8.2-h8c095d6_2.conda
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@@ -450,12 +479,17 @@ environments:
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       - conda: https://conda.anaconda.org/conda-forge/noarch/tzdata-2025b-h78e105d_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/ucc-1.5.1-hb729f83_0.conda
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       - conda: https://conda.anaconda.org/conda-forge/noarch/zipp-3.23.0-pyhd8ed1ab_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.7-hb8e6e7a_2.conda
+      - conda: .
+        build: hcf062d0_0
       - pypi: https://files.pythonhosted.org/packages/77/06/bb80f5f86020c4551da315d78b3ab75e8228f89f0162f2c3a819e407941a/attrs-25.3.0-py3-none-any.whl
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       - conda: https://conda.anaconda.org/conda-forge/osx-64/bzip2-1.0.8-h500dc9f_8.conda
+      - conda: https://conda.anaconda.org/conda-forge/osx-64/c-ares-1.34.5-hf13058a_0.conda
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+  - libfabric1 >=1.14.0
+  - libzlib >=1.3.1,<2.0a0
+  - libevent >=2.1.12,<2.1.13.0a0
+  - libhwloc >=2.12.1,<2.12.2.0a0
+  constrains:
+  - libprrte ==0.0.0
+  license: BSD-3-Clause
+  license_family: BSD
+  purls: []
+  size: 2584142
+  timestamp: 1755660817009
 - conda: https://conda.anaconda.org/conda-forge/linux-64/openssl-3.5.3-h26f9b46_0.conda
   sha256: 8c313f79fd9408f53922441fbb4e38f065e2251840f86862f05bdf613da7980f
   md5: 72b3dd72e4f0b88cdacf3421313480f0
@@ -3021,6 +3971,21 @@ packages:
   - pkg:pypi/numpy-quaternion?source=hash-mapping
   size: 79383
   timestamp: 1757403636001
+- conda: https://conda.anaconda.org/conda-forge/linux-64/rdma-core-59.0-hecca717_0.conda
+  sha256: ce0e671ce8b6151b135eb6b5aea9caed4d4032a416f73a04a3fb29048fd772c3
+  md5: d95e4c5679876a9d3f2211263f75dc9c
+  depends:
+  - __glibc >=2.17,<3.0.a0
+  - libgcc >=14
+  - libnl >=3.11.0,<4.0a0
+  - libstdcxx >=14
+  - libsystemd0 >=257.7
+  - libudev1 >=257.7
+  license: Linux-OpenIB
+  license_family: BSD
+  purls: []
+  size: 1239342
+  timestamp: 1756455670262
 - conda: https://conda.anaconda.org/conda-forge/linux-64/readline-8.2-h8c095d6_2.conda
   sha256: 2d6d0c026902561ed77cd646b5021aef2d4db22e57a5b0178dfc669231e06d2c
   md5: 283b96675859b20a825f8fa30f311446
@@ -3386,6 +4351,41 @@ packages:
   purls: []
   size: 122968
   timestamp: 1742727099393
+- conda: https://conda.anaconda.org/conda-forge/linux-64/ucc-1.5.1-hb729f83_0.conda
+  sha256: 5e7ac8dab660d85ce97b49a6e7baa6fca04e3efc40bc962104956ebf89cd2065
+  md5: a0861f581e2030872d58ddad469045bb
