diff --git a/jbrowse/package-lock.json b/jbrowse/package-lock.json
index 044b5e267..c071b13b1 100644
--- a/jbrowse/package-lock.json
+++ b/jbrowse/package-lock.json
@@ -24,8 +24,8 @@
         "child_process": "^1.0.2",
         "fs": "^0.0.1-security",
         "jquery": "^3.7.0",
-        "jspdf": "^2.5.1",
-        "jspdf-autotable": "^3.5.31",
+        "jspdf": "^3.0.0",
+        "jspdf-autotable": "^5.0.2",
         "node-polyfill-webpack-plugin": "2.0.1",
         "path-browserify": "^1.0.1",
         "react": "^18.0.0",
@@ -1586,9 +1586,10 @@
       }
     },
     "node_modules/@babel/runtime": {
-      "version": "7.25.6",
-      "resolved": "https://registry.npmjs.org/@babel/runtime/-/runtime-7.25.6.tgz",
-      "integrity": "sha512-VBj9MYyDb9tuLq7yzqjgzt6Q+IBQLrGZfdjOekyEirZPHxXWoTSGUTMrpsfi58Up73d13NfYLv8HT9vmznjzhQ==",
+      "version": "7.26.10",
+      "resolved": "https://registry.npmjs.org/@babel/runtime/-/runtime-7.26.10.tgz",
+      "integrity": "sha512-2WJMeRQPHKSPemqk/awGrAiuFfzBmOIPXKizAsVhWH9YJqLZ0H+HS4c8loHGgW6utJ3E/ejXQUsiGaQy2NZ9Fw==",
+      "license": "MIT",
       "dependencies": {
         "regenerator-runtime": "^0.14.0"
       },
@@ -3846,6 +3847,13 @@
         "@types/node": "*"
       }
     },
+    "node_modules/@types/trusted-types": {
+      "version": "2.0.7",
+      "resolved": "https://registry.npmjs.org/@types/trusted-types/-/trusted-types-2.0.7.tgz",
+      "integrity": "sha512-ScaPdn1dQczgbl0QFTeTOmVHFULt394XJgOQNoyVhZ6r2vLnMLJfBPd53SB52T/3G36VI1/g2MZaX0cwDuXsfw==",
+      "license": "MIT",
+      "optional": true
+    },
     "node_modules/@types/use-sync-external-store": {
       "version": "0.0.6",
       "resolved": "https://registry.npmjs.org/@types/use-sync-external-store/-/use-sync-external-store-0.0.6.tgz",
@@ -6050,9 +6058,13 @@
       }
     },
     "node_modules/dompurify": {
-      "version": "3.1.6",
-      "resolved": "https://registry.npmjs.org/dompurify/-/dompurify-3.1.6.tgz",
-      "integrity": "sha512-cTOAhc36AalkjtBpfG6O8JimdTMWNXjiePT2xQH/ppBGi/4uIpmj8eKyIkMJErXWARyINV/sB38yf8JCLF5pbQ=="
+      "version": "3.2.4",
+      "resolved": "https://registry.npmjs.org/dompurify/-/dompurify-3.2.4.tgz",
+      "integrity": "sha512-ysFSFEDVduQpyhzAob/kkuJjf5zWkZD8/A9ywSp1byueyuCfHamrCBa14/Oc2iiB0e51B+NpxSl5gmzn+Ms/mg==",
+      "license": "(MPL-2.0 OR Apache-2.0)",
+      "optionalDependencies": {
+        "@types/trusted-types": "^2.0.7"
+      }
     },
     "node_modules/domutils": {
       "version": "2.8.0",
@@ -6452,7 +6464,9 @@
       }
     },
     "node_modules/fflate": {
-      "version": "0.4.8",
+      "version": "0.8.2",
+      "resolved": "https://registry.npmjs.org/fflate/-/fflate-0.8.2.tgz",
+      "integrity": "sha512-cPJU47OaAoCbg0pBvzsgpTPhmhqI5eJjh/JIu8tPj5q+T7iLvW/JAYUqmE7KOB4R1ZyEhzBaIQpQpardBF5z8A==",
       "license": "MIT"
     },
     "node_modules/file-saver": {
@@ -7817,33 +7831,32 @@
       }
     },
     "node_modules/jspdf": {
-      "version": "2.5.1",
+      "version": "3.0.0",
+      "resolved": "https://registry.npmjs.org/jspdf/-/jspdf-3.0.0.tgz",
+      "integrity": "sha512-QvuQZvOI8CjfjVgtajdL0ihrDYif1cN5gXiF9lb9Pd9JOpmocvnNyFO9sdiJ/8RA5Bu8zyGOUjJLj5kiku16ug==",
       "license": "MIT",
       "dependencies": {
-        "@babel/runtime": "^7.14.0",
+        "@babel/runtime": "^7.26.0",
         "atob": "^2.1.2",
         "btoa": "^1.2.1",
-        "fflate": "^0.4.8"
+        "fflate": "^0.8.1"
       },
       "optionalDependencies": {
         "canvg": "^3.0.6",
         "core-js": "^3.6.0",
-        "dompurify": "^2.2.0",
+        "dompurify": "^3.2.4",
         "html2canvas": "^1.0.0-rc.5"
       }
     },
     "node_modules/jspdf-autotable": {
-      "version": "3.8.2",
+      "version": "5.0.2",
+      "resolved": "https://registry.npmjs.org/jspdf-autotable/-/jspdf-autotable-5.0.2.tgz",
+      "integrity": "sha512-YNKeB7qmx3pxOLcNeoqAv3qTS7KuvVwkFe5AduCawpop3NOkBUtqDToxNc225MlNecxT4kP2Zy3z/y/yvGdXUQ==",
       "license": "MIT",
       "peerDependencies": {
-        "jspdf": "^2.5.1"
+        "jspdf": "^2 || ^3"
       }
     },
-    "node_modules/jspdf/node_modules/dompurify": {
-      "version": "2.5.6",
-      "license": "(MPL-2.0 OR Apache-2.0)",
-      "optional": true
-    },
     "node_modules/keycharm": {
       "version": "0.4.0",
       "resolved": "https://registry.npmjs.org/keycharm/-/keycharm-0.4.0.tgz",
diff --git a/jbrowse/package.json b/jbrowse/package.json
index 4fba61e57..457c93ae6 100644
--- a/jbrowse/package.json
+++ b/jbrowse/package.json
@@ -30,8 +30,8 @@
     "child_process": "^1.0.2",
     "fs": "^0.0.1-security",
     "jquery": "^3.7.0",
-    "jspdf": "^2.5.1",
-    "jspdf-autotable": "^3.5.31",
+    "jspdf": "^3.0.0",
+    "jspdf-autotable": "^5.0.2",
     "node-polyfill-webpack-plugin": "2.0.1",
     "path-browserify": "^1.0.1",
     "react": "^18.0.0",