Skip to content

Commit e7e3309

Browse files
bbimberbbimber
committed
Add genetics table
1 parent ccfed34 commit e7e3309

File tree

3 files changed

+65
-0
lines changed

3 files changed

+65
-0
lines changed

‎Studies/resources/queries/study/genetics.query.xml‎

Lines changed: 30 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,30 @@
1+
<query xmlns="http://labkey.org/data/xml/query">
2+
<metadata>
3+
<tables xmlns="http://labkey.org/data/xml">
4+
<table tableName="flags" tableDbType="TABLE" useColumnOrder="true">
5+
<columns>
6+
<column columnName="Id"/>
7+
<column columnName="date">
8+
<columnTitle>Date Added</columnTitle>
9+
<formatString>Date</formatString>
10+
</column>
11+
<column columnName="category">
12+
<columnTitle>Category</columnTitle>
13+
</column>
14+
<column columnName="assayType">
15+
<columnTitle>Assay Type</columnTitle>
16+
</column>
17+
<column columnName="marker">
18+
<columnTitle>Marker/Allele</columnTitle>
19+
</column>
20+
<column columnName="result">
21+
<columnTitle>Result</columnTitle>
22+
</column>
23+
<column columnName="score">
24+
<columnTitle>Score</columnTitle>
25+
</column>
26+
</columns>
27+
</table>
28+
</tables>
29+
</metadata>
30+
</query>

‎Studies/resources/referenceStudy/study/datasets/datasets_manifest.xml‎

Lines changed: 3 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -31,5 +31,8 @@
3131
<dataset name="immunizations" showByDefault="true" category="Research" type="Standard" id="10">
3232
<tags/>
3333
</dataset>
34+
<dataset name="genetics" showByDefault="true" category="Research" type="Standard" id="10">
35+
<tags/>
36+
</dataset>
3437
</datasets>
3538
</datasets>

‎Studies/resources/referenceStudy/study/datasets/datasets_metadata.xml‎

Lines changed: 32 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -334,4 +334,36 @@
334334
</columns>
335335
<tableTitle>Samples</tableTitle>
336336
</table>
337+
<table tableName="genetics" tableDbType="TABLE">
338+
<columns>
339+
<column columnName="Id">
340+
<datatype>varchar</datatype>
341+
<conceptURI>http://cpas.labkey.com/Study#ParticipantId</conceptURI>
342+
</column>
343+
<column columnName="date">
344+
<datatype>timestamp</datatype>
345+
<conceptURI>http://cpas.labkey.com/laboratory#sampleDate</conceptURI>
346+
</column>
347+
<column columnName="objectid">
348+
<datatype>entityid</datatype>
349+
<isKeyField>true</isKeyField>
350+
</column>
351+
<column columnName="category">
352+
<datatype>varchar</datatype>
353+
</column>
354+
<column columnName="assayType">
355+
<datatype>varchar</datatype>
356+
</column>
357+
<column columnName="marker">
358+
<datatype>varchar</datatype>
359+
</column>
360+
<column columnName="result">
361+
<datatype>varchar</datatype>
362+
</column>
363+
<column columnName="score">
364+
<datatype>double</datatype>
365+
</column>
366+
</columns>
367+
<tableTitle>Genetic Data</tableTitle>
368+
</table>
337369
</tables>

0 commit comments

Comments
 (0)