+  depends:
+  - __glibc >=2.17,<3.0.a0
+  - libgcc >=14
+  - libstdcxx >=14
+  - ucx >=1.19.0,<1.19.1.0a0
+  - ucx >=1.19.0,<1.20.0a0
+  constrains:
+  - cuda-version >=12,<13.0a0
+  - nccl >=2.27.7.1,<3.0a0
+  - cuda-cudart
+  license: BSD-3-Clause
+  license_family: BSD
+  purls: []
+  size: 8759974
+  timestamp: 1757986556727
+- conda: https://conda.anaconda.org/conda-forge/linux-64/ucx-1.19.0-hc93acc0_4.conda
+  sha256: 4528c412368614ce2a6c2ce0d9f7d60776e18b39580ba639966e621a002281e2
+  md5: 564583811ab9b11d48f0ed54b5b9da38
+  depends:
+  - __glibc >=2.17,<3.0.a0
+  - _openmp_mutex >=4.5
+  - libgcc >=14
+  - libstdcxx >=14
+  - rdma-core >=59.0
+  constrains:
+  - cuda-cudart
+  - cuda-version >=12,<13.0a0
+  license: BSD-3-Clause
+  license_family: BSD
+  purls: []
+  size: 7710005
+  timestamp: 1757690628596
 - conda: https://conda.anaconda.org/conda-forge/linux-64/ukkonen-1.0.1-py313h33d0bda_5.conda
   sha256: 4edcb6a933bb8c03099ab2136118d5e5c25285e3fd2b0ff0fa781916c53a1fb7
   md5: 5bcffe10a500755da4a71cc0fb62a420
@@ -3542,3 +4542,38 @@ packages:
   - pkg:pypi/zipp?source=hash-mapping
   size: 22963
   timestamp: 1749421737203
+- conda: https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.7-hb8e6e7a_2.conda
+  sha256: a4166e3d8ff4e35932510aaff7aa90772f84b4d07e9f6f83c614cba7ceefe0eb
+  md5: 6432cb5d4ac0046c3ac0a8a0f95842f9
+  depends:
+  - __glibc >=2.17,<3.0.a0
+  - libgcc >=13
+  - libstdcxx >=13
+  - libzlib >=1.3.1,<2.0a0
+  license: BSD-3-Clause
+  license_family: BSD
+  purls: []
+  size: 567578
+  timestamp: 1742433379869
+- conda: https://conda.anaconda.org/conda-forge/osx-64/zstd-1.5.7-h8210216_2.conda
+  sha256: c171c43d0c47eed45085112cb00c8c7d4f0caa5a32d47f2daca727e45fb98dca
+  md5: cd60a4a5a8d6a476b30d8aa4bb49251a
+  depends:
+  - __osx >=10.13
+  - libzlib >=1.3.1,<2.0a0
+  license: BSD-3-Clause
+  license_family: BSD
+  purls: []
+  size: 485754
+  timestamp: 1742433356230
+- conda: https://conda.anaconda.org/conda-forge/osx-arm64/zstd-1.5.7-h6491c7d_2.conda
+  sha256: 0d02046f57f7a1a3feae3e9d1aa2113788311f3cf37a3244c71e61a93177ba67
+  md5: e6f69c7bcccdefa417f056fa593b40f0
+  depends:
+  - __osx >=11.0
+  - libzlib >=1.3.1,<2.0a0
+  license: BSD-3-Clause
+  license_family: BSD
+  purls: []
+  size: 399979
+  timestamp: 1742433432699
diff --git a/pixi.toml b/pixi.toml
index 893c61c..e813622 100644
--- a/pixi.toml
+++ b/pixi.toml
@@ -2,6 +2,10 @@
 channels = ["conda-forge"]
 name = "FANS"
 platforms = ["linux-64", "osx-64", "osx-arm64"]
+preview = ["pixi-build"]
+
+[dependencies]
+fans = { path = "." }
 
 [feature.dashboard.dependencies]
 python = ">=3.13.5,<3.14"
@@ -23,10 +27,44 @@ precommit = "pre-commit run --all-files"
 h52xdmf = { args = ["file"], cmd = "cd \"$INIT_CWD\" && python -m fans_dashboard.plotting.h52xdmf -t -v {{file}}" }
 
 [tasks]
-test = {depends-on = [
-  { task = "pytest", environment = "dashboard" }, # Will be changed later with pixi-build
-]}
+test = { cmd = "pytest -v -s --from-pixi", cwd = "test/pytest", depends-on = ["test-fans"] }
+test-fans = { cmd = "./run_tests.sh -n {{n}}", args = [
+  { arg = "n", default = "2" }, # Number of threads
+], cwd = "test" }
 
 [environments]
 default = {features = ["dashboard"]}
 dashboard = { features = ["dashboard"], no-default-feature = true }
+
+################## Pixi build part
+
+[package]
+name = "fans"
+version = "0.4.2"
+
+[package.build]
+backend = { name = "pixi-build-cmake", version = "0.3.*" }
+
+[package.build.config]
+extra-args = [
+    "-DFANS_LIBRARY_FOR_MICRO_MANAGER=ON",
+    ]
+
+[workspace.target.osx-arm64.build-variants]
+cxx_compiler_version = ["18"]
+
+[workspace.target.linux-64.build-variants]
+cxx_compiler = ["clangxx"]
+cxx_compiler_version = ["18"]
+
+[package.build-dependencies]
+cmake = "==4.0.3"
+pybind11 = "*"
+pkg-config = "*"
+ninja = "1.13.*"
+
+[package.host-dependencies]
+hdf5 = { version = "*", build = "* mpi_openmpi*" }
+fftw = { version = "*", build = "* mpi_openmpi*" } # works
+openmpi-mpicxx = "*"
+eigen = "*"
diff --git a/test/README.md b/test/README.md
index c7361d7..199c75a 100644
--- a/test/README.md
+++ b/test/README.md
@@ -31,7 +31,7 @@ This will run all test cases and generate result files in `build/test/`.
 After running the tests, the results are verified using pytest. We recommend running pytest via a pre-configured Pixi task,
 
 ```bash
-pixi run pytest
+pixi run -e dashboard pytest
 ```
 
 Note: The validation tests expect result files to be in `build/test/` directory, so make sure to run the tests first.
diff --git a/test/pytest/conftest.py b/test/pytest/conftest.py
new file mode 100644
index 0000000..02606f6
--- /dev/null
+++ b/test/pytest/conftest.py
@@ -0,0 +1,43 @@
+import pytest
+import os
+
+
+def pytest_addoption(parser):
+    parser.addoption(
+        "--from-pixi",
+        action="store_true",
+        default=False,
+        help="Run tests from pixi task.",
+    )
+
+
+@pytest.fixture(
+    params=[
+        "test_J2Plasticity",
+        "test_LinearElastic",
+        "test_LinearThermal",
+        "test_PseudoPlastic",
+    ]
+)
+def test_files(request):
+    json_base_dir = os.path.join(
+        os.path.dirname(os.path.abspath(__file__)), "../input_files/"
+    )
+    # Determine the HDF5 base directory based on the --from-pixi option
+    # if run from pixi, use output directory; otherwise, use build/test directory, as it is the one used by ctest
+    if request.config.getoption("--from-pixi"):
+        h5_base_dir = os.path.join(
+            os.path.dirname(os.path.abspath(__file__)), "../output"
+        )
+    else:
+        h5_base_dir = os.path.join(
+            os.path.dirname(os.path.abspath(__file__)), "../../build/test/"
+        )
+
+    json_path = os.path.join(json_base_dir, f"{request.param}.json")
+    h5_path = os.path.join(h5_base_dir, f"{request.param}.h5")
+
+    if os.path.exists(json_path) and os.path.exists(h5_path):
+        return json_path, h5_path
+
+    assert False, f"Required test files not found: {json_path} or {h5_path}"
diff --git a/test/pytest/test_displacement_averaging.py b/test/pytest/test_displacement_averaging.py
index d4c5d1b..58c418c 100644
--- a/test/pytest/test_displacement_averaging.py
+++ b/test/pytest/test_displacement_averaging.py
@@ -5,30 +5,6 @@
 from fans_dashboard.core.utils import identify_hierarchy, extract_and_organize_data
 
 
-@pytest.fixture(
-    params=[
-        "test_J2Plasticity",
-        "test_LinearElastic",
-        "test_LinearThermal",
-        "test_PseudoPlastic",
-    ]
-)
-def test_files(request):
-    json_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../input_files/"
-    )
-    h5_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../../build/test/"
-    )
-
-    json_path = os.path.join(json_base_dir, f"{request.param}.json")
-    h5_path = os.path.join(h5_base_dir, f"{request.param}.h5")
-
-    if os.path.exists(json_path) and os.path.exists(h5_path):
-        return json_path, h5_path
-    pytest.skip(f"Required test files not found: {json_path} or {h5_path}")
-
-
 def test_displacement_averaging(test_files):
     """
     This test verifies that the average of displacement fluctuations is zero for all
diff --git a/test/pytest/test_homogenization_consistency.py b/test/pytest/test_homogenization_consistency.py
index 3232ddb..30a743d 100644
--- a/test/pytest/test_homogenization_consistency.py
+++ b/test/pytest/test_homogenization_consistency.py
@@ -5,30 +5,6 @@
 from fans_dashboard.core.utils import identify_hierarchy, extract_and_organize_data
 
 
-@pytest.fixture(
-    params=[
-        "test_J2Plasticity",
-        "test_LinearElastic",
-        "test_LinearThermal",
-        "test_PseudoPlastic",
-    ]
-)
-def test_files(request):
-    json_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../input_files/"
-    )
-    h5_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../../build/test/"
-    )
-
-    json_path = os.path.join(json_base_dir, f"{request.param}.json")
-    h5_path = os.path.join(h5_base_dir, f"{request.param}.h5")
-
-    if os.path.exists(json_path) and os.path.exists(h5_path):
-        return json_path, h5_path
-    pytest.skip(f"Required test files not found: {json_path} or {h5_path}")
-
-
 def test_homogenization_consistency(test_files):
     """
     This test verifies that the relationship stress_average = homogenized_tangent * strain_average
diff --git a/test/pytest/test_homogenized_tangent_spd.py b/test/pytest/test_homogenized_tangent_spd.py
index d6f9cf5..58c120f 100644
--- a/test/pytest/test_homogenized_tangent_spd.py
+++ b/test/pytest/test_homogenized_tangent_spd.py
@@ -6,30 +6,6 @@
 from scipy.linalg import eigvalsh
 
 
-@pytest.fixture(
-    params=[
-        "test_J2Plasticity",
-        "test_LinearElastic",
-        "test_LinearThermal",
-        "test_PseudoPlastic",
-    ]
-)
-def test_files(request):
-    json_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../input_files/"
-    )
-    h5_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../../build/test/"
-    )
-
-    json_path = os.path.join(json_base_dir, f"{request.param}.json")
-    h5_path = os.path.join(h5_base_dir, f"{request.param}.h5")
-
-    if os.path.exists(json_path) and os.path.exists(h5_path):
-        return json_path, h5_path
-    pytest.skip(f"Required test files not found: {json_path} or {h5_path}")
-
-
 def test_homogenized_tangent_spd(test_files):
     """
     This test verifies that the homogenized tangent is strictly Symmetric Positive Definite (SPD)
diff --git a/test/pytest/test_homogenized_tangent_within_VRbounds.py b/test/pytest/test_homogenized_tangent_within_VRbounds.py
index 2652516..3983c78 100644
--- a/test/pytest/test_homogenized_tangent_within_VRbounds.py
+++ b/test/pytest/test_homogenized_tangent_within_VRbounds.py
@@ -11,30 +11,6 @@
 )
 
 
-@pytest.fixture(
-    params=[
-        "test_J2Plasticity",
-        "test_LinearElastic",
-        "test_LinearThermal",
-        "test_PseudoPlastic",
-    ]
-)
-def test_files(request):
-    json_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../input_files/"
-    )
-    h5_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../../build/test/"
-    )
-
-    json_path = os.path.join(json_base_dir, f"{request.param}.json")
-    h5_path = os.path.join(h5_base_dir, f"{request.param}.h5")
-
-    if os.path.exists(json_path) and os.path.exists(h5_path):
-        return json_path, h5_path
-    pytest.skip(f"Required test files not found: {json_path} or {h5_path}")
-
-
 def test_homogenized_tangent_within_VRbounds(test_files):
     """
     This test verifies that the homogenized tangent is within Voigt and Reuss bounds
diff --git a/test/pytest/test_loading_to_strain_average.py b/test/pytest/test_loading_to_strain_average.py
index 124355e..14d31c0 100644
--- a/test/pytest/test_loading_to_strain_average.py
+++ b/test/pytest/test_loading_to_strain_average.py
@@ -5,30 +5,6 @@
 from fans_dashboard.core.utils import identify_hierarchy, extract_and_organize_data
 
 
-@pytest.fixture(
-    params=[
-        "test_J2Plasticity",
-        "test_LinearElastic",
-        "test_LinearThermal",
-        "test_PseudoPlastic",
-    ]
-)
-def test_files(request):
-    json_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../input_files/"
-    )
-    h5_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../../build/test/"
-    )
-
-    json_path = os.path.join(json_base_dir, f"{request.param}.json")
-    h5_path = os.path.join(h5_base_dir, f"{request.param}.h5")
-
-    if os.path.exists(json_path) and os.path.exists(h5_path):
-        return json_path, h5_path
-    pytest.skip(f"Required test files not found: {json_path} or {h5_path}")
-
-
 def test_loading_to_strain_average(test_files):
     """
     This test verifies that the strain_average field in the results matches the macroscale_loading
diff --git a/test/pytest/test_strain_stress_averaging.py b/test/pytest/test_strain_stress_averaging.py
index 6ecf14c..ec22edb 100644
--- a/test/pytest/test_strain_stress_averaging.py
+++ b/test/pytest/test_strain_stress_averaging.py
@@ -5,30 +5,6 @@
 from fans_dashboard.core.utils import identify_hierarchy, extract_and_organize_data
 
 
-@pytest.fixture(
-    params=[
-        "test_J2Plasticity",
-        "test_LinearElastic",
-        "test_LinearThermal",
-        "test_PseudoPlastic",
-    ]
-)
-def test_files(request):
-    json_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../input_files/"
-    )
-    h5_base_dir = os.path.join(
-        os.path.dirname(os.path.abspath(__file__)), "../../build/test/"
-    )
-
-    json_path = os.path.join(json_base_dir, f"{request.param}.json")
-    h5_path = os.path.join(h5_base_dir, f"{request.param}.h5")
-
-    if os.path.exists(json_path) and os.path.exists(h5_path):
-        return json_path, h5_path
-    pytest.skip(f"Required test files not found: {json_path} or {h5_path}")
-
-
 def test_strain_stress_averaging(test_files):
     """
     This test verifies that the average of strain/stress fields matches the strain_average/stress_average
diff --git a/test/run_tests.sh b/test/run_tests.sh
index a00009e..82f47eb 100755
--- a/test/run_tests.sh
+++ b/test/run_tests.sh
@@ -8,16 +8,25 @@ fi
 
 num_processes=$2
 
+# Select executable depending on whether we're inside a conda/pixi env
+if [ -n "$CONDA_PREFIX" ]; then
+    FANS_EXEC="$CONDA_PREFIX/bin/FANS"
+else
+    FANS_EXEC="./FANS"
+fi
+
 TIME_CMD="command time -v"
 [[ "$OSTYPE" == "darwin"* ]] && TIME_CMD="command gtime -v"
 
+mkdir -p output
+
 # Run the jobs serially
-$TIME_CMD mpiexec -n $num_processes ./FANS input_files/test_LinearThermal.json test_LinearThermal.h5 > test_LinearThermal.log 2>&1
+$TIME_CMD mpiexec -n $num_processes "$FANS_EXEC" input_files/test_LinearThermal.json output/test_LinearThermal.h5 > test_LinearThermal.log 2>&1
 
-$TIME_CMD mpiexec -n $num_processes ./FANS input_files/test_LinearElastic.json test_LinearElastic.h5 > test_LinearElastic.log 2>&1
+$TIME_CMD mpiexec -n $num_processes "$FANS_EXEC" input_files/test_LinearElastic.json output/test_LinearElastic.h5 > test_LinearElastic.log 2>&1
 
-$TIME_CMD mpiexec -n $num_processes ./FANS input_files/test_PseudoPlastic.json test_PseudoPlastic.h5 > test_PseudoPlastic.log 2>&1
+$TIME_CMD mpiexec -n $num_processes "$FANS_EXEC" input_files/test_PseudoPlastic.json output/test_PseudoPlastic.h5 > test_PseudoPlastic.log 2>&1
 
-$TIME_CMD mpiexec -n $num_processes ./FANS input_files/test_J2Plasticity.json test_J2Plasticity.h5 > test_J2Plasticity.log 2>&1
+$TIME_CMD mpiexec -n $num_processes "$FANS_EXEC" input_files/test_J2Plasticity.json output/test_J2Plasticity.h5 > test_J2Plasticity.log 2>&1
 
-$TIME_CMD mpiexec -n $num_processes ./FANS input_files/test_MixedBCs.json test_MixedBCs.h5 > test_MixedBCs.log 2>&1
+$TIME_CMD mpiexec -n $num_processes "$FANS_EXEC" input_files/test_MixedBCs.json output/test_MixedBCs.h5 > test_MixedBCs.log 2>&1